RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 NCK2O43639 380 aa21.92■■□□□ 1.1
SCARF1-208ENST00000574545 FGF18O76093 207 aa21.92■■□□□ 1.1
SCARF1-208ENST00000574545 LAG3P18627 525 aa21.92■■□□□ 1.1
SCARF1-208ENST00000574545 PLCB3Q01970 1234 aa21.92■■□□□ 1.1
SCARF1-208ENST00000574545 GNL2Q13823 731 aaKnown RBP21.92■■□□□ 1.1
SCARF1-208ENST00000574545 UBXN11Q5T124 520 aa21.92■■□□□ 1.1
SCARF1-208ENST00000574545 SPOUT1Q5T280 376 aaKnown RBP21.92■■□□□ 1.1
SCARF1-208ENST00000574545 TWF2Q6IBS0 349 aaKnown RBP21.92■■□□□ 1.1
SCARF1-208ENST00000574545 LRRC43Q8N309 656 aa21.92■■□□□ 1.1
SCARF1-208ENST00000574545 RNF169Q8NCN4 708 aa21.92■■□□□ 1.1
SCARF1-208ENST00000574545 HELQQ8TDG4 1101 aa21.92■■□□□ 1.1
SCARF1-208ENST00000574545 DBR1Q9UK59 544 aaKnown RBP21.92■■□□□ 1.1
SCARF1-208ENST00000574545 MEIS3P2A8K0S8 358 aa21.91■■□□□ 1.1
SCARF1-208ENST00000574545 SKIP12755 728 aa21.91■■□□□ 1.1
SCARF1-208ENST00000574545 GLRA2P23416 452 aa21.91■■□□□ 1.1
SCARF1-208ENST00000574545 GJB2P29033 226 aa21.91■■□□□ 1.1
SCARF1-208ENST00000574545 GTF2F1P35269 517 aaKnown RBP eCLIP21.91■■□□□ 1.13e-7■■■■■ 35.7
SCARF1-208ENST00000574545 CAPSQ13938 189 aa21.91■■□□□ 1.1
SCARF1-208ENST00000574545 ECM1Q16610 540 aa21.91■■□□□ 1.1
SCARF1-208ENST00000574545 CSPP1Q1MSJ5 1256 aa21.91■■□□□ 1.1
SCARF1-208ENST00000574545 KCNT2Q6UVM3 1135 aa21.91■■□□□ 1.1
SCARF1-208ENST00000574545 MRPL10Q7Z7H8 261 aaKnown RBP21.91■■□□□ 1.1
SCARF1-208ENST00000574545 ADGRD2Q7Z7M1 963 aa21.91■■□□□ 1.1
SCARF1-208ENST00000574545 ABI1Q8IZP0 508 aa21.91■■□□□ 1.1
SCARF1-208ENST00000574545 LPPQ93052 612 aa21.91■■□□□ 1.1
SCARF1-208ENST00000574545 NACC1Q96RE7 527 aa21.91■■□□□ 1.1
SCARF1-208ENST00000574545 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.91■■□□□ 1.1
SCARF1-208ENST00000574545 KIF3AQ9Y496 699 aa21.91■■□□□ 1.1
SCARF1-208ENST00000574545 H3BQ06 376 aaPredicted RBP21.9■■□□□ 1.1
SCARF1-208ENST00000574545 MUTP22033 750 aa21.9■■□□□ 1.1
SCARF1-208ENST00000574545 RAB27AP51159 221 aa21.9■■□□□ 1.1
SCARF1-208ENST00000574545 ERVFC1P60507 584 aa21.9■■□□□ 1.1
SCARF1-208ENST00000574545 DLX2Q07687 328 aaPredicted RBP21.9■■□□□ 1.1
SCARF1-208ENST00000574545 PTGDRQ13258 359 aa21.9■■□□□ 1.1
SCARF1-208ENST00000574545 ADAM15Q13444 863 aa21.9■■□□□ 1.1
SCARF1-208ENST00000574545 PDIA5Q14554 519 aa21.9■■□□□ 1.1
SCARF1-208ENST00000574545 PCBP1Q15365 356 aaKnown RBP eCLIP21.9■■□□□ 1.1
SCARF1-208ENST00000574545 AMHR2Q16671 573 aa21.9■■□□□ 1.1
SCARF1-208ENST00000574545 IGSF22Q8N9C0 903 aa21.9■■□□□ 1.1
SCARF1-208ENST00000574545 NFKBIZQ9BYH8 718 aa21.9■■□□□ 1.1
SCARF1-208ENST00000574545 CLDND1Q9NY35 253 aa21.9■■□□□ 1.1
SCARF1-208ENST00000574545 LZTS1Q9Y250 596 aa21.9■■□□□ 1.1
SCARF1-208ENST00000574545 FSCN2O14926 492 aa21.89■■□□□ 1.09
SCARF1-208ENST00000574545 OFD1O75665 1012 aa21.89■■□□□ 1.09
SCARF1-208ENST00000574545 IL17AQ16552 155 aa21.89■■□□□ 1.09
SCARF1-208ENST00000574545 POTEGQ6S5H5 508 aa21.89■■□□□ 1.09
SCARF1-208ENST00000574545 AGMOQ6ZNB7 445 aa21.89■■□□□ 1.09
SCARF1-208ENST00000574545 THNSL1Q8IYQ7 743 aa21.89■■□□□ 1.09
SCARF1-208ENST00000574545 ERMNQ8TAM6 284 aa21.89■■□□□ 1.09
SCARF1-208ENST00000574545 RSPH1Q8WYR4 309 aa21.89■■□□□ 1.09
SCARF1-208ENST00000574545 MRPS27Q92552 414 aaKnown RBP21.89■■□□□ 1.09
SCARF1-208ENST00000574545 PCDHB2Q9Y5E7 798 aa21.89■■□□□ 1.09
SCARF1-208ENST00000574545 PCDHGC5Q9Y5F6 944 aa21.89■■□□□ 1.09
SCARF1-208ENST00000574545 GRXCR2A6NFK2 248 aa21.88■■□□□ 1.09
SCARF1-208ENST00000574545 TSPAN1O60635 241 aa21.88■■□□□ 1.09
SCARF1-208ENST00000574545 USO1O60763 962 aaKnown RBP21.88■■□□□ 1.09
SCARF1-208ENST00000574545 CSPG5O95196 566 aa21.88■■□□□ 1.09
SCARF1-208ENST00000574545 PBX3P40426 434 aa21.88■■□□□ 1.09
SCARF1-208ENST00000574545 MBTD1Q05BQ5 628 aa21.88■■□□□ 1.09
SCARF1-208ENST00000574545 TFDP1Q14186 410 aa21.88■■□□□ 1.09
SCARF1-208ENST00000574545 SLC39A11Q8N1S5 342 aa21.88■■□□□ 1.09
SCARF1-208ENST00000574545 ZNF558Q96NG5 402 aa21.88■■□□□ 1.09
SCARF1-208ENST00000574545 MRPL9Q9BYD2 267 aaKnown RBP21.88■■□□□ 1.09
SCARF1-208ENST00000574545 GPRC5CQ9NQ84 441 aa21.88■■□□□ 1.09
SCARF1-208ENST00000574545 TLR9Q9NR96 1032 aa21.88■■□□□ 1.09
SCARF1-208ENST00000574545 LAD1O00515 517 aa21.87■■□□□ 1.09
SCARF1-208ENST00000574545 LINC01565O15544 149 aa21.87■■□□□ 1.09
SCARF1-208ENST00000574545 IL9P15248 144 aa21.87■■□□□ 1.09
SCARF1-208ENST00000574545 LONRF3Q496Y0 759 aa21.87■■□□□ 1.09
SCARF1-208ENST00000574545 PTCRAQ6ISU1 281 aaPredicted RBP21.87■■□□□ 1.09
SCARF1-208ENST00000574545 SMG8Q8ND04 991 aaKnown RBP21.87■■□□□ 1.09
SCARF1-208ENST00000574545 CCDC43Q96MW1 224 aaKnown RBP21.87■■□□□ 1.09
SCARF1-208ENST00000574545 BACH2Q9BYV9 841 aa21.87■■□□□ 1.09
SCARF1-208ENST00000574545 POLR3FQ9H1D9 316 aaPredicted RBP21.87■■□□□ 1.09
SCARF1-208ENST00000574545 IGFLR1Q9H665 355 aa21.87■■□□□ 1.09
SCARF1-208ENST00000574545 LRWD1Q9UFC0 647 aa21.87■■□□□ 1.09
SCARF1-208ENST00000574545 TBX10O75333 385 aa21.86■■□□□ 1.09
SCARF1-208ENST00000574545 CYP11B2P19099 503 aa21.86■■□□□ 1.09
SCARF1-208ENST00000574545 AXLP30530 894 aa21.86■■□□□ 1.09
SCARF1-208ENST00000574545 PRPHP41219 470 aa21.86■■□□□ 1.09
SCARF1-208ENST00000574545 PUS10Q3MIT2 529 aaKnown RBP21.86■■□□□ 1.09
SCARF1-208ENST00000574545 RILPL1Q5EBL4 403 aa21.86■■□□□ 1.09
SCARF1-208ENST00000574545 HAUS3Q68CZ6 603 aa21.86■■□□□ 1.09
SCARF1-208ENST00000574545 FAM178BQ8IXR5 827 aa21.86■■□□□ 1.09
SCARF1-208ENST00000574545 EFHBQ8N7U6 833 aa21.86■■□□□ 1.09
SCARF1-208ENST00000574545 MCPH1Q8NEM0 835 aa21.86■■□□□ 1.09
SCARF1-208ENST00000574545 PGBD4Q96DM1 585 aa21.86■■□□□ 1.09
SCARF1-208ENST00000574545 TBC1D13Q9NVG8 400 aa21.86■■□□□ 1.09
SCARF1-208ENST00000574545 SPG21Q9NZD8 308 aa21.86■■□□□ 1.09
SCARF1-208ENST00000574545 INO80B-WBP1J3KQ70 363 aa21.85■■□□□ 1.09
SCARF1-208ENST00000574545 NCLP19338 710 aaKnown RBP21.85■■□□□ 1.09
SCARF1-208ENST00000574545 PPM1AP35813 382 aa21.85■■□□□ 1.09
SCARF1-208ENST00000574545 CCT6AP40227 531 aaKnown RBP21.85■■□□□ 1.09
SCARF1-208ENST00000574545 AFF1P51825 1210 aaKnown RBP21.85■■□□□ 1.09
SCARF1-208ENST00000574545 BCAR1P56945 870 aa21.85■■□□□ 1.09
SCARF1-208ENST00000574545 CUL4AQ13619 759 aa21.85■■□□□ 1.09
SCARF1-208ENST00000574545 NOMO2Q5JPE7 1267 aa21.85■■□□□ 1.09
SCARF1-208ENST00000574545 MCTP1Q6DN14 999 aa21.85■■□□□ 1.09
SCARF1-208ENST00000574545 PDE12Q6L8Q7 609 aaKnown RBP21.85■■□□□ 1.09
SCARF1-208ENST00000574545 PADI6Q6TGC4 694 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms