RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 HOXA11P31270 313 aaPredicted RBP19.58■□□□□ 0.72
SMAD3-210ENST00000559092 TOB1P50616 345 aaPredicted RBP19.58■□□□□ 0.72
SMAD3-210ENST00000559092 PDE12Q6L8Q7 609 aaKnown RBP19.58■□□□□ 0.72
SMAD3-210ENST00000559092 THNSL1Q8IYQ7 743 aa19.58■□□□□ 0.72
SMAD3-210ENST00000559092 PGBD4Q96DM1 585 aa19.58■□□□□ 0.72
SMAD3-210ENST00000559092 NFKBIZQ9BYH8 718 aa19.58■□□□□ 0.72
SMAD3-210ENST00000559092 MINDY3Q9H8M7 445 aa19.58■□□□□ 0.72
SMAD3-210ENST00000559092 BMP2KQ9NSY1 1161 aaPredicted RBP19.58■□□□□ 0.72
SMAD3-210ENST00000559092 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.58■□□□□ 0.72
SMAD3-210ENST00000559092 MED24O75448 989 aa19.57■□□□□ 0.72
SMAD3-210ENST00000559092 CD2BP2O95400 341 aaKnown RBP19.57■□□□□ 0.72
SMAD3-210ENST00000559092 AXLP30530 894 aa19.57■□□□□ 0.72
SMAD3-210ENST00000559092 PPM1AP35813 382 aa19.57■□□□□ 0.72
SMAD3-210ENST00000559092 NCBP1Q09161 790 aaKnown RBP19.57■□□□□ 0.72
SMAD3-210ENST00000559092 HYAL1Q12794 435 aa19.57■□□□□ 0.72
SMAD3-210ENST00000559092 HAUS3Q68CZ6 603 aa19.57■□□□□ 0.72
SMAD3-210ENST00000559092 MCPH1Q8NEM0 835 aa19.57■□□□□ 0.72
SMAD3-210ENST00000559092 ZNF558Q96NG5 402 aa19.57■□□□□ 0.72
SMAD3-210ENST00000559092 RAB34Q9BZG1 259 aa19.57■□□□□ 0.72
SMAD3-210ENST00000559092 PUF60Q9UHX1 559 aaKnown RBP19.57■□□□□ 0.72
SMAD3-210ENST00000559092 PCDHB2Q9Y5E7 798 aa19.57■□□□□ 0.72
SMAD3-210ENST00000559092 RALGAPA2Q2PPJ7 1873 aa19.56■□□□□ 0.72
SMAD3-210ENST00000559092 GJB2P29033 226 aa19.56■□□□□ 0.72
SMAD3-210ENST00000559092 KRT17Q04695 432 aa19.56■□□□□ 0.72
SMAD3-210ENST00000559092 PTGDRQ13258 359 aa19.56■□□□□ 0.72
SMAD3-210ENST00000559092 RILPL1Q5EBL4 403 aa19.56■□□□□ 0.72
SMAD3-210ENST00000559092 KCNT2Q6UVM3 1135 aa19.56■□□□□ 0.72
SMAD3-210ENST00000559092 GLB1LQ6UWU2 654 aa19.56■□□□□ 0.72
SMAD3-210ENST00000559092 MRPL10Q7Z7H8 261 aaKnown RBP19.56■□□□□ 0.72
SMAD3-210ENST00000559092 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.56■□□□□ 0.72
SMAD3-210ENST00000559092 HELQQ8TDG4 1101 aa19.56■□□□□ 0.72
SMAD3-210ENST00000559092 CCDC51Q96ER9 411 aa19.56■□□□□ 0.72
SMAD3-210ENST00000559092 LRWD1Q9UFC0 647 aa19.56■□□□□ 0.72
SMAD3-210ENST00000559092 WDR81Q562E7 1941 aa19.56■□□□□ 0.72
SMAD3-210ENST00000559092 A0A087WWV3 80 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 FSD2A1L4K1 749 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 BDP1A6H8Y1 2624 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 H3BQV1 296 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 ERLIN2O94905 339 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 GLRA2P23416 452 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 PRPHP41219 470 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 MCTP1Q6DN14 999 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 IGSF22Q8N9C0 903 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 CNNM3Q8NE01 707 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 ASAP3Q8TDY4 903 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 MRPS27Q92552 414 aaKnown RBP19.55■□□□□ 0.72
SMAD3-210ENST00000559092 TLR9Q9NR96 1032 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 CLDND1Q9NY35 253 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 SPG21Q9NZD8 308 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 HCSTQ9UBK5 93 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 SMC3Q9UQE7 1217 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 FAM50BQ9Y247 325 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 PCDHB6Q9Y5E3 794 aa19.55■□□□□ 0.72
SMAD3-210ENST00000559092 GRXCR2A6NFK2 248 aa19.54■□□□□ 0.72
SMAD3-210ENST00000559092 USO1O60763 962 aaKnown RBP19.54■□□□□ 0.72
SMAD3-210ENST00000559092 OFD1O75665 1012 aa19.54■□□□□ 0.72
SMAD3-210ENST00000559092 IRS1P35568 1242 aa19.54■□□□□ 0.72
SMAD3-210ENST00000559092 LTBRP36941 435 aa19.54■□□□□ 0.72
SMAD3-210ENST00000559092 ALDH7A1P49419 539 aaKnown RBP19.54■□□□□ 0.72
SMAD3-210ENST00000559092 ADAM15Q13444 863 aa19.54■□□□□ 0.72
SMAD3-210ENST00000559092 CAPSQ13938 189 aa19.54■□□□□ 0.72
SMAD3-210ENST00000559092 NBR1Q14596 966 aa19.54■□□□□ 0.72
SMAD3-210ENST00000559092 NOMO2Q5JPE7 1267 aa19.54■□□□□ 0.72
SMAD3-210ENST00000559092 POTEGQ6S5H5 508 aa19.54■□□□□ 0.72
SMAD3-210ENST00000559092 EFHBQ8N7U6 833 aa19.54■□□□□ 0.72
SMAD3-210ENST00000559092 MICAL1Q8TDZ2 1067 aa19.54■□□□□ 0.72
SMAD3-210ENST00000559092 POLR3FQ9H1D9 316 aaPredicted RBP19.54■□□□□ 0.72
SMAD3-210ENST00000559092 NGRNQ9NPE2 291 aaKnown RBP19.54■□□□□ 0.72
SMAD3-210ENST00000559092 UBN1Q9NPG3 1134 aa19.54■□□□□ 0.72
SMAD3-210ENST00000559092 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.54■□□□□ 0.72
SMAD3-210ENST00000559092 LOXHD1Q8IVV2 1947 aa19.54■□□□□ 0.72
SMAD3-210ENST00000559092 CNTNAP2Q9UHC6 1331 aa19.53■□□□□ 0.72
SMAD3-210ENST00000559092 ARHGEF35A5YM69 484 aa19.53■□□□□ 0.72
SMAD3-210ENST00000559092 H3BQ06 376 aaPredicted RBP19.53■□□□□ 0.72
SMAD3-210ENST00000559092 INO80B-WBP1J3KQ70 363 aa19.53■□□□□ 0.72
SMAD3-210ENST00000559092 TSPAN1O60635 241 aa19.53■□□□□ 0.72
SMAD3-210ENST00000559092 CYP11B2P19099 503 aa19.53■□□□□ 0.72
SMAD3-210ENST00000559092 CCT6AP40227 531 aaKnown RBP19.53■□□□□ 0.72
SMAD3-210ENST00000559092 MBTD1Q05BQ5 628 aa19.53■□□□□ 0.72
SMAD3-210ENST00000559092 UBXN11Q5T124 520 aa19.53■□□□□ 0.72
SMAD3-210ENST00000559092 PTCRAQ6ISU1 281 aaPredicted RBP19.53■□□□□ 0.72
SMAD3-210ENST00000559092 NOTUMQ6P988 496 aa19.53■□□□□ 0.72
SMAD3-210ENST00000559092 PADI6Q6TGC4 694 aa19.53■□□□□ 0.72
SMAD3-210ENST00000559092 DTHD1Q6ZMT9 781 aa19.53■□□□□ 0.72
SMAD3-210ENST00000559092 EP400NLQ6ZTU2 488 aa19.53■□□□□ 0.72
SMAD3-210ENST00000559092 LPPQ93052 612 aa19.53■□□□□ 0.72
SMAD3-210ENST00000559092 NECAB3Q96P71 396 aaPredicted RBP19.53■□□□□ 0.72
SMAD3-210ENST00000559092 CDCA3Q99618 268 aaPredicted RBP19.53■□□□□ 0.72
SMAD3-210ENST00000559092 IGFLR1Q9H665 355 aa19.53■□□□□ 0.72
SMAD3-210ENST00000559092 NCOR1O75376 2440 aa19.52■□□□□ 0.72
SMAD3-210ENST00000559092 FSCN2O14926 492 aa19.52■□□□□ 0.72
SMAD3-210ENST00000559092 NCLP19338 710 aaKnown RBP19.52■□□□□ 0.72
SMAD3-210ENST00000559092 ERVFC1P60507 584 aa19.52■□□□□ 0.72
SMAD3-210ENST00000559092 SLC39A11Q8N1S5 342 aa19.52■□□□□ 0.72
SMAD3-210ENST00000559092 BACH2Q9BYV9 841 aa19.52■□□□□ 0.72
SMAD3-210ENST00000559092 TLE6Q9H808 572 aa19.52■□□□□ 0.72
SMAD3-210ENST00000559092 KANSL3Q9P2N6 904 aa19.52■□□□□ 0.72
SMAD3-210ENST00000559092 DAXXQ9UER7 740 aaPredicted RBP19.52■□□□□ 0.72
SMAD3-210ENST00000559092 BRWD1Q9NSI6 2320 aa19.51■□□□□ 0.71
SMAD3-210ENST00000559092 GTF2F1P35269 517 aaKnown RBP eCLIP19.51■□□□□ 0.711e-8■■■■■ 46.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms