RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 CNTNAP5Q8WYK1 1306 aa9.46□□□□□ -0.9
SNX29-208ENST00000569801 SPG11Q96JI7 2443 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 MICAL3Q7RTP6 2002 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 H3BRB1 525 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 NOP56O00567 594 aaKnown RBP9.45□□□□□ -0.9
SNX29-208ENST00000569801 NDUFV2P19404 249 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 CR2P20023 1033 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 HOXC8P31273 242 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 MAGEA9P43362 315 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 UBAP2LQ14157 1087 aaKnown RBP9.45□□□□□ -0.9
SNX29-208ENST00000569801 NEDD9Q14511 834 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 NONOQ15233 471 aaKnown RBP eCLIP9.45□□□□□ -0.9
SNX29-208ENST00000569801 UBE2SQ16763 222 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 TSGA10IPQ3SY00 556 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 RARS2Q5T160 578 aaKnown RBP9.45□□□□□ -0.9
SNX29-208ENST00000569801 ZNF618Q5T7W0 954 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 KIAA1841Q6NSI8 718 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 TYW1BQ6NUM6 668 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 APOA5Q6Q788 366 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 ZNF574Q6ZN55 896 aaPredicted RBP9.45□□□□□ -0.9
SNX29-208ENST00000569801 CYFIP1Q7L576 1253 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 DHX32Q7L7V1 743 aaKnown RBP9.45□□□□□ -0.9
SNX29-208ENST00000569801 SERINC5Q86VE9 423 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 TRIM50Q86XT4 487 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 RASGRP4Q8TDF6 673 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 GPR20Q99678 358 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 EDEM2Q9BV94 578 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 TUT1Q9H6E5 874 aaKnown RBP9.45□□□□□ -0.9
SNX29-208ENST00000569801 PSTPIP2Q9H939 334 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 BRPF3Q9ULD4 1205 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 COL6A6A6NMZ7 2263 aa9.45□□□□□ -0.9
SNX29-208ENST00000569801 SPAARA0A1B0GVQ0 90 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 C17orf102A2RUQ5 167 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 ATP9AO75110 1047 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 SMIM10L2AP0DMW4 78 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 SMIM10L2BP0DMW5 78 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 KCNA2P16389 499 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 ITGB5P18084 799 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 FUT2Q10981 343 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 RTN1Q16799 776 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 WWC2Q6AWC2 1192 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 KANK3Q6NY19 840 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 HEATR3Q7Z4Q2 680 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 NLRX1Q86UT6 975 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 SCUBE3Q8IX30 993 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 CASP10Q92851 521 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 GPRASP2Q96D09 838 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 SENP7Q9BQF6 1050 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 RBM28Q9NW13 759 aaKnown RBP9.44□□□□□ -0.9
SNX29-208ENST00000569801 KAT6AQ92794 2004 aa9.44□□□□□ -0.9
SNX29-208ENST00000569801 SPDYE3A6NKU9 549 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 H0Y626 953 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 ZBTB43O43298 467 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 TRIM16O95361 564 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 THPOP40225 353 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 ERVFC1P60507 584 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 SIM1P81133 766 aaPredicted RBP9.43□□□□□ -0.9
SNX29-208ENST00000569801 SP4Q02446 784 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 PTPN14Q15678 1187 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 PLEKHG4Q58EX7 1191 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 UTP14CQ5TAP6 766 aaKnown RBP9.43□□□□□ -0.9
SNX29-208ENST00000569801 TCEAL6Q6IPX3 200 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 SYNE3Q6ZMZ3 975 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 C12orf76Q8N812 135 aaPredicted RBP9.43□□□□□ -0.9
SNX29-208ENST00000569801 KCNB2Q92953 911 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 ATP6V0A1Q93050 837 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 TCEAL3Q969E4 200 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 USP26Q9BXU7 913 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 OSBPL6Q9BZF3 934 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 SEMA4CQ9C0C4 833 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 RNPEPQ9H4A4 650 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 FAM217BQ9NTX9 383 aaPredicted RBP9.43□□□□□ -0.9
SNX29-208ENST00000569801 DNMT3LQ9UJW3 386 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 PCDHA6Q9UN73 950 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 PCDHA8Q9Y5H6 950 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 UBIAD1Q9Y5Z9 338 aa9.43□□□□□ -0.9
SNX29-208ENST00000569801 MRPL42Q9Y6G3 142 aaKnown RBP9.43□□□□□ -0.9
SNX29-208ENST00000569801 USP9YO00507 2555 aaPredicted RBP9.43□□□□□ -0.9
SNX29-208ENST00000569801 NLRC5Q86WI3 1866 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 ITPR2Q14571 2701 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 KLF18A0A0U1RQI7 1052 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 GSTTP1A0A1W2PQM5 241 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 GOLGA8AA7E2F4 631 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 GOLGA8BA8MQT2 603 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 RSPH10B2B2RC85 870 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 RSPH10BP0C881 870 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 CPA1P15085 419 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 CDC27P30260 824 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 RDXP35241 583 aaKnown RBP9.42□□□□□ -0.9
SNX29-208ENST00000569801 TCF7P36402 384 aaPredicted RBP9.42□□□□□ -0.9
SNX29-208ENST00000569801 ADCY1Q08828 1119 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 MTAPQ13126 283 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 MTMR1Q13613 665 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 KRT32Q14532 448 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 TAF1BQ53T94 588 aaPredicted RBP9.42□□□□□ -0.9
SNX29-208ENST00000569801 PLA2G2CQ5R387 149 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 PPP1R18Q6NYC8 613 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 CEP68Q76N32 757 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 PRICKLE2Q7Z3G6 844 aa9.42□□□□□ -0.9
SNX29-208ENST00000569801 GIMAP8Q8ND71 665 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms