RNA–Protein interactions for RNA: ENST00000568382.5

SCAPER-219, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 544 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-219	ENST00000568382	TMEM161A	Q9NX61	479 aa		13.65	□□□□□ -0.22
SCAPER-219	ENST00000568382	MTCH2	Q9Y6C9	303 aa		13.65	□□□□□ -0.22
SCAPER-219	ENST00000568382	COL4A4	P53420	1690 aa	Predicted RBP	13.65	□□□□□ -0.22
SCAPER-219	ENST00000568382	CHD7	Q9P2D1	2997 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382		A0A0U1RQF3	1178 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	YEATS4	O95619	227 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	EYA4	O95677	639 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	FGFR1	P11362	822 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	BMPR1A	P36894	532 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	PHKA2	P46019	1235 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	PKP1	Q13835	747 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	TFDP1	Q14186	410 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	PTPA	Q15257	358 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	CCDC85B	Q15834	202 aa	Predicted RBP	13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	PAN2	Q504Q3	1202 aa	Known RBP	13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	HYI	Q5T013	277 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	MCPH1	Q8NEM0	835 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	FBXO22	Q8NEZ5	403 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	GDPD5	Q8WTR4	605 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	PPM1E	Q8WY54	764 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	CLP1	Q92989	425 aa	Known RBP	13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	SAMD11	Q96NU1	681 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	PLIN2	Q99541	437 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	RNF19A	Q9NV58	838 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	DACT1	Q9NYF0	836 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	TFIP11	Q9UBB9	837 aa	Known RBP	13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	DNM3	Q9UQ16	869 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	PIN4	Q9Y237	131 aa	Known RBP	13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	MRPL42	Q9Y6G3	142 aa	Known RBP	13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	KIAA1671	Q9BY89	1806 aa		13.64	□□□□□ -0.23
SCAPER-219	ENST00000568382	HOXA11	P31270	313 aa	Predicted RBP	13.63	□□□□□ -0.23
SCAPER-219	ENST00000568382	CEBPZ	Q03701	1054 aa	Known RBP	13.63	□□□□□ -0.23
SCAPER-219	ENST00000568382	MBTD1	Q05BQ5	628 aa		13.63	□□□□□ -0.23
SCAPER-219	ENST00000568382	SLC39A14	Q15043	492 aa		13.63	□□□□□ -0.23
SCAPER-219	ENST00000568382	ZRSR1	Q15695	479 aa	Known RBP	13.63	□□□□□ -0.23
SCAPER-219	ENST00000568382	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.63	□□□□□ -0.23
SCAPER-219	ENST00000568382	TWF2	Q6IBS0	349 aa	Known RBP	13.63	□□□□□ -0.23
SCAPER-219	ENST00000568382	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.63	□□□□□ -0.23
SCAPER-219	ENST00000568382	ZNF598	Q86UK7	904 aa	Known RBP	13.63	□□□□□ -0.23
SCAPER-219	ENST00000568382	SPATA32	Q96LK8	384 aa		13.63	□□□□□ -0.23
SCAPER-219	ENST00000568382	AK8	Q96MA6	479 aa		13.63	□□□□□ -0.23
SCAPER-219	ENST00000568382	TRAIP	Q9BWF2	469 aa		13.63	□□□□□ -0.23
SCAPER-219	ENST00000568382	AGPAT5	Q9NUQ2	364 aa		13.63	□□□□□ -0.23
SCAPER-219	ENST00000568382	ZDHHC9	Q9Y397	364 aa		13.63	□□□□□ -0.23
SCAPER-219	ENST00000568382	COL6A3	P12111	3177 aa		13.63	□□□□□ -0.23
SCAPER-219	ENST00000568382	TBKBP1	A7MCY6	615 aa		13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	C5orf67	F2Z3F1	127 aa		13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382		H3BNC9	293 aa		13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	INO80B-WBP1	J3KQ70	363 aa		13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	SPTLC2	O15270	562 aa		13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	EOMES	O95936	686 aa		13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	ATF7	P17544	494 aa	Predicted RBP	13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	ME1	P48163	572 aa		13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	DNM1	Q05193	864 aa	Known RBP	13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	GPM6B	Q13491	265 aa		13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	CABP7	Q86V35	215 aa		13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	KRI1	Q8N9T8	703 aa	Known RBP	13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	RNF169	Q8NCN4	708 aa		13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	BSND	Q8WZ55	320 aa		13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	CASD1	Q96PB1	797 aa		13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	NFKBIZ	Q9BYH8	718 aa		13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	FAM105A	Q9NUU6	356 aa		13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	MYH15	Q9Y2K3	1946 aa		13.62	□□□□□ -0.23
SCAPER-219	ENST00000568382	LRRIQ4	A6NIV6	560 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	GTPBP6	O43824	516 aa	Predicted RBP	13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	TSPAN1	O60635	241 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	ZNF623	O75123	536 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	PPP6R2	O75170	966 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	ERLIN2	O94905	339 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	RB1	P06400	928 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	MARCKS	P29966	332 aa	Predicted RBP	13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	CTNNB1	P35222	781 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	LONP1	P36776	959 aa	Known RBP	13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	TXLNA	P40222	546 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	NASP	P49321	788 aa	Predicted RBP	13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	AMHR2	Q16671	573 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	LONRF3	Q496Y0	759 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	CLLU1OS	Q5K130	101 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	UBXN11	Q5T124	520 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	RINT1	Q6NUQ1	792 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	LRRC55	Q6ZSA7	311 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	C1orf186	Q6ZWK4	172 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	MICALL1	Q8N3F8	863 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	KCTD17	Q8N5Z5	321 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	USP28	Q96RU2	1077 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	NT5C3A	Q9H0P0	336 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	TYW1	Q9NV66	732 aa	Known RBP	13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	LMCD1	Q9NZU5	365 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	HCST	Q9UBK5	93 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	FBXO2	Q9UK22	296 aa	Predicted RBP	13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	RCOR1	Q9UKL0	485 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	RWDD3	Q9Y3V2	267 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	PCDHB2	Q9Y5E7	798 aa		13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.61	□□□□□ -0.23
SCAPER-219	ENST00000568382	MEIS3P2	A8K0S8	358 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	HOXA2	O43364	376 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	SLC26A4	O43511	780 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms