RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 KLHL5Q96PQ7 755 aa13.46□□□□□ -0.25
VPS9D1-207ENST00000568691 RPP25Q9BUL9 199 aaKnown RBP13.46□□□□□ -0.25
VPS9D1-207ENST00000568691 LRRC2Q9BYS8 371 aa13.46□□□□□ -0.25
VPS9D1-207ENST00000568691 EPC1Q9H2F5 836 aa13.46□□□□□ -0.25
VPS9D1-207ENST00000568691 LY9Q9HBG7 655 aa13.46□□□□□ -0.25
VPS9D1-207ENST00000568691 JPH1Q9HDC5 661 aaPredicted RBP13.46□□□□□ -0.25
VPS9D1-207ENST00000568691 JADE2Q9NQC1 790 aa13.46□□□□□ -0.25
VPS9D1-207ENST00000568691 SLC9A2Q9UBY0 812 aa13.46□□□□□ -0.25
VPS9D1-207ENST00000568691 SMG5Q9UPR3 1016 aaKnown RBP13.46□□□□□ -0.25
VPS9D1-207ENST00000568691 KLF18A0A0U1RQI7 1052 aa13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 GOLGA8BA8MQT2 603 aa13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 ANHXE9PGG2 379 aa13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 SPTLC1O15269 473 aa13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 C22orf31O95567 290 aa13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 CCNE2O96020 404 aa13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 CNPP09543 421 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 GJB2P29033 226 aa13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 PDIA3P30101 505 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 POLGP54098 1239 aaPredicted RBP13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 STARD6P59095 220 aa13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 SCRN1Q12765 414 aa13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 TROAPQ12815 778 aa13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 NFKBIBQ15653 356 aa13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 APOA5Q6Q788 366 aa13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 C15orf39Q6ZRI6 1047 aa13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 IGDCC4Q8TDY8 1250 aa13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 TNPO1Q92973 898 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 IGSF21Q96ID5 467 aa13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 UBAC1Q9BSL1 405 aa13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 DDX23Q9BUQ8 820 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 ADAMTS10Q9H324 1103 aa13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 WDR6Q9NNW5 1121 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-207ENST00000568691 MEIS3P2A8K0S8 358 aa13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 IFIT3O14879 490 aaKnown RBP13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 HOXA2O43364 376 aa13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 CDKL5O76039 1030 aa13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 HTR4Q13639 388 aa13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 UBE2SQ16763 222 aa13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 DCLRE1AQ6PJP8 1040 aa13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 GPR161Q8N6U8 529 aaKnown RBP13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 RNF169Q8NCN4 708 aa13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 CMASQ8NFW8 434 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 ZNF707Q96C28 371 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 TMEM169Q96HH4 297 aa13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 CHAMP1Q96JM3 812 aa13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 CDHR1Q96JP9 859 aa13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 AZI2Q9H6S1 392 aa13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 NRDE2Q9H7Z3 1164 aa13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 SLC2A4RGQ9NR83 387 aa13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 KCNH7Q9NS40 1196 aa13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 FBXO4Q9UKT5 387 aa13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 CNOT1A5YKK6 2376 aaKnown RBP13.44□□□□□ -0.26
VPS9D1-207ENST00000568691 PATJQ8NI35 1801 aa13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 CLUHO75153 1309 aa13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 A0A0U1RQF3 1178 aa13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 SLC30A4O14863 429 aa13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 STX6O43752 255 aa13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 PAPLNO95428 1278 aa13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 GALTP07902 379 aa13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 FGFR4P22455 802 aa13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 GBP2P32456 591 aaPredicted RBP13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 CSTF1Q05048 431 aaKnown RBP13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 TRAF1Q13077 416 aa13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 CPLX2Q6PUV4 134 aaKnown RBP13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 CCDC60Q8IWA6 550 aaPredicted RBP13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 ABI1Q8IZP0 508 aa13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 LINC01465Q8N7H1 131 aa13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 NECAB1Q8N987 351 aa13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 NSUN7Q8NE18 718 aaKnown RBP13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 ZNF668Q96K58 619 aaPredicted RBP13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 DNAJB4Q9UDY4 337 aa13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 USP18Q9UMW8 372 aa13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 PCDHGA2Q9Y5H1 932 aa13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 ATP6V1DQ9Y5K8 247 aa13.43□□□□□ -0.26
VPS9D1-207ENST00000568691 EVPLQ92817 2033 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 STK36Q9NRP7 1315 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 CCDC196A0A1B0GTZ2 297 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 CCDC69A6NI79 296 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 SHISA7A6NL88 538 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 GOLGA6L22H0YM25 854 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 ZBTB43O43298 467 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 HBP1O60381 514 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 ZC3H11AO75152 810 aaKnown RBP eCLIP13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 RFPL2O75678 378 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 CALM1P0DP23 149 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 CALM2P0DP24 149 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 CALM3P0DP25 149 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 MYBP10242 640 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 SYT1P21579 422 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 RFX1P22670 979 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 SLC11A1P49279 550 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 ALDH7A1P49419 539 aaKnown RBP13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 GPC5P78333 572 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 ODR4Q5SWX8 454 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 TSSK4Q6SA08 328 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 ABHD15Q6UXT9 468 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 SYNE3Q6ZMZ3 975 aa13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 LARP6Q9BRS8 491 aaKnown RBP13.42□□□□□ -0.26
VPS9D1-207ENST00000568691 BRPF3Q9ULD4 1205 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms