RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 PDXDC1Q6P996 788 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 RBAKQ9NYW8 714 aaPredicted RBP16.24■□□□□ 0.19
ITGB4-206ENST00000579662 LIMA1Q9UHB6 759 aaKnown RBP16.24■□□□□ 0.19
ITGB4-206ENST00000579662 AGO2Q9UKV8 859 aaKnown RBP16.24■□□□□ 0.19
ITGB4-206ENST00000579662 NDUFB10O96000 172 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 ATP6V1E2Q96A05 226 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 SDCCAG3Q96C92 435 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 KIF2CQ99661 725 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 NUP85Q9BW27 656 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 ABCB6Q9NP58 842 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 RIMBP3CA6NJZ7 1639 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 RIMBP3BA6NNM3 1639 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 RIMBP3Q9UFD9 1639 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 CEP170BQ9Y4F5 1589 aaPredicted RBP16.24■□□□□ 0.19
ITGB4-206ENST00000579662 TTC4O95801 387 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 KRT7P08729 469 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 NR1D1P20393 614 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 EPHB1P54762 984 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 ZNF560Q96MR9 790 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 TTC25Q96NG3 672 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 SDC4P31431 198 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 ITPK1Q13572 414 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 ZNF394Q53GI3 561 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 ATG16L1Q676U5 607 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 METTL16Q86W50 562 aaKnown RBP16.24■□□□□ 0.19
ITGB4-206ENST00000579662 FBXL13Q8NEE6 735 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 TRIM9Q9C026 710 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 WNT8AQ9H1J5 351 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 CAPN11Q9UMQ6 739 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 M0QYV0 167 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 GGPS1O95749 300 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 SOX5P35711 763 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 NR1H3Q13133 447 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 EXOC4Q96A65 974 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 TRIM62Q9BVG3 475 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 DGAT1O75907 488 aa16.23■□□□□ 0.19
ITGB4-206ENST00000579662 KRT37O76014 449 aa16.23■□□□□ 0.19
ITGB4-206ENST00000579662 HSPA8P11142 646 aaKnown RBP16.23■□□□□ 0.19
ITGB4-206ENST00000579662 RASA1P20936 1047 aa16.23■□□□□ 0.19
ITGB4-206ENST00000579662 SLC7A5Q01650 507 aa16.23■□□□□ 0.19
ITGB4-206ENST00000579662 KLC3Q6P597 504 aa16.23■□□□□ 0.19
ITGB4-206ENST00000579662 C11orf70Q9BRQ4 267 aa16.23■□□□□ 0.19
ITGB4-206ENST00000579662 GINM1Q9NU53 330 aa16.23■□□□□ 0.19
ITGB4-206ENST00000579662 NFU1Q9UMS0 254 aa16.23■□□□□ 0.19
ITGB4-206ENST00000579662 NOVA2Q9UNW9 492 aaKnown RBP16.23■□□□□ 0.19
ITGB4-206ENST00000579662 RPS12P25398 132 aaKnown RBP16.23■□□□□ 0.19
ITGB4-206ENST00000579662 ARID5BQ14865 1188 aa16.23■□□□□ 0.19
ITGB4-206ENST00000579662 XKR3Q5GH77 459 aa16.23■□□□□ 0.19
ITGB4-206ENST00000579662 TTC19Q6DKK2 380 aaPredicted RBP16.23■□□□□ 0.19
ITGB4-206ENST00000579662 RWDD4Q6NW29 188 aaKnown RBP16.23■□□□□ 0.19
ITGB4-206ENST00000579662 MCUQ8NE86 351 aa16.23■□□□□ 0.19
ITGB4-206ENST00000579662 EPB41L4AQ9HCS5 686 aaPredicted RBP16.23■□□□□ 0.19
ITGB4-206ENST00000579662 CNOT7Q9UIV1 285 aaKnown RBP16.23■□□□□ 0.19
ITGB4-206ENST00000579662 TTC26A0AVF1 554 aa16.23■□□□□ 0.19
ITGB4-206ENST00000579662 LLGL1Q15334 1064 aa16.23■□□□□ 0.19
ITGB4-206ENST00000579662 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.23■□□□□ 0.19
ITGB4-206ENST00000579662 ZNF280CQ8ND82 737 aa16.23■□□□□ 0.19
ITGB4-206ENST00000579662 DCCP43146 1447 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 STXBP3O00186 592 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 DUOXA2Q1HG44 320 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 VCPKMTQ9H867 229 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 TXLNGQ9NUQ3 528 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 ADGRG1Q9Y653 693 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 SLCO1A2P46721 670 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 STAT5BP51692 787 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 PPP6R3Q5H9R7 873 aaPredicted RBP16.22■□□□□ 0.19
ITGB4-206ENST00000579662 SPOPLQ6IQ16 392 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 VPS39Q96JC1 886 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 UBN1Q9NPG3 1134 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 GPR75-ASB3A0A0A6YYF3 556 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 CHRNA3P32297 505 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 LRRC31Q6UY01 552 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 SAAL1Q96ER3 474 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 FAM8A1Q9UBU6 413 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 EMSYQ7Z589 1322 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 BAG2O95816 211 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 HDLBPQ00341 1268 aaKnown RBP16.22■□□□□ 0.19
ITGB4-206ENST00000579662 PASD1Q8IV76 773 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 MIPOL1Q8TD10 442 aa16.22■□□□□ 0.19
ITGB4-206ENST00000579662 DPYDQ12882 1025 aa16.21■□□□□ 0.19
ITGB4-206ENST00000579662 CEP120Q8N960 986 aa16.21■□□□□ 0.19
ITGB4-206ENST00000579662 EPS15L1Q9UBC2 864 aa16.21■□□□□ 0.19
ITGB4-206ENST00000579662 RHOBTB3O94955 611 aa16.21■□□□□ 0.19
ITGB4-206ENST00000579662 PDHBP11177 359 aa16.21■□□□□ 0.19
ITGB4-206ENST00000579662 SH3BGRP55822 239 aaPredicted RBP16.21■□□□□ 0.19
ITGB4-206ENST00000579662 ANTXR2P58335 489 aa16.21■□□□□ 0.19
ITGB4-206ENST00000579662 TAF1BQ53T94 588 aaPredicted RBP16.21■□□□□ 0.19
ITGB4-206ENST00000579662 ANKRD40Q6AI12 368 aa16.21■□□□□ 0.19
ITGB4-206ENST00000579662 XRRA1Q6P2D8 792 aa16.21■□□□□ 0.19
ITGB4-206ENST00000579662 RFFLQ8WZ73 363 aa16.21■□□□□ 0.19
ITGB4-206ENST00000579662 LRRIQ1Q96JM4 1722 aa16.21■□□□□ 0.19
ITGB4-206ENST00000579662 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.21■□□□□ 0.19
ITGB4-206ENST00000579662 SPON1Q9HCB6 807 aa16.21■□□□□ 0.19
ITGB4-206ENST00000579662 SAYSD1Q9NPB0 183 aa16.21■□□□□ 0.19
ITGB4-206ENST00000579662 TBK1Q9UHD2 729 aa16.21■□□□□ 0.19
ITGB4-206ENST00000579662 SNCBQ16143 134 aa16.21■□□□□ 0.19
ITGB4-206ENST00000579662 KLHL38Q2WGJ6 581 aa16.21■□□□□ 0.19
ITGB4-206ENST00000579662 RHOT1Q8IXI2 618 aa16.21■□□□□ 0.19
ITGB4-206ENST00000579662 OSBPL9Q96SU4 736 aa16.21■□□□□ 0.19
ITGB4-206ENST00000579662 TOM1L1O75674 476 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms