RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 SMAP1Q8IYB5 467 aaPredicted RBP15.3■□□□□ 0.04
RPAIN-209ENST00000571558 CRIPAKQ8N1N5 446 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 SNX29Q8TEQ0 813 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 DISC1Q9NRI5 854 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 USP15Q9Y4E8 981 aaPredicted RBP15.3■□□□□ 0.04
RPAIN-209ENST00000571558 STK24Q9Y6E0 443 aa15.3■□□□□ 0.04
RPAIN-209ENST00000571558 WDR64B1ANS9 1081 aa15.29■□□□□ 0.04
RPAIN-209ENST00000571558 POLR2DO15514 142 aaKnown RBP15.29■□□□□ 0.04
RPAIN-209ENST00000571558 SLITRK3O94933 977 aa15.29■□□□□ 0.04
RPAIN-209ENST00000571558 ZNF202O95125 648 aa15.29■□□□□ 0.04
RPAIN-209ENST00000571558 ITGB1P05556 798 aa15.29■□□□□ 0.04
RPAIN-209ENST00000571558 STAG3L1P0CL83 205 aa15.29■□□□□ 0.04
RPAIN-209ENST00000571558 TXLNAP40222 546 aa15.29■□□□□ 0.04
RPAIN-209ENST00000571558 UBE3AQ05086 875 aa15.29■□□□□ 0.04
RPAIN-209ENST00000571558 MGAT3Q09327 533 aa15.29■□□□□ 0.04
RPAIN-209ENST00000571558 FBXO47Q5MNV8 452 aa15.29■□□□□ 0.04
RPAIN-209ENST00000571558 HAUS3Q68CZ6 603 aa15.29■□□□□ 0.04
RPAIN-209ENST00000571558 NPAS4Q8IUM7 802 aa15.29■□□□□ 0.04
RPAIN-209ENST00000571558 PDILTQ8N807 584 aa15.29■□□□□ 0.04
RPAIN-209ENST00000571558 ERMNQ8TAM6 284 aa15.29■□□□□ 0.04
RPAIN-209ENST00000571558 ASIC4Q96FT7 647 aa15.29■□□□□ 0.04
RPAIN-209ENST00000571558 CDCA3Q99618 268 aaPredicted RBP15.29■□□□□ 0.04
RPAIN-209ENST00000571558 PANK2Q9BZ23 570 aa15.29■□□□□ 0.04
RPAIN-209ENST00000571558 RGL1Q9NZL6 768 aa15.29■□□□□ 0.04
RPAIN-209ENST00000571558 TTC3P53804 2025 aa15.28■□□□□ 0.04
RPAIN-209ENST00000571558 IGKV6D-21A0A0A0MT36 114 aa15.28■□□□□ 0.04
RPAIN-209ENST00000571558 GSTTP1A0A1W2PQM5 241 aa15.28■□□□□ 0.04
RPAIN-209ENST00000571558 MBLAC1A4D2B0 266 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-209ENST00000571558 ACTN4O43707 911 aaKnown RBP15.28■□□□□ 0.04
RPAIN-209ENST00000571558 PLCG1P19174 1290 aa15.28■□□□□ 0.04
RPAIN-209ENST00000571558 CCT6AP40227 531 aaKnown RBP15.28■□□□□ 0.04
RPAIN-209ENST00000571558 NRIP1P48552 1158 aa15.28■□□□□ 0.04
RPAIN-209ENST00000571558 LONRF3Q496Y0 759 aa15.28■□□□□ 0.04
RPAIN-209ENST00000571558 PDE12Q6L8Q7 609 aaKnown RBP15.28■□□□□ 0.04
RPAIN-209ENST00000571558 PDXDC2PQ6P474 469 aa15.28■□□□□ 0.04
RPAIN-209ENST00000571558 KCNK18Q7Z418 384 aa15.28■□□□□ 0.04
RPAIN-209ENST00000571558 KLHL23Q8NBE8 558 aa15.28■□□□□ 0.04
RPAIN-209ENST00000571558 POF1BQ8WVV4 589 aa15.28■□□□□ 0.04
RPAIN-209ENST00000571558 ATOH1Q92858 354 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-209ENST00000571558 DYDC2Q96IM9 177 aa15.28■□□□□ 0.04
RPAIN-209ENST00000571558 TIGD1Q96MW7 591 aa15.28■□□□□ 0.04
RPAIN-209ENST00000571558 TUFT1Q9NNX1 390 aa15.28■□□□□ 0.04
RPAIN-209ENST00000571558 WRAP73Q9P2S5 460 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-209ENST00000571558 PCDHA10Q9Y5I2 948 aa15.28■□□□□ 0.04
RPAIN-209ENST00000571558 MRPL42Q9Y6G3 142 aaKnown RBP15.28■□□□□ 0.04
RPAIN-209ENST00000571558 DOCK5Q9H7D0 1870 aa15.28■□□□□ 0.04
RPAIN-209ENST00000571558 SPTBN4Q9H254 2564 aa15.28■□□□□ 0.04
RPAIN-209ENST00000571558 KDM3AQ9Y4C1 1321 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 MUTP22033 750 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 DNAJB1P25685 340 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 CYP4A11Q02928 519 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 UGCGQ16739 394 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 PTPN21Q16825 1174 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 IER5Q5VY09 327 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 POTEGQ6S5H5 508 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 ADGRD2Q7Z7M1 963 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 TRIM50Q86XT4 487 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 KCTD17Q8N5Z5 321 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 SUSD6Q92537 303 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 CALML4Q96GE6 196 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 PYM1Q9BRP8 204 aaKnown RBP15.27■□□□□ 0.04
RPAIN-209ENST00000571558 TLE6Q9H808 572 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 BLOC1S4Q9NUP1 217 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 DDX19AQ9NUU7 478 aaKnown RBP15.27■□□□□ 0.04
RPAIN-209ENST00000571558 ERAP1Q9NZ08 941 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 CCDC39Q9UFE4 941 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 USP25Q9UHP3 1055 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 TCEAL9Q9UHQ7 104 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 TUBE1Q9UJT0 475 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 ATG2AQ2TAZ0 1938 aa15.27■□□□□ 0.04
RPAIN-209ENST00000571558 RBAK-RBAKDNI3L0D1 243 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 LYPLA2O95372 231 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 GLP2RO95838 553 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 P4HBP07237 508 aaKnown RBP15.26■□□□□ 0.03
RPAIN-209ENST00000571558 SLFN14P0C7P3 912 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 SRGAP2BP0DMP2 458 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 SP4Q02446 784 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 PPFIA1Q13136 1202 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 CTTNQ14247 550 aaKnown RBP15.26■□□□□ 0.03
RPAIN-209ENST00000571558 UTP14CQ5TAP6 766 aaKnown RBP15.26■□□□□ 0.03
RPAIN-209ENST00000571558 RRAGBQ5VZM2 374 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 KRBA2Q6ZNG9 492 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 CCDC60Q8IWA6 550 aaPredicted RBP15.26■□□□□ 0.03
RPAIN-209ENST00000571558 IQUBQ8NA54 791 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 ATP8B4Q8TF62 1192 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 SEPT1Q8WYJ6 367 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 DHX58Q96C10 678 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 PCYT2Q99447 389 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 PLIN2Q99541 437 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 LXNQ9BS40 222 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 NT5C3AQ9H0P0 336 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 CLSTN2Q9H4D0 955 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 AAASQ9NRG9 546 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 TMEM63CQ9P1W3 806 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 SERTAD1Q9UHV2 236 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 BARX2Q9UMQ3 279 aaPredicted RBP15.26■□□□□ 0.03
RPAIN-209ENST00000571558 KIAA1024Q9UPX6 916 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 SAMM50Q9Y512 469 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 IGSF9BQ9UPX0 1349 aa15.26■□□□□ 0.03
RPAIN-209ENST00000571558 KINO60870 393 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms