RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 NLRP11P59045 1033 aaKnown RBP13.54□□□□□ -0.24
SMAD3-206ENST00000558739 MTAPQ13126 283 aa13.54□□□□□ -0.24
SMAD3-206ENST00000558739 PRR23BQ6ZRT6 265 aa13.54□□□□□ -0.24
SMAD3-206ENST00000558739 TAS1R1Q7RTX1 841 aa13.54□□□□□ -0.24
SMAD3-206ENST00000558739 ZNF280BQ86YH2 543 aa13.54□□□□□ -0.24
SMAD3-206ENST00000558739 LRRC71Q8N4P6 559 aa13.54□□□□□ -0.24
SMAD3-206ENST00000558739 CUL5Q93034 780 aa13.54□□□□□ -0.24
SMAD3-206ENST00000558739 NXPE3Q969Y0 559 aa13.54□□□□□ -0.24
SMAD3-206ENST00000558739 WDR81Q562E7 1941 aa13.54□□□□□ -0.24
SMAD3-206ENST00000558739 CFAP46Q8IYW2 2715 aa13.54□□□□□ -0.24
SMAD3-206ENST00000558739 IGKV6D-21A0A0A0MT36 114 aa13.53□□□□□ -0.24
SMAD3-206ENST00000558739 SHISA7A6NL88 538 aa13.53□□□□□ -0.24
SMAD3-206ENST00000558739 BACH1O14867 736 aa13.53□□□□□ -0.24
SMAD3-206ENST00000558739 HBP1O60381 514 aa13.53□□□□□ -0.24
SMAD3-206ENST00000558739 HNRNPUQ00839 825 aaKnown RBP eCLIP13.53□□□□□ -0.24
SMAD3-206ENST00000558739 SRSF5Q13243 272 aaKnown RBP13.53□□□□□ -0.24
SMAD3-206ENST00000558739 FZD5Q13467 585 aa13.53□□□□□ -0.24
SMAD3-206ENST00000558739 LAIR1Q6GTX8 287 aa13.53□□□□□ -0.24
SMAD3-206ENST00000558739 SHDQ96IW2 340 aa13.53□□□□□ -0.24
SMAD3-206ENST00000558739 PGBD1Q96JS3 809 aa13.53□□□□□ -0.24
SMAD3-206ENST00000558739 COL1A2P08123 1366 aa13.53□□□□□ -0.24
SMAD3-206ENST00000558739 CACNA1EQ15878 2313 aa13.53□□□□□ -0.24
SMAD3-206ENST00000558739 ATG7O95352 703 aa13.52□□□□□ -0.25
SMAD3-206ENST00000558739 GLUD1P00367 558 aa13.52□□□□□ -0.25
SMAD3-206ENST00000558739 EIF4BP23588 611 aaKnown RBP13.52□□□□□ -0.25
SMAD3-206ENST00000558739 AK2P54819 239 aa13.52□□□□□ -0.25
SMAD3-206ENST00000558739 NTHL1P78549 312 aa13.52□□□□□ -0.25
SMAD3-206ENST00000558739 TROAPQ12815 778 aa13.52□□□□□ -0.25
SMAD3-206ENST00000558739 TRAF1Q13077 416 aa13.52□□□□□ -0.25
SMAD3-206ENST00000558739 SLC44A4Q53GD3 710 aa13.52□□□□□ -0.25
SMAD3-206ENST00000558739 UNQ6494/PRO21346Q6UXR6 183 aa13.52□□□□□ -0.25
SMAD3-206ENST00000558739 ABHD15Q6UXT9 468 aa13.52□□□□□ -0.25
SMAD3-206ENST00000558739 FAM43BQ6ZT52 329 aaPredicted RBP13.52□□□□□ -0.25
SMAD3-206ENST00000558739 CLDN23Q96B33 292 aa13.52□□□□□ -0.25
SMAD3-206ENST00000558739 SDF4Q9BRK5 362 aa13.52□□□□□ -0.25
SMAD3-206ENST00000558739 RXFP3Q9NSD7 469 aa13.52□□□□□ -0.25
SMAD3-206ENST00000558739 AKT3Q9Y243 479 aa13.52□□□□□ -0.25
SMAD3-206ENST00000558739 GREB1Q4ZG55 1949 aa13.52□□□□□ -0.25
SMAD3-206ENST00000558739 NOTCH4Q99466 2003 aa13.52□□□□□ -0.25
SMAD3-206ENST00000558739 MYO18BQ8IUG5 2567 aa13.52□□□□□ -0.25
SMAD3-206ENST00000558739 NFASCO94856 1347 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 hCG_1642624A0A1W2PR95 340 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 F8W810 466 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 DDHD2O94830 711 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 RETP07949 1114 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 PHKA2P46019 1235 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 PDE1AP54750 535 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 RNASELQ05823 741 aaKnown RBP13.51□□□□□ -0.25
SMAD3-206ENST00000558739 NOMO2Q5JPE7 1267 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 ZNF484Q5JVG2 852 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 PDXDC2PQ6P474 469 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 TPRG1Q6ZUI0 275 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 LINC01465Q8N7H1 131 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 MAP4K1Q92918 833 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 TNPO1Q92973 898 aaKnown RBP13.51□□□□□ -0.25
SMAD3-206ENST00000558739 B3GALT6Q96L58 329 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 KXD1Q9BQD3 176 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 MYL10Q9BUA6 226 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 RHOBTB2Q9BYZ6 727 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 NT5C3AQ9H0P0 336 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 AGO4Q9HCK5 861 aaKnown RBP13.51□□□□□ -0.25
SMAD3-206ENST00000558739 MRPL17Q9NRX2 175 aaKnown RBP13.51□□□□□ -0.25
SMAD3-206ENST00000558739 MARCH5Q9NX47 278 aa13.51□□□□□ -0.25
SMAD3-206ENST00000558739 SOBPA7XYQ1 873 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 DARSP14868 501 aaKnown RBP13.5□□□□□ -0.25
SMAD3-206ENST00000558739 SPINK2P20155 84 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 SLC26A2P50443 739 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 CCDC6Q16204 474 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 CSRP2Q16527 193 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 ZBTB41Q5SVQ8 909 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 PALB2Q86YC2 1186 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 GLYCTKQ8IVS8 523 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 BORCS6Q96GS4 357 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 RPS6KC1Q96S38 1066 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 MXRA8Q9BRK3 442 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 TMEM121BQ9BXQ6 578 aaPredicted RBP13.5□□□□□ -0.25
SMAD3-206ENST00000558739 KRT23Q9C075 422 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 CHMP4BQ9H444 224 aaKnown RBP13.5□□□□□ -0.25
SMAD3-206ENST00000558739 PSTPIP2Q9H939 334 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 PIDD1Q9HB75 910 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 ZNF302Q9NR11 478 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 FAM217BQ9NTX9 383 aaPredicted RBP13.5□□□□□ -0.25
SMAD3-206ENST00000558739 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMAD3-206ENST00000558739 RAB23Q9ULC3 237 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 PCDHA6Q9UN73 950 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 PCDHB15Q9Y5E8 787 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 PCDHA8Q9Y5H6 950 aa13.5□□□□□ -0.25
SMAD3-206ENST00000558739 TM4SF5O14894 197 aa13.49□□□□□ -0.25
SMAD3-206ENST00000558739 OFD1O75665 1012 aa13.49□□□□□ -0.25
SMAD3-206ENST00000558739 PLEKHA8P1O95397 391 aa13.49□□□□□ -0.25
SMAD3-206ENST00000558739 URODP06132 367 aa13.49□□□□□ -0.25
SMAD3-206ENST00000558739 ADH1AP07327 375 aa13.49□□□□□ -0.25
SMAD3-206ENST00000558739 HOXC13P31276 330 aa13.49□□□□□ -0.25
SMAD3-206ENST00000558739 GPC3P51654 580 aa13.49□□□□□ -0.25
SMAD3-206ENST00000558739 PRKCQQ04759 706 aa13.49□□□□□ -0.25
SMAD3-206ENST00000558739 RING1Q06587 406 aa13.49□□□□□ -0.25
SMAD3-206ENST00000558739 SF3A2Q15428 464 aaKnown RBP13.49□□□□□ -0.25
SMAD3-206ENST00000558739 SWSAP1Q6NVH7 229 aa13.49□□□□□ -0.25
SMAD3-206ENST00000558739 GLB1LQ6UWU2 654 aa13.49□□□□□ -0.25
SMAD3-206ENST00000558739 CMTR1Q8N1G2 835 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms