RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 PRDM6Q9NQX0 595 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 INTS13Q9NVM9 706 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 FAM184BQ9ULE4 1060 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 STXBP5LQ9Y2K9 1186 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 ZKSCAN5Q9Y2L8 839 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 Q9Y3F1 56 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 SIP14410 1827 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 EVPLQ92817 2033 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 ZMYM2Q9UBW7 1377 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.37□□□□□ -1.07
CDH13-214ENST00000569455 DENND3A2RUS2 1198 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 ESPNB1AK53 854 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 H3BRB1 525 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 MAGEB2O15479 319 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 TEX33O43247 280 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 TGFB1I1O43294 461 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 MMP3P08254 477 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 ZNF865P0CJ78 1059 aaPredicted RBP8.37□□□□□ -1.07
CDH13-214ENST00000569455 HOXD8P13378 290 aaPredicted RBP8.37□□□□□ -1.07
CDH13-214ENST00000569455 CCL5P13501 91 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 AKR1A1P14550 325 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 CYP2C19P33261 490 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 PSMC2P35998 433 aaKnown RBP8.37□□□□□ -1.07
CDH13-214ENST00000569455 ARL2P36404 184 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 PBX1P40424 430 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 GJA8P48165 433 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 CPT1AP50416 773 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 STRN3Q13033 797 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 MXD4Q14582 209 aaPredicted RBP8.37□□□□□ -1.07
CDH13-214ENST00000569455 CCL14Q16627 93 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 VWA3BQ502W6 1294 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 TMEM63BQ5T3F8 832 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 GJC2Q5T442 439 aaPredicted RBP8.37□□□□□ -1.07
CDH13-214ENST00000569455 GPR153Q6NV75 609 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 TRIM50Q86XT4 487 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 SLC9A9Q8IVB4 645 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 LRRC8AQ8IWT6 810 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 C12orf56Q8IXR9 622 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 ANKLE1Q8NAG6 615 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 RETREG2Q8NC44 543 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 TMEM161BQ8NDZ6 487 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 CCDC112Q8NEF3 446 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 SH3TC2Q8TF17 1288 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 KCNN1Q92952 543 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 TMEM143Q96AN5 459 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 EEF2KMTQ96G04 330 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 CEP89Q96ST8 783 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 NUP58Q9BVL2 599 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDH13-214ENST00000569455 RNF208Q9H0X6 261 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 NDST4Q9H3R1 872 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 TUT1Q9H6E5 874 aaKnown RBP8.37□□□□□ -1.07
CDH13-214ENST00000569455 AGPAT3Q9NRZ7 376 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 FLRT1Q9NZU1 646 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 ARMCX3Q9UH62 379 aaPredicted RBP8.37□□□□□ -1.07
CDH13-214ENST00000569455 TBX20Q9UMR3 447 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 FRMD4BQ9Y2L6 1034 aa8.37□□□□□ -1.07
CDH13-214ENST00000569455 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDH13-214ENST00000569455 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDH13-214ENST00000569455 IGKV6-21A0A0C4DH24 114 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 LRRIQ4A6NIV6 560 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 A6NJR5 290 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 CLIC2O15247 247 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 ASAP2O43150 1006 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 DYNC1LI2O43237 492 aaPredicted RBP8.36□□□□□ -1.07
CDH13-214ENST00000569455 EXOC3O60645 756 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 DUSP11O75319 330 aaKnown RBP8.36□□□□□ -1.07
CDH13-214ENST00000569455 SGPL1O95470 568 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 GLRA2P23416 452 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 NKX3-2P78367 333 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 KCNA1Q09470 495 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 TBX2Q13207 712 aaPredicted RBP8.36□□□□□ -1.07
CDH13-214ENST00000569455 TFDP1Q14186 410 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 PRAMEF19Q5SWL8 479 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 CEP135Q66GS9 1140 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 TLK2Q86UE8 772 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 CNGA4Q8IV77 575 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 MAP4K3Q8IVH8 894 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 KSR1Q8IVT5 923 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 TRIM59Q8IWR1 403 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.36□□□□□ -1.07
CDH13-214ENST00000569455 FAM186BQ8IYM0 893 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 ARRDC4Q8NCT1 418 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 CACTINQ8WUQ7 758 aaKnown RBP8.36□□□□□ -1.07
CDH13-214ENST00000569455 TMEM174Q8WUU8 243 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 PSPC1Q8WXF1 523 aaKnown RBP8.36□□□□□ -1.07
CDH13-214ENST00000569455 BSNDQ8WZ55 320 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 CCDC51Q96ER9 411 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 PCMTD1Q96MG8 357 aaPredicted RBP8.36□□□□□ -1.07
CDH13-214ENST00000569455 ERGIC2Q96RQ1 377 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 C16orf70Q9BSU1 422 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 CRISPLD2Q9H0B8 497 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 C2orf40Q9H1Z8 148 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 SUGCTQ9HAC7 445 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 ARHGAP28Q9P2N2 729 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 DDX20Q9UHI6 824 aaKnown RBP8.36□□□□□ -1.07
CDH13-214ENST00000569455 GNEQ9Y223 722 aaKnown RBP8.36□□□□□ -1.07
CDH13-214ENST00000569455 NR2E3Q9Y5X4 410 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 DNAH12Q6ZR08 3092 aa8.36□□□□□ -1.07
CDH13-214ENST00000569455 VCANP13611 3396 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms