RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 ZBTB39O15060 712 aa19.05■□□□□ 0.64
MAP1LC3B-208ENST00000570189 IBSPP21815 317 aaPredicted RBP19.05■□□□□ 0.64
MAP1LC3B-208ENST00000570189 GTF2F1P35269 517 aaKnown RBP eCLIP19.05■□□□□ 0.64
MAP1LC3B-208ENST00000570189 TXKP42681 527 aa19.05■□□□□ 0.64
MAP1LC3B-208ENST00000570189 COASYQ13057 564 aa19.05■□□□□ 0.64
MAP1LC3B-208ENST00000570189 SMAD4Q13485 552 aaKnown RBP19.05■□□□□ 0.64
MAP1LC3B-208ENST00000570189 TWF2Q6IBS0 349 aaKnown RBP19.05■□□□□ 0.64
MAP1LC3B-208ENST00000570189 TMEM184AQ6ZMB5 413 aa19.05■□□□□ 0.64
MAP1LC3B-208ENST00000570189 MRPL10Q7Z7H8 261 aaKnown RBP19.05■□□□□ 0.64
MAP1LC3B-208ENST00000570189 HELQQ8TDG4 1101 aa19.05■□□□□ 0.64
MAP1LC3B-208ENST00000570189 TMEM143Q96AN5 459 aa19.05■□□□□ 0.64
MAP1LC3B-208ENST00000570189 TMEM60Q9H2L4 133 aa19.05■□□□□ 0.64
MAP1LC3B-208ENST00000570189 MINDY3Q9H8M7 445 aa19.05■□□□□ 0.64
MAP1LC3B-208ENST00000570189 TUFT1Q9NNX1 390 aa19.05■□□□□ 0.64
MAP1LC3B-208ENST00000570189 NGRNQ9NPE2 291 aaKnown RBP19.05■□□□□ 0.64
MAP1LC3B-208ENST00000570189 CD320Q9NPF0 282 aa19.05■□□□□ 0.64
MAP1LC3B-208ENST00000570189 MBTPS2O43462 519 aa19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 MUTP22033 750 aa19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 AXLP30530 894 aa19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 HOXA11P31270 313 aaPredicted RBP19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 RARRES1P49788 294 aa19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 PTENP60484 403 aa19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 ERVFC1P60507 584 aa19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 ZP2Q05996 745 aa19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 KCNC3Q14003 757 aa19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 RABEP1Q15276 862 aa19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 ADHFE1Q8IWW8 467 aa19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 GJD3Q8N144 294 aa19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 SLC39A11Q8N1S5 342 aa19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 SMRP1Q8NCR6 262 aa19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 POLR3CQ9BUI4 534 aaPredicted RBP19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 SPG21Q9NZD8 308 aa19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 CLEC1BQ9P126 229 aa19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 PUF60Q9UHX1 559 aaKnown RBP19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 CD207Q9UJ71 328 aa19.04■□□□□ 0.64
MAP1LC3B-208ENST00000570189 CNTNAP2Q9UHC6 1331 aa19.03■□□□□ 0.64
MAP1LC3B-208ENST00000570189 PI4K2BG5E9Z4 385 aa19.03■□□□□ 0.64
MAP1LC3B-208ENST00000570189 LINC01565O15544 149 aa19.03■□□□□ 0.64
MAP1LC3B-208ENST00000570189 GLP2RO95838 553 aa19.03■□□□□ 0.64
MAP1LC3B-208ENST00000570189 SPATA31C1P0DKV0 1188 aa19.03■□□□□ 0.64
MAP1LC3B-208ENST00000570189 U2AF2P26368 475 aaKnown RBP eCLIP19.03■□□□□ 0.644e-11■■■■□ 26.1
MAP1LC3B-208ENST00000570189 ARL2P36404 184 aa19.03■□□□□ 0.64
MAP1LC3B-208ENST00000570189 NRIP1P48552 1158 aa19.03■□□□□ 0.64
MAP1LC3B-208ENST00000570189 KRT17Q04695 432 aa19.03■□□□□ 0.64
MAP1LC3B-208ENST00000570189 DUSP6Q16828 381 aa19.03■□□□□ 0.64
MAP1LC3B-208ENST00000570189 NOSTRINQ8IVI9 506 aa19.03■□□□□ 0.64
MAP1LC3B-208ENST00000570189 RNF149Q8NC42 400 aa19.03■□□□□ 0.64
MAP1LC3B-208ENST00000570189 PGBD4Q96DM1 585 aa19.03■□□□□ 0.64
MAP1LC3B-208ENST00000570189 CCDC51Q96ER9 411 aa19.03■□□□□ 0.64
MAP1LC3B-208ENST00000570189 DBR1Q9UK59 544 aaKnown RBP19.03■□□□□ 0.64
MAP1LC3B-208ENST00000570189 POTEMA6NI47 508 aa19.02■□□□□ 0.64
MAP1LC3B-208ENST00000570189 INPPL1O15357 1258 aa19.02■□□□□ 0.64
MAP1LC3B-208ENST00000570189 SRGAP2CP0DJJ0 459 aa19.02■□□□□ 0.64
MAP1LC3B-208ENST00000570189 MCM7P33993 719 aa19.02■□□□□ 0.64
MAP1LC3B-208ENST00000570189 FOSBP53539 338 aa19.02■□□□□ 0.64
MAP1LC3B-208ENST00000570189 TFDP1Q14186 410 aa19.02■□□□□ 0.64
MAP1LC3B-208ENST00000570189 GLB1LQ6UWU2 654 aa19.02■□□□□ 0.64
MAP1LC3B-208ENST00000570189 RNF169Q8NCN4 708 aa19.02■□□□□ 0.64
MAP1LC3B-208ENST00000570189 CNNM3Q8NE01 707 aa19.02■□□□□ 0.64
MAP1LC3B-208ENST00000570189 POP1Q99575 1024 aaKnown RBP19.02■□□□□ 0.64
MAP1LC3B-208ENST00000570189 IGFLR1Q9H665 355 aa19.02■□□□□ 0.64
MAP1LC3B-208ENST00000570189 TLE6Q9H808 572 aa19.02■□□□□ 0.64
MAP1LC3B-208ENST00000570189 PCDHB2Q9Y5E7 798 aa19.02■□□□□ 0.64
MAP1LC3B-208ENST00000570189 TDRD15B5MCY1 1934 aaKnown RBP19.02■□□□□ 0.63
MAP1LC3B-208ENST00000570189 OFD1O75665 1012 aa19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 OR52Z1P0C646 297 aa19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 RPA1P27694 616 aa19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 ALDH7A1P49419 539 aaKnown RBP19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 NDUFV1P49821 464 aa19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 BCAR1P56945 870 aa19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 GUCY1B3Q02153 619 aa19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 NOMO2Q5JPE7 1267 aa19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 UBXN11Q5T124 520 aa19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 EP400NLQ6ZTU2 488 aa19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 CATSPER3Q86XQ3 398 aa19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 FAM184AQ8NB25 1140 aa19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 TBC1D13Q9NVG8 400 aa19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 DAXXQ9UER7 740 aaPredicted RBP19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 STK39Q9UEW8 545 aa19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 PCDHGC5Q9Y5F6 944 aa19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 IRAK3Q9Y616 596 aa19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 ZMYM2Q9UBW7 1377 aa19.01■□□□□ 0.63
MAP1LC3B-208ENST00000570189 GPR37L1O60883 481 aa19■□□□□ 0.63
MAP1LC3B-208ENST00000570189 NCLP19338 710 aaKnown RBP19■□□□□ 0.63
MAP1LC3B-208ENST00000570189 FXR2P51116 673 aaKnown RBP eCLIP19■□□□□ 0.63
MAP1LC3B-208ENST00000570189 CAPSQ13938 189 aa19■□□□□ 0.63
MAP1LC3B-208ENST00000570189 TTC38Q5R3I4 469 aa19■□□□□ 0.63
MAP1LC3B-208ENST00000570189 AGMOQ6ZNB7 445 aa19■□□□□ 0.63
MAP1LC3B-208ENST00000570189 C4orf32Q8N8J7 132 aa19■□□□□ 0.63
MAP1LC3B-208ENST00000570189 MCPH1Q8NEM0 835 aa19■□□□□ 0.63
MAP1LC3B-208ENST00000570189 MICAL1Q8TDZ2 1067 aa19■□□□□ 0.63
MAP1LC3B-208ENST00000570189 KHSRPQ92945 711 aaKnown RBP eCLIP19■□□□□ 0.63
MAP1LC3B-208ENST00000570189 NACC1Q96RE7 527 aa19■□□□□ 0.63
MAP1LC3B-208ENST00000570189 TCF25Q9BQ70 676 aa19■□□□□ 0.63
MAP1LC3B-208ENST00000570189 EPHX3Q9H6B9 360 aa19■□□□□ 0.63
MAP1LC3B-208ENST00000570189 UBN1Q9NPG3 1134 aa19■□□□□ 0.63
MAP1LC3B-208ENST00000570189 KANSL3Q9P2N6 904 aa19■□□□□ 0.63
MAP1LC3B-208ENST00000570189 MEIS3P2A8K0S8 358 aa18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 ST18O60284 1047 aa18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 TSPAN1O60635 241 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms