RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 GAS2O43903 313 aaKnown RBP15.14■□□□□ 0.01
ERCC4-207ENST00000575156 TPM3P06753 285 aa15.14■□□□□ 0.01
ERCC4-207ENST00000575156 RARBP10826 455 aa15.14■□□□□ 0.01
ERCC4-207ENST00000575156 PSEN2P49810 448 aa15.14■□□□□ 0.01
ERCC4-207ENST00000575156 PURAQ00577 322 aaKnown RBP15.14■□□□□ 0.01
ERCC4-207ENST00000575156 UBXN1Q04323 297 aa15.14■□□□□ 0.01
ERCC4-207ENST00000575156 GOLGA8FQ08AF8 430 aa15.14■□□□□ 0.01
ERCC4-207ENST00000575156 GOLGA8DPQ0D2H9 430 aa15.14■□□□□ 0.01
ERCC4-207ENST00000575156 PPP2R5AQ15172 486 aa15.14■□□□□ 0.01
ERCC4-207ENST00000575156 MAP3K21Q5TCX8 1036 aa15.14■□□□□ 0.01
ERCC4-207ENST00000575156 RNF149Q8NC42 400 aa15.14■□□□□ 0.01
ERCC4-207ENST00000575156 LMBR1Q8WVP7 490 aa15.14■□□□□ 0.01
ERCC4-207ENST00000575156 TCP11Q8WWU5 503 aa15.14■□□□□ 0.01
ERCC4-207ENST00000575156 NLRP4Q96MN2 994 aa15.14■□□□□ 0.01
ERCC4-207ENST00000575156 TTLL13PA6NNM8 815 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 HAS3O00219 553 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 VTNP04004 478 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 MYCNP04198 464 aaPredicted RBP15.13■□□□□ 0.01
ERCC4-207ENST00000575156 RPL13P26373 211 aaKnown RBP15.13■□□□□ 0.01
ERCC4-207ENST00000575156 NFIL3Q16649 462 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 BRDTQ58F21 947 aaPredicted RBP15.13■□□□□ 0.01
ERCC4-207ENST00000575156 TRIM59Q8IWR1 403 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 EXOC8Q8IYI6 725 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 CCDC155Q8N6L0 562 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 HVCN1Q96D96 273 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 TRIM44Q96DX7 344 aaPredicted RBP15.13■□□□□ 0.01
ERCC4-207ENST00000575156 JPH2Q9BR39 696 aaPredicted RBP15.13■□□□□ 0.01
ERCC4-207ENST00000575156 UPF3AQ9H1J1 476 aaKnown RBP15.13■□□□□ 0.01
ERCC4-207ENST00000575156 XPNPEP3Q9NQH7 507 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 COL1A2P08123 1366 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 ADAMTS4O75173 837 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 MARSP56192 900 aaKnown RBP15.13■□□□□ 0.01
ERCC4-207ENST00000575156 ZNF200P98182 395 aaPredicted RBP15.13■□□□□ 0.01
ERCC4-207ENST00000575156 MXD4Q14582 209 aaPredicted RBP15.13■□□□□ 0.01
ERCC4-207ENST00000575156 MAN2A1Q16706 1144 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 VWA3BQ502W6 1294 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 CXCL17Q6UXB2 119 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 RDH13Q8NBN7 331 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 RETREG2Q8NC44 543 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 BORCS6Q96GS4 357 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 TRIM17Q9Y577 477 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 PTCH2Q9Y6C5 1203 aa15.13■□□□□ 0.01
ERCC4-207ENST00000575156 EVPLQ92817 2033 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 K7ERI5 159 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 MAGEB2O15479 319 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 GNA14O95837 355 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 GNRH1P01148 92 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 INHAP05111 366 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 KLK7P49862 253 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 MAP2K1Q02750 393 aaPredicted RBP15.12■□□□□ 0.01
ERCC4-207ENST00000575156 SPECC1LQ69YQ0 1117 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 ARMCX5Q6P1M9 558 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 GOLGA5Q8TBA6 731 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 PXYLP1Q8TE99 480 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 KCNF1Q9H3M0 494 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 NDST4Q9H3R1 872 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 AKT3Q9Y243 479 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 GOLGA8IPA6NC78 632 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 GOLGA8JA6NMD2 632 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 HNRNPDLO14979 420 aaKnown RBP15.12■□□□□ 0.01
ERCC4-207ENST00000575156 CSDE1O75534 798 aaKnown RBP15.12■□□□□ 0.01
ERCC4-207ENST00000575156 DNM2P50570 870 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 LRMPQ12912 555 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 TBX2Q13207 712 aaPredicted RBP15.12■□□□□ 0.01
ERCC4-207ENST00000575156 CDCA2Q69YH5 1023 aaPredicted RBP15.12■□□□□ 0.01
ERCC4-207ENST00000575156 NFRKBQ6P4R8 1299 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 RUFY4Q6ZNE9 571 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 SLC9A9Q8IVB4 645 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 FAM186BQ8IYM0 893 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 KIAA0319LQ8IZA0 1049 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 BICD1Q96G01 975 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 TARS2Q9BW92 718 aaKnown RBP15.12■□□□□ 0.01
ERCC4-207ENST00000575156 MINDY3Q9H8M7 445 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 HSPBP1Q9NZL4 362 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 ARMCX3Q9UH62 379 aaPredicted RBP15.12■□□□□ 0.01
ERCC4-207ENST00000575156 EXOC7Q9UPT5 735 aa15.12■□□□□ 0.01
ERCC4-207ENST00000575156 GOLGA6L6A8MZA4 724 aa15.11■□□□□ 0.01
ERCC4-207ENST00000575156 SLC16A3O15427 465 aaKnown RBP15.11■□□□□ 0.01
ERCC4-207ENST00000575156 EXOC3O60645 756 aa15.11■□□□□ 0.01
ERCC4-207ENST00000575156 EPB41P11171 864 aaKnown RBP15.11■□□□□ 0.01
ERCC4-207ENST00000575156 C1QTNF8P60827 252 aa15.11■□□□□ 0.01
ERCC4-207ENST00000575156 FRMD5Q7Z6J6 570 aa15.11■□□□□ 0.01
ERCC4-207ENST00000575156 CACTINQ8WUQ7 758 aaKnown RBP15.11■□□□□ 0.01
ERCC4-207ENST00000575156 SAAL1Q96ER3 474 aa15.11■□□□□ 0.01
ERCC4-207ENST00000575156 ZBTB45Q96K62 511 aaPredicted RBP15.11■□□□□ 0.01
ERCC4-207ENST00000575156 BEGAINQ9BUH8 593 aa15.11■□□□□ 0.01
ERCC4-207ENST00000575156 HAPLN2Q9GZV7 340 aa15.11■□□□□ 0.01
ERCC4-207ENST00000575156 CCDC113Q9H0I3 377 aa15.11■□□□□ 0.01
ERCC4-207ENST00000575156 HDAC6Q9UBN7 1215 aa15.11■□□□□ 0.01
ERCC4-207ENST00000575156 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.11■□□□□ 0.01
ERCC4-207ENST00000575156 NRCAMQ92823 1304 aa15.11■□□□□ 0.01
ERCC4-207ENST00000575156 H0YCG3 227 aa15.1■□□□□ 0.01
ERCC4-207ENST00000575156 IQCF3P0C7M6 154 aa15.1■□□□□ 0.01
ERCC4-207ENST00000575156 PSMC2P35998 433 aaKnown RBP15.1■□□□□ 0.01
ERCC4-207ENST00000575156 ADAM17P78536 824 aa15.1■□□□□ 0.01
ERCC4-207ENST00000575156 STRN3Q13033 797 aa15.1■□□□□ 0.01
ERCC4-207ENST00000575156 C12orf56Q8IXR9 622 aa15.1■□□□□ 0.01
ERCC4-207ENST00000575156 SH3TC2Q8TF17 1288 aa15.1■□□□□ 0.01
ERCC4-207ENST00000575156 KCNN1Q92952 543 aa15.1■□□□□ 0.01
ERCC4-207ENST00000575156 FAM49AQ9H0Q0 323 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms