RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 TMEM117Q9H0C3 514 aa15.16■□□□□ 0.02
CNOT1-206ENST00000564557 BHMT2Q9H2M3 363 aa15.16■□□□□ 0.02
CNOT1-206ENST00000564557 PCDHB12Q9Y5F1 795 aa15.16■□□□□ 0.02
CNOT1-206ENST00000564557 ARID2Q68CP9 1835 aa15.15■□□□□ 0.02
CNOT1-206ENST00000564557 PP2D1A8MPX8 630 aa15.15■□□□□ 0.02
CNOT1-206ENST00000564557 STX6O43752 255 aa15.15■□□□□ 0.02
CNOT1-206ENST00000564557 FGFR1P11362 822 aa15.15■□□□□ 0.02
CNOT1-206ENST00000564557 CYP11B2P19099 503 aa15.15■□□□□ 0.02
CNOT1-206ENST00000564557 CDC25AP30304 524 aa15.15■□□□□ 0.02
CNOT1-206ENST00000564557 ARL2P36404 184 aa15.15■□□□□ 0.02
CNOT1-206ENST00000564557 GATMP50440 423 aa15.15■□□□□ 0.02
CNOT1-206ENST00000564557 PTENP60484 403 aa15.15■□□□□ 0.02
CNOT1-206ENST00000564557 POU5F1BQ06416 359 aa15.15■□□□□ 0.02
CNOT1-206ENST00000564557 SF3A1Q15459 793 aaKnown RBP15.15■□□□□ 0.02
CNOT1-206ENST00000564557 TMEM132AQ24JP5 1023 aa15.15■□□□□ 0.02
CNOT1-206ENST00000564557 CRIPAKQ8N1N5 446 aa15.15■□□□□ 0.02
CNOT1-206ENST00000564557 CLP1Q92989 425 aaKnown RBP15.15■□□□□ 0.02
CNOT1-206ENST00000564557 PGBD4Q96DM1 585 aa15.15■□□□□ 0.02
CNOT1-206ENST00000564557 IFT74Q96LB3 600 aa15.15■□□□□ 0.02
CNOT1-206ENST00000564557 AK8Q96MA6 479 aa15.15■□□□□ 0.02
CNOT1-206ENST00000564557 NT5C3AQ9H0P0 336 aa15.15■□□□□ 0.02
CNOT1-206ENST00000564557 ZSCAN16Q9H4T2 348 aaPredicted RBP15.15■□□□□ 0.02
CNOT1-206ENST00000564557 RC3H2Q9HBD1 1191 aaKnown RBP15.15■□□□□ 0.02
CNOT1-206ENST00000564557 PCDHB8Q9UN66 801 aa15.15■□□□□ 0.02
CNOT1-206ENST00000564557 MRPL42Q9Y6G3 142 aaKnown RBP15.15■□□□□ 0.02
CNOT1-206ENST00000564557 LPXNO60711 386 aa15.14■□□□□ 0.01
CNOT1-206ENST00000564557 EYA4O95677 639 aa15.14■□□□□ 0.01
CNOT1-206ENST00000564557 SSBP05455 408 aaKnown RBP eCLIP15.14■□□□□ 0.01
CNOT1-206ENST00000564557 PDIA4P13667 645 aaKnown RBP15.14■□□□□ 0.01
CNOT1-206ENST00000564557 GLRA2P23416 452 aa15.14■□□□□ 0.01
CNOT1-206ENST00000564557 AXLP30530 894 aa15.14■□□□□ 0.01
CNOT1-206ENST00000564557 UBA7P41226 1012 aa15.14■□□□□ 0.01
CNOT1-206ENST00000564557 CAPSQ13938 189 aa15.14■□□□□ 0.01
CNOT1-206ENST00000564557 PPP2R5AQ15172 486 aa15.14■□□□□ 0.01
CNOT1-206ENST00000564557 IL17AQ16552 155 aa15.14■□□□□ 0.01
CNOT1-206ENST00000564557 NAALADL2Q58DX5 795 aa15.14■□□□□ 0.01
CNOT1-206ENST00000564557 DEPTORQ8TB45 409 aa15.14■□□□□ 0.01
CNOT1-206ENST00000564557 ASAP3Q8TDY4 903 aa15.14■□□□□ 0.01
CNOT1-206ENST00000564557 MRPL38Q96DV4 380 aaKnown RBP15.14■□□□□ 0.01
CNOT1-206ENST00000564557 CALML4Q96GE6 196 aa15.14■□□□□ 0.01
CNOT1-206ENST00000564557 C2orf40Q9H1Z8 148 aa15.14■□□□□ 0.01
CNOT1-206ENST00000564557 GPRC5CQ9NQ84 441 aa15.14■□□□□ 0.01
CNOT1-206ENST00000564557 AGPAT5Q9NUQ2 364 aa15.14■□□□□ 0.01
CNOT1-206ENST00000564557 FAM105AQ9NUU6 356 aa15.14■□□□□ 0.01
CNOT1-206ENST00000564557 COL4A6Q14031 1691 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 E9PMD0 336 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 C5orf67F2Z3F1 127 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 ECM1Q16610 540 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 CSPP1Q1MSJ5 1256 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 TIGD5Q53EQ6 642 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 NOTUMQ6P988 496 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 GLB1LQ6UWU2 654 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 CABP7Q86V35 215 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 HACE1Q8IYU2 909 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 LRRC43Q8N309 656 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 KCTD17Q8N5Z5 321 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 CNNM3Q8NE01 707 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 KIFAP3Q92845 792 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 TRAIPQ9BWF2 469 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 MRPL9Q9BYD2 267 aaKnown RBP15.13■□□□□ 0.01
CNOT1-206ENST00000564557 NFKBIZQ9BYH8 718 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 TRIM6Q9C030 488 aaPredicted RBP15.13■□□□□ 0.01
CNOT1-206ENST00000564557 LMAN2LQ9H0V9 348 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 MINDY3Q9H8M7 445 aa15.13■□□□□ 0.01
CNOT1-206ENST00000564557 TYW1Q9NV66 732 aaKnown RBP15.13■□□□□ 0.01
CNOT1-206ENST00000564557 NLRC5Q86WI3 1866 aa15.12■□□□□ 0.01
CNOT1-206ENST00000564557 LAG3P18627 525 aa15.12■□□□□ 0.01
CNOT1-206ENST00000564557 LIG1P18858 919 aa15.12■□□□□ 0.01
CNOT1-206ENST00000564557 LONP1P36776 959 aaKnown RBP15.12■□□□□ 0.01
CNOT1-206ENST00000564557 CEBPZQ03701 1054 aaKnown RBP15.12■□□□□ 0.01
CNOT1-206ENST00000564557 LONRF3Q496Y0 759 aa15.12■□□□□ 0.01
CNOT1-206ENST00000564557 THNSL1Q8IYQ7 743 aa15.12■□□□□ 0.01
CNOT1-206ENST00000564557 HELQQ8TDG4 1101 aa15.12■□□□□ 0.01
CNOT1-206ENST00000564557 RSPH1Q8WYR4 309 aa15.12■□□□□ 0.01
CNOT1-206ENST00000564557 P2RX5Q93086 422 aa15.12■□□□□ 0.01
CNOT1-206ENST00000564557 CCDC51Q96ER9 411 aa15.12■□□□□ 0.01
CNOT1-206ENST00000564557 PLIN2Q99541 437 aa15.12■□□□□ 0.01
CNOT1-206ENST00000564557 PRMT7Q9NVM4 692 aaPredicted RBP15.12■□□□□ 0.01
CNOT1-206ENST00000564557 THEGQ9P2T0 379 aa15.12■□□□□ 0.01
CNOT1-206ENST00000564557 MTMR6Q9Y217 621 aa15.12■□□□□ 0.01
CNOT1-206ENST00000564557 PCDHB2Q9Y5E7 798 aa15.12■□□□□ 0.01
CNOT1-206ENST00000564557 RALGAPA2Q2PPJ7 1873 aa15.12■□□□□ 0.01
CNOT1-206ENST00000564557 PRRC2BQ5JSZ5 2229 aaKnown RBP15.11■□□□□ 0.01
CNOT1-206ENST00000564557 SLC26A4O43511 780 aa15.11■□□□□ 0.01
CNOT1-206ENST00000564557 ZNF623O75123 536 aa15.11■□□□□ 0.01
CNOT1-206ENST00000564557 CSPG5O95196 566 aa15.11■□□□□ 0.01
CNOT1-206ENST00000564557 NAMPTP43490 491 aa15.11■□□□□ 0.01
CNOT1-206ENST00000564557 RNASELQ05823 741 aaKnown RBP15.11■□□□□ 0.01
CNOT1-206ENST00000564557 MBTD1Q05BQ5 628 aa15.11■□□□□ 0.01
CNOT1-206ENST00000564557 RESTQ13127 1097 aa15.11■□□□□ 0.01
CNOT1-206ENST00000564557 MAPK6Q16659 721 aa15.11■□□□□ 0.01
CNOT1-206ENST00000564557 ASTLQ6HA08 431 aaPredicted RBP15.11■□□□□ 0.01
CNOT1-206ENST00000564557 KLHL23Q8NBE8 558 aa15.11■□□□□ 0.01
CNOT1-206ENST00000564557 SPRYD3Q8NCJ5 442 aa15.11■□□□□ 0.01
CNOT1-206ENST00000564557 URGCPQ8TCY9 931 aa15.11■□□□□ 0.01
CNOT1-206ENST00000564557 PPP2R3CQ969Q6 453 aa15.11■□□□□ 0.01
CNOT1-206ENST00000564557 CPB2Q96IY4 423 aa15.11■□□□□ 0.01
CNOT1-206ENST00000564557 CASD1Q96PB1 797 aa15.11■□□□□ 0.01
CNOT1-206ENST00000564557 ALG13Q9NP73 1137 aaKnown RBP15.11■□□□□ 0.01
CNOT1-206ENST00000564557 PUF60Q9UHX1 559 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms