RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 CTTNQ14247 550 aaKnown RBP30.27■■■□□ 2.44
SNRPA1-215ENST00000561187 SMC1AQ14683 1233 aaKnown RBP30.27■■■□□ 2.44
SNRPA1-215ENST00000561187 SYCE2Q6PIF2 218 aa30.27■■■□□ 2.44
SNRPA1-215ENST00000561187 TMEM169Q96HH4 297 aa30.27■■■□□ 2.44
SNRPA1-215ENST00000561187 DYDC2Q96IM9 177 aa30.27■■■□□ 2.44
SNRPA1-215ENST00000561187 JPH2Q9BR39 696 aaPredicted RBP30.27■■■□□ 2.44
SNRPA1-215ENST00000561187 INO80BQ9C086 356 aaPredicted RBP30.27■■■□□ 2.44
SNRPA1-215ENST00000561187 ARIH1Q9Y4X5 557 aaPredicted RBP30.27■■■□□ 2.44
SNRPA1-215ENST00000561187 FSD2A1L4K1 749 aa30.26■■■□□ 2.43
SNRPA1-215ENST00000561187 ZBTB39O15060 712 aa30.26■■■□□ 2.43
SNRPA1-215ENST00000561187 P4HBP07237 508 aaKnown RBP30.26■■■□□ 2.43
SNRPA1-215ENST00000561187 KCNC3Q14003 757 aa30.26■■■□□ 2.43
SNRPA1-215ENST00000561187 SUSD6Q92537 303 aa30.26■■■□□ 2.43
SNRPA1-215ENST00000561187 IFT122Q9HBG6 1241 aa30.26■■■□□ 2.43
SNRPA1-215ENST00000561187 TBC1D13Q9NVG8 400 aa30.26■■■□□ 2.43
SNRPA1-215ENST00000561187 C2orf71A6NGG8 1288 aa30.25■■■□□ 2.43
SNRPA1-215ENST00000561187 YWHABP31946 246 aaKnown RBP30.25■■■□□ 2.43
SNRPA1-215ENST00000561187 KRT2P35908 639 aa30.25■■■□□ 2.43
SNRPA1-215ENST00000561187 RNASELQ05823 741 aaKnown RBP30.25■■■□□ 2.43
SNRPA1-215ENST00000561187 CBX2Q14781 532 aaPredicted RBP30.25■■■□□ 2.43
SNRPA1-215ENST00000561187 EMC2Q15006 297 aa30.25■■■□□ 2.43
SNRPA1-215ENST00000561187 GLB1LQ6UWU2 654 aa30.25■■■□□ 2.43
SNRPA1-215ENST00000561187 BCL7CQ8WUZ0 217 aaPredicted RBP30.25■■■□□ 2.43
SNRPA1-215ENST00000561187 PRPF31Q8WWY3 499 aaKnown RBP30.25■■■□□ 2.43
SNRPA1-215ENST00000561187 MINDY3Q9H8M7 445 aa30.25■■■□□ 2.43
SNRPA1-215ENST00000561187 HCFC2Q9Y5Z7 792 aa30.25■■■□□ 2.43
SNRPA1-215ENST00000561187 ARID2Q68CP9 1835 aa30.24■■■□□ 2.43
SNRPA1-215ENST00000561187 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP30.24■■■□□ 2.43
SNRPA1-215ENST00000561187 DKC1O60832 514 aaKnown RBP eCLIP30.24■■■□□ 2.43
SNRPA1-215ENST00000561187 FDPSP14324 419 aaKnown RBP30.24■■■□□ 2.43
SNRPA1-215ENST00000561187 EPHA7Q15375 998 aa30.24■■■□□ 2.43
SNRPA1-215ENST00000561187 ME3Q16798 604 aa30.24■■■□□ 2.43
SNRPA1-215ENST00000561187 XKR9Q5GH70 373 aa30.24■■■□□ 2.43
SNRPA1-215ENST00000561187 VPS52Q8N1B4 723 aa30.24■■■□□ 2.43
SNRPA1-215ENST00000561187 PSPC1Q8WXF1 523 aaKnown RBP30.24■■■□□ 2.43
SNRPA1-215ENST00000561187 EDAQ92838 391 aa30.24■■■□□ 2.43
SNRPA1-215ENST00000561187 S1PR5Q9H228 398 aa30.24■■■□□ 2.43
SNRPA1-215ENST00000561187 NRDE2Q9H7Z3 1164 aa30.24■■■□□ 2.43
SNRPA1-215ENST00000561187 TSHZ2Q9NRE2 1034 aa30.24■■■□□ 2.43
SNRPA1-215ENST00000561187 AGPAT5Q9NUQ2 364 aa30.24■■■□□ 2.43
SNRPA1-215ENST00000561187 ZNF318Q5VUA4 2279 aa30.23■■■□□ 2.43
SNRPA1-215ENST00000561187 B4GALT3O60512 393 aa30.23■■■□□ 2.43
SNRPA1-215ENST00000561187 HOXD11P31277 338 aaPredicted RBP30.23■■■□□ 2.43
SNRPA1-215ENST00000561187 LAMTOR4Q0VGL1 99 aa30.23■■■□□ 2.43
SNRPA1-215ENST00000561187 NOMO2Q5JPE7 1267 aa30.23■■■□□ 2.43
SNRPA1-215ENST00000561187 WASF1Q92558 559 aa30.23■■■□□ 2.43
SNRPA1-215ENST00000561187 DHX33Q9H6R0 707 aaKnown RBP30.23■■■□□ 2.43
SNRPA1-215ENST00000561187 DNAJB4Q9UDY4 337 aa30.23■■■□□ 2.43
SNRPA1-215ENST00000561187 PCDHB2Q9Y5E7 798 aa30.23■■■□□ 2.43
SNRPA1-215ENST00000561187 CLASP2O75122 1294 aaKnown RBP30.22■■■□□ 2.43
SNRPA1-215ENST00000561187 WEE2P0C1S8 567 aa30.22■■■□□ 2.43
SNRPA1-215ENST00000561187 RAB27AP51159 221 aa30.22■■■□□ 2.43
SNRPA1-215ENST00000561187 SPIRE1Q08AE8 756 aa30.22■■■□□ 2.43
SNRPA1-215ENST00000561187 ANKRD1Q15327 319 aa30.22■■■□□ 2.43
SNRPA1-215ENST00000561187 TMEM184AQ6ZMB5 413 aa30.22■■■□□ 2.43
SNRPA1-215ENST00000561187 TPH2Q8IWU9 490 aa30.22■■■□□ 2.43
SNRPA1-215ENST00000561187 MRPL43Q8N983 215 aaKnown RBP30.22■■■□□ 2.43
SNRPA1-215ENST00000561187 BRMS1Q9HCU9 246 aa30.22■■■□□ 2.43
SNRPA1-215ENST00000561187 TBX3O15119 743 aa30.21■■■□□ 2.43
SNRPA1-215ENST00000561187 JAK2O60674 1132 aa30.21■■■□□ 2.43
SNRPA1-215ENST00000561187 OFD1O75665 1012 aa30.21■■■□□ 2.43
SNRPA1-215ENST00000561187 CXCL14O95715 111 aa30.21■■■□□ 2.43
SNRPA1-215ENST00000561187 SKIP12755 728 aa30.21■■■□□ 2.43
SNRPA1-215ENST00000561187 RFC5P40937 340 aa30.21■■■□□ 2.43
SNRPA1-215ENST00000561187 C4orf19Q8IY42 314 aa30.21■■■□□ 2.43
SNRPA1-215ENST00000561187 RNF149Q8NC42 400 aa30.21■■■□□ 2.43
SNRPA1-215ENST00000561187 CASP10Q92851 521 aa30.21■■■□□ 2.43
SNRPA1-215ENST00000561187 GTF3C6Q969F1 213 aa30.21■■■□□ 2.43
SNRPA1-215ENST00000561187 FBXL18Q96ME1 805 aa30.21■■■□□ 2.43
SNRPA1-215ENST00000561187 NAP1L4Q99733 375 aaKnown RBP30.21■■■□□ 2.43
SNRPA1-215ENST00000561187 TRAIPQ9BWF2 469 aa30.21■■■□□ 2.43
SNRPA1-215ENST00000561187 ZBP1Q9H171 429 aa30.21■■■□□ 2.43
SNRPA1-215ENST00000561187 TMEM221A6NGB7 291 aa30.2■■■□□ 2.43
SNRPA1-215ENST00000561187 M0R296 226 aa30.2■■■□□ 2.43
SNRPA1-215ENST00000561187 WNT7AO00755 349 aa30.2■■■□□ 2.43
SNRPA1-215ENST00000561187 BAG4O95429 457 aaKnown RBP30.2■■■□□ 2.43
SNRPA1-215ENST00000561187 SLC11A1P49279 550 aa30.2■■■□□ 2.43
SNRPA1-215ENST00000561187 AFF1P51825 1210 aaKnown RBP30.2■■■□□ 2.43
SNRPA1-215ENST00000561187 ANAPC15P60006 121 aa30.2■■■□□ 2.43
SNRPA1-215ENST00000561187 ZXDAP98168 799 aa30.2■■■□□ 2.43
SNRPA1-215ENST00000561187 ZNF280BQ86YH2 543 aa30.2■■■□□ 2.43
SNRPA1-215ENST00000561187 TMEM87AQ8NBN3 555 aa30.2■■■□□ 2.43
SNRPA1-215ENST00000561187 TNFRSF25Q93038 417 aa30.2■■■□□ 2.43
SNRPA1-215ENST00000561187 ZSWIM4Q9H7M6 989 aa30.2■■■□□ 2.43
SNRPA1-215ENST00000561187 SSBP05455 408 aaKnown RBP eCLIP30.19■■■□□ 2.42
SNRPA1-215ENST00000561187 GALTP07902 379 aa30.19■■■□□ 2.42
SNRPA1-215ENST00000561187 KANK3Q6NY19 840 aa30.19■■■□□ 2.42
SNRPA1-215ENST00000561187 AGMOQ6ZNB7 445 aa30.19■■■□□ 2.42
SNRPA1-215ENST00000561187 TRIM67Q6ZTA4 783 aa30.19■■■□□ 2.42
SNRPA1-215ENST00000561187 SLFN12Q8IYM2 578 aa30.19■■■□□ 2.42
SNRPA1-215ENST00000561187 C12orf76Q8N812 135 aaPredicted RBP30.19■■■□□ 2.42
SNRPA1-215ENST00000561187 IGSF21Q96ID5 467 aa30.19■■■□□ 2.42
SNRPA1-215ENST00000561187 MTRQ99707 1265 aa30.19■■■□□ 2.42
SNRPA1-215ENST00000561187 CALCRLQ16602 461 aa30.18■■■□□ 2.42
SNRPA1-215ENST00000561187 RARS2Q5T160 578 aaKnown RBP30.18■■■□□ 2.42
SNRPA1-215ENST00000561187 OTUD6AQ7L8S5 288 aa30.18■■■□□ 2.42
SNRPA1-215ENST00000561187 SRGAP1Q7Z6B7 1085 aa30.18■■■□□ 2.42
SNRPA1-215ENST00000561187 ZBTB33Q86T24 672 aa30.18■■■□□ 2.42
SNRPA1-215ENST00000561187 FERMT3Q86UX7 667 aa30.18■■■□□ 2.42
SNRPA1-215ENST00000561187 NSUN7Q8NE18 718 aaKnown RBP30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms