RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 TWF2Q6IBS0 349 aaKnown RBP9.47□□□□□ -0.89
USP3-217ENST00000560070 DYMQ7RTS9 669 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 NPAS4Q8IUM7 802 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 ZNF710Q8N1W2 664 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 FIBCD1Q8N539 461 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 PPM1EQ8WY54 764 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 RAD54LQ92698 747 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 STAMQ92783 540 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 LPPQ93052 612 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 CDX2Q99626 313 aaPredicted RBP9.47□□□□□ -0.89
USP3-217ENST00000560070 GDPD2Q9HCC8 539 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 RNF19AQ9NV58 838 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 CCDC39Q9UFE4 941 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 CFAP45Q9UL16 551 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 PCDHA7Q9UN72 937 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 LINC01553A4QN01 128 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 SLC16A4O15374 487 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 CUTAO60888 179 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 DGKIO75912 1065 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 CSPG5O95196 566 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 YEATS4O95619 227 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 HOXA11P31270 313 aaPredicted RBP9.46□□□□□ -0.9
USP3-217ENST00000560070 TXLNAP40222 546 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 FAM189BP81408 668 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 MBTD1Q05BQ5 628 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 BTG3Q14201 252 aaPredicted RBP9.46□□□□□ -0.9
USP3-217ENST00000560070 SHC4Q6S5L8 630 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 ECHDC2Q86YB7 292 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 ZBTB8OSQ8IWT0 167 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 DAW1Q8N136 415 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 KIFAP3Q92845 792 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 SPATA32Q96LK8 384 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 C17orf80Q9BSJ5 609 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 APOL6Q9BWW8 343 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 EIF2AQ9BY44 585 aaKnown RBP9.46□□□□□ -0.9
USP3-217ENST00000560070 CCSER1Q9C0I3 900 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 CHST12Q9NRB3 414 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 C1orf112Q9NSG2 853 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 BLOC1S4Q9NUP1 217 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 RCOR1Q9UKL0 485 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 PDE4DIPQ5VU43 2346 aa9.46□□□□□ -0.9
USP3-217ENST00000560070 MYH7BA7E2Y1 1941 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 A0A087X0B3 334 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 EPOPA6NHQ4 379 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 TTLL13PA6NNM8 815 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 K7ERI5 159 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 TSPAN1O60635 241 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 PPP6R2O75170 966 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 NPTXRO95502 500 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 CD44P16070 742 aaKnown RBP9.45□□□□□ -0.9
USP3-217ENST00000560070 ANP32AP39687 249 aaKnown RBP9.45□□□□□ -0.9
USP3-217ENST00000560070 STAT6P42226 847 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 NAMPTP43490 491 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 NPTX2P47972 431 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 HTRA4P83105 476 aaPredicted RBP9.45□□□□□ -0.9
USP3-217ENST00000560070 MAPK7Q13164 816 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 GIT2Q14161 759 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 CCDC85BQ15834 202 aaPredicted RBP9.45□□□□□ -0.9
USP3-217ENST00000560070 UBXN11Q5T124 520 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 ATL3Q6DD88 541 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 GPR153Q6NV75 609 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 SV2BQ7L1I2 683 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 MICALL1Q8N3F8 863 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 MYCT1Q8N699 235 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 HELQQ8TDG4 1101 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 KCNG4Q8TDN1 519 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 LEO1Q8WVC0 666 aaPredicted RBP9.45□□□□□ -0.9
USP3-217ENST00000560070 LARP4BQ92615 738 aaKnown RBP9.45□□□□□ -0.9
USP3-217ENST00000560070 DHX58Q96C10 678 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 GUCD1Q96NT3 240 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 DCBLD2Q96PD2 775 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 TGS1Q96RS0 853 aaKnown RBP9.45□□□□□ -0.9
USP3-217ENST00000560070 KMT5AQ9NQR1 393 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 DACT1Q9NYF0 836 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 HCSTQ9UBK5 93 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 INPP5FQ9Y2H2 1132 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 HES2Q9Y543 173 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 PCDHB2Q9Y5E7 798 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 DOCK5Q9H7D0 1870 aa9.45□□□□□ -0.9
USP3-217ENST00000560070 A0A0U1RQF3 1178 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 MYMKA6NI61 221 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 MEIS3P2A8K0S8 358 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 TULP1O00294 542 aaPredicted RBP9.44□□□□□ -0.9
USP3-217ENST00000560070 POLR2DO15514 142 aaKnown RBP9.44□□□□□ -0.9
USP3-217ENST00000560070 SLC26A4O43511 780 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 FAM13AO94988 1023 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 PRKCBP05771 671 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 PLS3P13797 630 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 ARF4P18085 180 aaPredicted RBP9.44□□□□□ -0.9
USP3-217ENST00000560070 GUCY2CP25092 1073 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 CTNNB1P35222 781 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 KRT85P78386 507 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 NUCB2P80303 420 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 POU5F1BQ06416 359 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 PRPF4BQ13523 1007 aaKnown RBP9.44□□□□□ -0.9
USP3-217ENST00000560070 ADGRE1Q14246 886 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 PPP2R5AQ15172 486 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 MAPK6Q16659 721 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 AMHR2Q16671 573 aa9.44□□□□□ -0.9
USP3-217ENST00000560070 AXDND1Q5T1B0 1012 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms