RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 ABI1Q8IZP0 508 aa13.26□□□□□ -0.29
LITAF-219ENST00000576334 FAM184AQ8NB25 1140 aa13.26□□□□□ -0.29
LITAF-219ENST00000576334 POLD4Q9HCU8 107 aa13.26□□□□□ -0.29
LITAF-219ENST00000576334 SH2B1Q9NRF2 756 aaPredicted RBP13.26□□□□□ -0.29
LITAF-219ENST00000576334 FAM105AQ9NUU6 356 aa13.26□□□□□ -0.29
LITAF-219ENST00000576334 DACT1Q9NYF0 836 aa13.26□□□□□ -0.29
LITAF-219ENST00000576334 CLEC1BQ9P126 229 aa13.26□□□□□ -0.29
LITAF-219ENST00000576334 BARX2Q9UMQ3 279 aaPredicted RBP13.26□□□□□ -0.29
LITAF-219ENST00000576334 INPP5FQ9Y2H2 1132 aa13.26□□□□□ -0.29
LITAF-219ENST00000576334 HIDE1A8MVS5 230 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 USO1O60763 962 aaKnown RBP13.25□□□□□ -0.29
LITAF-219ENST00000576334 LYPLA2O95372 231 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 LAG3P18627 525 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 CAPSQ13938 189 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 ECM1Q16610 540 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 CDR2LQ86X02 465 aaPredicted RBP13.25□□□□□ -0.29
LITAF-219ENST00000576334 NOSTRINQ8IVI9 506 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 ZNF710Q8N1W2 664 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 LRRC43Q8N309 656 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 C4orf32Q8N8J7 132 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 BCL7CQ8WUZ0 217 aaPredicted RBP13.25□□□□□ -0.29
LITAF-219ENST00000576334 CPB2Q96IY4 423 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 JPH2Q9BR39 696 aaPredicted RBP13.25□□□□□ -0.29
LITAF-219ENST00000576334 GBP3Q9H0R5 595 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 FOXP1Q9H334 677 aaPredicted RBP13.25□□□□□ -0.29
LITAF-219ENST00000576334 TLR9Q9NR96 1032 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 CHST12Q9NRB3 414 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 AAASQ9NRG9 546 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 AGPAT5Q9NUQ2 364 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 DNAJB4Q9UDY4 337 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 PCDHB6Q9Y5E3 794 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 PCDHB2Q9Y5E7 798 aa13.25□□□□□ -0.29
LITAF-219ENST00000576334 FSCN2O14926 492 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 B4GALT5O43286 388 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 HOXA2O43364 376 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 MBTPS2O43462 519 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 ZC3H11AO75152 810 aaKnown RBP eCLIP13.24□□□□□ -0.29
LITAF-219ENST00000576334 OFD1O75665 1012 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 EOMESO95936 686 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 OR52Z1P0C646 297 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 GLRA2P23416 452 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 ARL2P36404 184 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 NDUFV1P49821 464 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 BCAR1P56945 870 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 HMGN5P82970 282 aaKnown RBP13.24□□□□□ -0.29
LITAF-219ENST00000576334 CDC42EP1Q00587 391 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 AGMOQ6ZNB7 445 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 SRGAP1Q7Z6B7 1085 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 ZNF280BQ86YH2 543 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 SLC39A11Q8N1S5 342 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 AUTS2Q8WXX7 1259 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 MRPS27Q92552 414 aaKnown RBP13.24□□□□□ -0.29
LITAF-219ENST00000576334 TMX3Q96JJ7 454 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 ZNF558Q96NG5 402 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 EIF2AQ9BY44 585 aaKnown RBP13.24□□□□□ -0.29
LITAF-219ENST00000576334 INO80BQ9C086 356 aaPredicted RBP13.24□□□□□ -0.29
LITAF-219ENST00000576334 RNF39Q9H2S5 420 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 NRDE2Q9H7Z3 1164 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 TLE6Q9H808 572 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 ANKEF1Q9NU02 776 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 TBC1D13Q9NVG8 400 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 RNF216Q9NWF9 866 aaPredicted RBP13.24□□□□□ -0.29
LITAF-219ENST00000576334 USP20Q9Y2K6 914 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 HES2Q9Y543 173 aa13.24□□□□□ -0.29
LITAF-219ENST00000576334 FAM86C2PA6NEL3 165 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 TTLL13PA6NNM8 815 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 PP2D1A8MPX8 630 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 TSPAN1O60635 241 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 SSTR3P32745 418 aaPredicted RBP13.23□□□□□ -0.29
LITAF-219ENST00000576334 PTENP60484 403 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 PLCB3Q01970 1234 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 MBTD1Q05BQ5 628 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 GNL2Q13823 731 aaKnown RBP13.23□□□□□ -0.29
LITAF-219ENST00000576334 RABEP1Q15276 862 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 IL17AQ16552 155 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 AMHR2Q16671 573 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 LLGL2Q6P1M3 1020 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 GJD3Q8N144 294 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 EFHBQ8N7U6 833 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 SMG8Q8ND04 991 aaKnown RBP13.23□□□□□ -0.29
LITAF-219ENST00000576334 TCP11Q8WWU5 503 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 BSNDQ8WZ55 320 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 MSLNLQ96KJ4 702 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 TCF25Q9BQ70 676 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 TRAIPQ9BWF2 469 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 APOL5Q9BWW9 433 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 POLR3FQ9H1D9 316 aaPredicted RBP13.23□□□□□ -0.29
LITAF-219ENST00000576334 SPG21Q9NZD8 308 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 CDH22Q9UJ99 828 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 PPME1Q9Y570 386 aa13.23□□□□□ -0.29
LITAF-219ENST00000576334 INO80B-WBP1J3KQ70 363 aa13.22□□□□□ -0.29
LITAF-219ENST00000576334 ASAP2O43150 1006 aa13.22□□□□□ -0.29
LITAF-219ENST00000576334 ZNF623O75123 536 aa13.22□□□□□ -0.29
LITAF-219ENST00000576334 DGAT1O75907 488 aa13.22□□□□□ -0.29
LITAF-219ENST00000576334 DDHD2O94830 711 aa13.22□□□□□ -0.29
LITAF-219ENST00000576334 POMCP01189 267 aa13.22□□□□□ -0.29
LITAF-219ENST00000576334 U2AF2P26368 475 aaKnown RBP eCLIP13.22□□□□□ -0.29
LITAF-219ENST00000576334 CDC25AP30304 524 aa13.22□□□□□ -0.29
LITAF-219ENST00000576334 UBE3AQ05086 875 aa13.22□□□□□ -0.29
LITAF-219ENST00000576334 ZP2Q05996 745 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms