RNA–Protein interactions for RNA: ENST00000562474.1

TSC2-218, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-218ENST00000562474 TIFAQ96CG3 184 aa12.42□□□□□ -0.42
TSC2-218ENST00000562474 REEP2Q9BRK0 252 aa12.42□□□□□ -0.42
TSC2-218ENST00000562474 ZHX3Q9H4I2 956 aa12.42□□□□□ -0.42
TSC2-218ENST00000562474 RCOR1Q9UKL0 485 aa12.42□□□□□ -0.42
TSC2-218ENST00000562474 RBM19Q9Y4C8 960 aaKnown RBP12.42□□□□□ -0.42
TSC2-218ENST00000562474 PRRC2BQ5JSZ5 2229 aaKnown RBP12.42□□□□□ -0.42
TSC2-218ENST00000562474 RFXAPO00287 272 aa12.41□□□□□ -0.42
TSC2-218ENST00000562474 GAS2O43903 313 aaKnown RBP12.41□□□□□ -0.42
TSC2-218ENST00000562474 CSPG5O95196 566 aa12.41□□□□□ -0.42
TSC2-218ENST00000562474 GJB5O95377 273 aa12.41□□□□□ -0.42
TSC2-218ENST00000562474 KRT18P05783 430 aaKnown RBP12.41□□□□□ -0.42
TSC2-218ENST00000562474 SFPQP23246 707 aaKnown RBP eCLIP12.41□□□□□ -0.42
TSC2-218ENST00000562474 CASP1P29466 404 aa12.41□□□□□ -0.42
TSC2-218ENST00000562474 SMAD3P84022 425 aaKnown RBP12.41□□□□□ -0.42
TSC2-218ENST00000562474 TFDP1Q14186 410 aa12.41□□□□□ -0.42
TSC2-218ENST00000562474 MXD4Q14582 209 aaPredicted RBP12.41□□□□□ -0.42
TSC2-218ENST00000562474 TWF2Q6IBS0 349 aaKnown RBP12.41□□□□□ -0.42
TSC2-218ENST00000562474 GRAMD1CQ8IYS0 662 aa12.41□□□□□ -0.42
TSC2-218ENST00000562474 DEPTORQ8TB45 409 aa12.41□□□□□ -0.42
TSC2-218ENST00000562474 KCNG4Q8TDN1 519 aa12.41□□□□□ -0.42
TSC2-218ENST00000562474 YME1L1Q96TA2 773 aa12.41□□□□□ -0.42
TSC2-218ENST00000562474 TSPYL2Q9H2G4 693 aaPredicted RBP12.41□□□□□ -0.42
TSC2-218ENST00000562474 RNF19AQ9NV58 838 aa12.41□□□□□ -0.42
TSC2-218ENST00000562474 CCDC39Q9UFE4 941 aa12.41□□□□□ -0.42
TSC2-218ENST00000562474 MSRAQ9UJ68 235 aa12.41□□□□□ -0.42
TSC2-218ENST00000562474 CFAP45Q9UL16 551 aa12.41□□□□□ -0.42
TSC2-218ENST00000562474 SQORQ9Y6N5 450 aa12.41□□□□□ -0.42
TSC2-218ENST00000562474 LAMA2P24043 3122 aaKnown RBP12.4□□□□□ -0.42
TSC2-218ENST00000562474 A0A1B0GVL5 298 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 EPOPA6NHQ4 379 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 MYMKA6NI61 221 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 C9IYK1 514 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 SLC16A4O15374 487 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 TSPAN1O60635 241 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 EFCAB14O75071 495 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 ERLIN2O94905 339 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 PDIA4P13667 645 aaKnown RBP12.4□□□□□ -0.42
TSC2-218ENST00000562474 ARF4P18085 180 aaPredicted RBP12.4□□□□□ -0.42
TSC2-218ENST00000562474 NUCB2P80303 420 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 AMHR2Q16671 573 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 ZNF697Q5TEC3 545 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 PPP2R2DQ66LE6 453 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 SRGAP1Q7Z6B7 1085 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 EXOC8Q8IYI6 725 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 TOP1MTQ969P6 601 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 APOL6Q9BWW8 343 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 EIF2AQ9BY44 585 aaKnown RBP12.4□□□□□ -0.42
TSC2-218ENST00000562474 RGS18Q9NS28 235 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 AGPAT5Q9NUQ2 364 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 LRFN2Q9ULH4 789 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 PCDHA11Q9Y5I1 949 aa12.4□□□□□ -0.42
TSC2-218ENST00000562474 LINC01553A4QN01 128 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 POLR2DO15514 142 aaKnown RBP12.39□□□□□ -0.43
TSC2-218ENST00000562474 ASAP2O43150 1006 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 FAM13AO94988 1023 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 PRKCBP05771 671 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 ZSCAN20P17040 1043 aaPredicted RBP12.39□□□□□ -0.43
TSC2-218ENST00000562474 ATF7P17544 494 aaPredicted RBP12.39□□□□□ -0.43
TSC2-218ENST00000562474 HOXA11P31270 313 aaPredicted RBP12.39□□□□□ -0.43
TSC2-218ENST00000562474 NAMPTP43490 491 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 NPTX2P47972 431 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 SARSP49591 514 aaKnown RBP12.39□□□□□ -0.43
TSC2-218ENST00000562474 GIT2Q14161 759 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 RAB30Q15771 203 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 E2F4Q16254 413 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 TMEM132AQ24JP5 1023 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 UBXN11Q5T124 520 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 RESP18Q5W5W9 173 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 EEF1DP3Q658K8 133 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 TAS1R3Q7RTX0 852 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 ECHDC2Q86YB7 292 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 ZBTB8OSQ8IWT0 167 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 DEFB123Q8N688 67 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 IFT74Q96LB3 600 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 C17orf80Q9BSJ5 609 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 FTHL17Q9BXU8 183 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 GOLPH3LQ9H4A5 285 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 PRDM12Q9H4Q4 367 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 TBC1D7Q9P0N9 293 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 HES2Q9Y543 173 aa12.39□□□□□ -0.43
TSC2-218ENST00000562474 MORC2Q9Y6X9 1032 aaPredicted RBP12.39□□□□□ -0.43
TSC2-218ENST00000562474 TBKBP1A7MCY6 615 aa12.38□□□□□ -0.43
TSC2-218ENST00000562474 NPTXRO95502 500 aa12.38□□□□□ -0.43
TSC2-218ENST00000562474 GUCY2CP25092 1073 aa12.38□□□□□ -0.43
TSC2-218ENST00000562474 NMT1P30419 496 aaKnown RBP12.38□□□□□ -0.43
TSC2-218ENST00000562474 AFMP43652 599 aa12.38□□□□□ -0.43
TSC2-218ENST00000562474 TAP1Q03518 808 aa12.38□□□□□ -0.43
TSC2-218ENST00000562474 DMP1Q13316 513 aaPredicted RBP12.38□□□□□ -0.43
TSC2-218ENST00000562474 GRIN2CQ14957 1233 aa12.38□□□□□ -0.43
TSC2-218ENST00000562474 ODR4Q5SWX8 454 aa12.38□□□□□ -0.43
TSC2-218ENST00000562474 CDCA2Q69YH5 1023 aaPredicted RBP12.38□□□□□ -0.43
TSC2-218ENST00000562474 ATL3Q6DD88 541 aa12.38□□□□□ -0.43
TSC2-218ENST00000562474 CCDC73Q6ZRK6 1079 aa12.38□□□□□ -0.43
TSC2-218ENST00000562474 SLC24A5Q71RS6 500 aa12.38□□□□□ -0.43
TSC2-218ENST00000562474 SFR1Q86XK3 245 aa12.38□□□□□ -0.43
TSC2-218ENST00000562474 NPAS4Q8IUM7 802 aa12.38□□□□□ -0.43
TSC2-218ENST00000562474 FSIP1Q8NA03 581 aa12.38□□□□□ -0.43
TSC2-218ENST00000562474 PHOSPHO2Q8TCD6 241 aa12.38□□□□□ -0.43
TSC2-218ENST00000562474 HELQQ8TDG4 1101 aa12.38□□□□□ -0.43
TSC2-218ENST00000562474 GDPD5Q8WTR4 605 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms