RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 CDK8P49336 464 aa20.11■□□□□ 0.81
BBS4-204ENST00000562084 CCDC15Q0P6D6 951 aa20.11■□□□□ 0.81
BBS4-204ENST00000562084 CAPRIN2Q6IMN6 1127 aaKnown RBP20.11■□□□□ 0.81
BBS4-204ENST00000562084 RHOT2Q8IXI1 618 aa20.11■□□□□ 0.81
BBS4-204ENST00000562084 UBL4BQ8N7F7 174 aa20.11■□□□□ 0.81
BBS4-204ENST00000562084 NLGN2Q8NFZ4 835 aa20.11■□□□□ 0.81
BBS4-204ENST00000562084 RPGRQ92834 1020 aaKnown RBP20.11■□□□□ 0.81
BBS4-204ENST00000562084 RAB3IPQ96QF0 476 aaPredicted RBP20.11■□□□□ 0.81
BBS4-204ENST00000562084 RXFP1Q9HBX9 757 aa20.11■□□□□ 0.81
BBS4-204ENST00000562084 VAT1LQ9HCJ6 419 aa20.11■□□□□ 0.81
BBS4-204ENST00000562084 GCNT4Q9P109 453 aa20.11■□□□□ 0.81
BBS4-204ENST00000562084 SNX24Q9Y343 169 aa20.11■□□□□ 0.81
BBS4-204ENST00000562084 PFASO15067 1338 aa20.1■□□□□ 0.81
BBS4-204ENST00000562084 E7ENQ6 273 aa20.1■□□□□ 0.81
BBS4-204ENST00000562084 E9PMD0 336 aa20.1■□□□□ 0.81
BBS4-204ENST00000562084 IGF2BP3O00425 579 aaKnown RBP eCLIP20.1■□□□□ 0.81
BBS4-204ENST00000562084 RIPK2O43353 540 aa20.1■□□□□ 0.81
BBS4-204ENST00000562084 HOXA10P31260 410 aaPredicted RBP20.1■□□□□ 0.81
BBS4-204ENST00000562084 PPARDQ03181 441 aa20.1■□□□□ 0.81
BBS4-204ENST00000562084 PRPF4BQ13523 1007 aaKnown RBP20.1■□□□□ 0.81
BBS4-204ENST00000562084 AUHQ13825 339 aaKnown RBP20.1■□□□□ 0.81
BBS4-204ENST00000562084 C11orf63Q6NUN7 778 aa20.1■□□□□ 0.81
BBS4-204ENST00000562084 LNX1Q8TBB1 728 aaPredicted RBP20.1■□□□□ 0.81
BBS4-204ENST00000562084 MORC4Q8TE76 937 aa20.1■□□□□ 0.81
BBS4-204ENST00000562084 DYDC1Q8WWB3 177 aa20.1■□□□□ 0.81
BBS4-204ENST00000562084 SPDL1Q96EA4 605 aa20.1■□□□□ 0.81
BBS4-204ENST00000562084 SAAL1Q96ER3 474 aa20.1■□□□□ 0.81
BBS4-204ENST00000562084 SERPINB12Q96P63 405 aa20.1■□□□□ 0.81
BBS4-204ENST00000562084 STK33Q9BYT3 514 aa20.1■□□□□ 0.81
BBS4-204ENST00000562084 PPP1R9AQ9ULJ8 1098 aa20.1■□□□□ 0.81
BBS4-204ENST00000562084 PLIN4Q96Q06 1357 aa20.1■□□□□ 0.81
BBS4-204ENST00000562084 ALAS1P13196 640 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 NPR1P16066 1061 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 VCAM1P19320 739 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 CTNNA2P26232 953 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 SLC12A3P55017 1021 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 RPS8P62241 208 aaKnown RBP20.09■□□□□ 0.81
BBS4-204ENST00000562084 KCNJ2P63252 427 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 MAP2K1Q02750 393 aaPredicted RBP20.09■□□□□ 0.81
BBS4-204ENST00000562084 BLMHQ13867 455 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 PTPROQ16827 1216 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 SLC4A8Q2Y0W8 1093 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 ASRGL1Q7L266 308 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 CELF1Q92879 486 aaKnown RBP20.09■□□□□ 0.81
BBS4-204ENST00000562084 GRAMD1AQ96CP6 724 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 MASTLQ96GX5 879 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 ZNF570Q96NI8 536 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 DHX36Q9H2U1 1008 aaKnown RBP20.09■□□□□ 0.81
BBS4-204ENST00000562084 NR2E1Q9Y466 385 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 L3MBTL1Q9Y468 752 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 POTEFA5A3E0 1075 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 ANKRD62A6NC57 917 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 ABLIM1O14639 778 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 POTEIP0CG38 1075 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 POTEJP0CG39 1038 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 ATP2A2P16615 1042 aaKnown RBP20.09■□□□□ 0.81
BBS4-204ENST00000562084 KLRK1P26718 216 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 MSH2P43246 934 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 NFIL3Q16649 462 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 POTEEQ6S8J3 1075 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 SLC44A5Q8NCS7 719 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 SLC35C1Q96A29 364 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 SH3GL3Q99963 347 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 SYT17Q9BSW7 474 aa20.09■□□□□ 0.81
BBS4-204ENST00000562084 BRCA1P38398 1863 aaKnown RBP20.08■□□□□ 0.81
BBS4-204ENST00000562084 PNMA6FA0A0J9YX94 578 aa20.08■□□□□ 0.81
BBS4-204ENST00000562084 EVI5O60447 810 aa20.08■□□□□ 0.81
BBS4-204ENST00000562084 DIAPH2O60879 1101 aa20.08■□□□□ 0.81
BBS4-204ENST00000562084 ATP5HO75947 161 aa20.08■□□□□ 0.81
BBS4-204ENST00000562084 CCNB1P14635 433 aa20.08■□□□□ 0.81
BBS4-204ENST00000562084 CMPK2Q5EBM0 449 aa20.08■□□□□ 0.81
BBS4-204ENST00000562084 DCAF17Q5H9S7 520 aaPredicted RBP20.08■□□□□ 0.81
BBS4-204ENST00000562084 NAIF1Q69YI7 327 aaPredicted RBP20.08■□□□□ 0.81
BBS4-204ENST00000562084 MIS18BP1Q6P0N0 1132 aa20.08■□□□□ 0.81
BBS4-204ENST00000562084 SPATA21Q7Z572 469 aa20.08■□□□□ 0.81
BBS4-204ENST00000562084 SLFN12Q8IYM2 578 aa20.08■□□□□ 0.81
BBS4-204ENST00000562084 TGFBRAP1Q8WUH2 860 aa20.08■□□□□ 0.81
BBS4-204ENST00000562084 RBM17Q96I25 401 aaKnown RBP20.08■□□□□ 0.81
BBS4-204ENST00000562084 SYT11Q9BT88 431 aa20.08■□□□□ 0.81
BBS4-204ENST00000562084 SEMA4AQ9H3S1 761 aa20.08■□□□□ 0.81
BBS4-204ENST00000562084 SLC24A3Q9HC58 644 aa20.08■□□□□ 0.81
BBS4-204ENST00000562084 USP40Q9NVE5 1235 aa20.08■□□□□ 0.81
BBS4-204ENST00000562084 DDX60LQ5H9U9 1706 aaKnown RBP20.08■□□□□ 0.8
BBS4-204ENST00000562084 USP17L5A8MUK1 530 aa20.07■□□□□ 0.8
BBS4-204ENST00000562084 NR3C1P04150 777 aa20.07■□□□□ 0.8
BBS4-204ENST00000562084 KRT13P13646 458 aa20.07■□□□□ 0.8
BBS4-204ENST00000562084 RFX1P22670 979 aa20.07■□□□□ 0.8
BBS4-204ENST00000562084 CCNHP51946 323 aaPredicted RBP20.07■□□□□ 0.8
BBS4-204ENST00000562084 CYP1B1Q16678 543 aa20.07■□□□□ 0.8
BBS4-204ENST00000562084 RNF43Q68DV7 783 aa20.07■□□□□ 0.8
BBS4-204ENST00000562084 STYK1Q6J9G0 422 aa20.07■□□□□ 0.8
BBS4-204ENST00000562084 KCTD17Q8N5Z5 321 aa20.07■□□□□ 0.8
BBS4-204ENST00000562084 OLIG1Q8TAK6 271 aa20.07■□□□□ 0.8
BBS4-204ENST00000562084 GLG1Q92896 1179 aa20.07■□□□□ 0.8
BBS4-204ENST00000562084 ART4Q93070 314 aa20.07■□□□□ 0.8
BBS4-204ENST00000562084 VTI1AQ96AJ9 217 aa20.07■□□□□ 0.8
BBS4-204ENST00000562084 ERVK-5Q9HDB9 667 aa20.07■□□□□ 0.8
BBS4-204ENST00000562084 OSGEPQ9NPF4 335 aa20.07■□□□□ 0.8
BBS4-204ENST00000562084 AKAP3O75969 853 aa20.07■□□□□ 0.8
BBS4-204ENST00000562084 RPL21P46778 160 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms