RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 MEIS2O14770 477 aa11.73□□□□□ -0.53
APH1B-208ENST00000560353 CYTH3O43739 400 aa11.73□□□□□ -0.53
APH1B-208ENST00000560353 GPR32O75388 356 aa11.73□□□□□ -0.53
APH1B-208ENST00000560353 RETP07949 1114 aa11.73□□□□□ -0.53
APH1B-208ENST00000560353 COL1A2P08123 1366 aa11.73□□□□□ -0.53
APH1B-208ENST00000560353 NRLP54845 237 aa11.73□□□□□ -0.53
APH1B-208ENST00000560353 GPC5P78333 572 aa11.73□□□□□ -0.53
APH1B-208ENST00000560353 SLC44A4Q53GD3 710 aa11.73□□□□□ -0.53
APH1B-208ENST00000560353 ZBTB41Q5SVQ8 909 aa11.73□□□□□ -0.53
APH1B-208ENST00000560353 N4BP2L1Q5TBK1 243 aaPredicted RBP11.73□□□□□ -0.53
APH1B-208ENST00000560353 RSPO2Q6UXX9 243 aaPredicted RBP11.73□□□□□ -0.53
APH1B-208ENST00000560353 ZNF598Q86UK7 904 aaKnown RBP11.73□□□□□ -0.53
APH1B-208ENST00000560353 CELF5Q8N6W0 485 aaKnown RBP11.73□□□□□ -0.53
APH1B-208ENST00000560353 SMG7Q92540 1137 aaKnown RBP11.73□□□□□ -0.53
APH1B-208ENST00000560353 PPP1R16BQ96T49 567 aa11.73□□□□□ -0.53
APH1B-208ENST00000560353 NELL2Q99435 816 aa11.73□□□□□ -0.53
APH1B-208ENST00000560353 SDF4Q9BRK5 362 aa11.73□□□□□ -0.53
APH1B-208ENST00000560353 KRT23Q9C075 422 aa11.73□□□□□ -0.53
APH1B-208ENST00000560353 MRPL17Q9NRX2 175 aaKnown RBP11.73□□□□□ -0.53
APH1B-208ENST00000560353 MTF2Q9Y483 593 aaPredicted RBP11.73□□□□□ -0.53
APH1B-208ENST00000560353 PCDHGA4Q9Y5G9 962 aa11.73□□□□□ -0.53
APH1B-208ENST00000560353 ZFP37Q9Y6Q3 630 aaPredicted RBP11.73□□□□□ -0.53
APH1B-208ENST00000560353 NUMBLQ9Y6R0 609 aa11.73□□□□□ -0.53
APH1B-208ENST00000560353 FLNBO75369 2602 aaKnown RBP11.73□□□□□ -0.53
APH1B-208ENST00000560353 NCAM2O15394 837 aa11.72□□□□□ -0.53
APH1B-208ENST00000560353 LILRB3O75022 631 aa11.72□□□□□ -0.53
APH1B-208ENST00000560353 VTNP04004 478 aa11.72□□□□□ -0.53
APH1B-208ENST00000560353 GALTP07902 379 aa11.72□□□□□ -0.53
APH1B-208ENST00000560353 EIF4BP23588 611 aaKnown RBP11.72□□□□□ -0.53
APH1B-208ENST00000560353 NMIQ13287 307 aaPredicted RBP11.72□□□□□ -0.53
APH1B-208ENST00000560353 GRM4Q14833 912 aa11.72□□□□□ -0.53
APH1B-208ENST00000560353 MLF2Q15773 248 aaPredicted RBP11.72□□□□□ -0.53
APH1B-208ENST00000560353 CSRP2Q16527 193 aa11.72□□□□□ -0.53
APH1B-208ENST00000560353 IL31Q6EBC2 164 aa11.72□□□□□ -0.53
APH1B-208ENST00000560353 METTL13Q8N6R0 699 aa11.72□□□□□ -0.53
APH1B-208ENST00000560353 BCL7CQ8WUZ0 217 aaPredicted RBP11.72□□□□□ -0.53
APH1B-208ENST00000560353 CLDN23Q96B33 292 aa11.72□□□□□ -0.53
APH1B-208ENST00000560353 CNNM2Q9H8M5 875 aa11.72□□□□□ -0.53
APH1B-208ENST00000560353 PIDD1Q9HB75 910 aa11.72□□□□□ -0.53
APH1B-208ENST00000560353 SEMA4GQ9NTN9 838 aa11.72□□□□□ -0.53
APH1B-208ENST00000560353 DACT1Q9NYF0 836 aa11.72□□□□□ -0.53
APH1B-208ENST00000560353 NFASCO94856 1347 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 CCER2I3L3R5 266 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 BACH1O14867 736 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 INPPL1O15357 1258 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 ATG7O95352 703 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 PAPLNO95428 1278 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 ADH1AP07327 375 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 RPS9P46781 194 aaKnown RBP11.71□□□□□ -0.53
APH1B-208ENST00000560353 PFKPQ01813 784 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 RNASELQ05823 741 aaKnown RBP11.71□□□□□ -0.53
APH1B-208ENST00000560353 SEC23AQ15436 765 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 FAM160B1Q5W0V3 765 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 TSSK4Q6SA08 328 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 GLB1LQ6UWU2 654 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 PRR23CQ6ZRP0 262 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 HDAC7Q8WUI4 952 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 PTCD2Q8WV60 388 aaKnown RBP11.71□□□□□ -0.53
APH1B-208ENST00000560353 PHKBQ93100 1093 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 HS3ST6Q96QI5 342 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 MYL10Q9BUA6 226 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 VN1R3Q9BXE9 311 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 LTB4R2Q9NPC1 389 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 PRMT8Q9NR22 394 aaPredicted RBP11.71□□□□□ -0.53
APH1B-208ENST00000560353 KCNH7Q9NS40 1196 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 ZMIZ1Q9ULJ6 1067 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 SSX2IPQ9Y2D8 614 aa11.71□□□□□ -0.53
APH1B-208ENST00000560353 CNOT1A5YKK6 2376 aaKnown RBP11.7□□□□□ -0.54
APH1B-208ENST00000560353 IGKV6D-21A0A0A0MT36 114 aa11.7□□□□□ -0.54
APH1B-208ENST00000560353 ZBTB42B2RXF5 422 aa11.7□□□□□ -0.54
APH1B-208ENST00000560353 C22orf31O95567 290 aa11.7□□□□□ -0.54
APH1B-208ENST00000560353 GLUD1P00367 558 aa11.7□□□□□ -0.54
APH1B-208ENST00000560353 SSBP05455 408 aaKnown RBP eCLIP11.7□□□□□ -0.54
APH1B-208ENST00000560353 NLRP11P59045 1033 aaKnown RBP11.7□□□□□ -0.54
APH1B-208ENST00000560353 PPP2R5DQ14738 602 aa11.7□□□□□ -0.54
APH1B-208ENST00000560353 LPAL2Q16609 132 aa11.7□□□□□ -0.54
APH1B-208ENST00000560353 GET4Q7L5D6 327 aaPredicted RBP11.7□□□□□ -0.54
APH1B-208ENST00000560353 KDF1Q8NAX2 398 aaPredicted RBP11.7□□□□□ -0.54
APH1B-208ENST00000560353 PIBF1Q8WXW3 757 aa11.7□□□□□ -0.54
APH1B-208ENST00000560353 ZNF707Q96C28 371 aaPredicted RBP11.7□□□□□ -0.54
APH1B-208ENST00000560353 ADAMTS10Q9H324 1103 aa11.7□□□□□ -0.54
APH1B-208ENST00000560353 NRDE2Q9H7Z3 1164 aa11.7□□□□□ -0.54
APH1B-208ENST00000560353 PSTPIP2Q9H939 334 aa11.7□□□□□ -0.54
APH1B-208ENST00000560353 TBC1D13Q9NVG8 400 aa11.7□□□□□ -0.54
APH1B-208ENST00000560353 ITPR1Q14643 2758 aa11.69□□□□□ -0.54
APH1B-208ENST00000560353 C2orf16Q68DN1 1984 aa11.69□□□□□ -0.54
APH1B-208ENST00000560353 SPDYE3A6NKU9 549 aa11.69□□□□□ -0.54
APH1B-208ENST00000560353 RFPL2O75678 378 aa11.69□□□□□ -0.54
APH1B-208ENST00000560353 C1RP00736 705 aa11.69□□□□□ -0.54
APH1B-208ENST00000560353 SKIP12755 728 aa11.69□□□□□ -0.54
APH1B-208ENST00000560353 SLC11A1P49279 550 aa11.69□□□□□ -0.54
APH1B-208ENST00000560353 AK2P54819 239 aa11.69□□□□□ -0.54
APH1B-208ENST00000560353 IMMTQ16891 758 aaKnown RBP11.69□□□□□ -0.54
APH1B-208ENST00000560353 NOMO2Q5JPE7 1267 aa11.69□□□□□ -0.54
APH1B-208ENST00000560353 PDXDC2PQ6P474 469 aa11.69□□□□□ -0.54
APH1B-208ENST00000560353 RRP36Q96EU6 259 aaKnown RBP11.69□□□□□ -0.54
APH1B-208ENST00000560353 RPS6KC1Q96S38 1066 aa11.69□□□□□ -0.54
APH1B-208ENST00000560353 MAP7D2Q96T17 732 aa11.69□□□□□ -0.54
APH1B-208ENST00000560353 RPP25Q9BUL9 199 aaKnown RBP11.69□□□□□ -0.54
APH1B-208ENST00000560353 TRAIPQ9BWF2 469 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms