RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 VN1R2Q8NFZ6 395 aa12.91□□□□□ -0.34
CASC4-205ENST00000558735 MRPS27Q92552 414 aaKnown RBP12.91□□□□□ -0.34
CASC4-205ENST00000558735 ATOH1Q92858 354 aaPredicted RBP12.91□□□□□ -0.34
CASC4-205ENST00000558735 TNFRSF25Q93038 417 aa12.91□□□□□ -0.34
CASC4-205ENST00000558735 TRAIPQ9BWF2 469 aa12.91□□□□□ -0.34
CASC4-205ENST00000558735 S1PR5Q9H228 398 aa12.91□□□□□ -0.34
CASC4-205ENST00000558735 IFT122Q9HBG6 1241 aa12.91□□□□□ -0.34
CASC4-205ENST00000558735 DACT1Q9NYF0 836 aa12.91□□□□□ -0.34
CASC4-205ENST00000558735 LZTS1Q9Y250 596 aa12.91□□□□□ -0.34
CASC4-205ENST00000558735 PTPRZ1P23471 2315 aaPredicted RBP12.91□□□□□ -0.34
CASC4-205ENST00000558735 RIF1Q5UIP0 2472 aaKnown RBP12.9□□□□□ -0.34
CASC4-205ENST00000558735 DMDP11532 3685 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 GALR2O43603 387 aaPredicted RBP12.9□□□□□ -0.34
CASC4-205ENST00000558735 SLITRK3O94933 977 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 SEC24BO95487 1268 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 PHKA2P46019 1235 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 SPIRE1Q08AE8 756 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 ZNF410Q86VK4 478 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 POTEDQ86YR6 584 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 C4orf19Q8IY42 314 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 ABI1Q8IZP0 508 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 HELQQ8TDG4 1101 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 PRPF31Q8WWY3 499 aaKnown RBP12.9□□□□□ -0.34
CASC4-205ENST00000558735 WASF1Q92558 559 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 RPGRIP1Q96KN7 1286 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 CEP170P1Q96L14 293 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 RIPOR3Q96MK2 946 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 ZNF558Q96NG5 402 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 NAP1L4Q99733 375 aaKnown RBP12.9□□□□□ -0.34
CASC4-205ENST00000558735 INO80BQ9C086 356 aaPredicted RBP12.9□□□□□ -0.34
CASC4-205ENST00000558735 DHX33Q9H6R0 707 aaKnown RBP12.9□□□□□ -0.34
CASC4-205ENST00000558735 FAM86C1Q9NVL1 165 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 SPG21Q9NZD8 308 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 PUF60Q9UHX1 559 aaKnown RBP12.9□□□□□ -0.34
CASC4-205ENST00000558735 KIAA1671Q9BY89 1806 aa12.9□□□□□ -0.34
CASC4-205ENST00000558735 HIDE1A8MVS5 230 aa12.89□□□□□ -0.35
CASC4-205ENST00000558735 NT5C1B-RDH14C9J2C7 533 aa12.89□□□□□ -0.35
CASC4-205ENST00000558735 MARCH6O60337 910 aa12.89□□□□□ -0.35
CASC4-205ENST00000558735 DKC1O60832 514 aaKnown RBP eCLIP12.89□□□□□ -0.35
CASC4-205ENST00000558735 ZNF623O75123 536 aa12.89□□□□□ -0.35
CASC4-205ENST00000558735 KRT2P35908 639 aa12.89□□□□□ -0.35
CASC4-205ENST00000558735 NBL1P41271 181 aa12.89□□□□□ -0.35
CASC4-205ENST00000558735 NEK4P51957 841 aa12.89□□□□□ -0.35
CASC4-205ENST00000558735 LONRF3Q496Y0 759 aa12.89□□□□□ -0.35
CASC4-205ENST00000558735 LRRC43Q8N309 656 aa12.89□□□□□ -0.35
CASC4-205ENST00000558735 NSUN7Q8NE18 718 aaKnown RBP12.89□□□□□ -0.35
CASC4-205ENST00000558735 LPPQ93052 612 aa12.89□□□□□ -0.35
CASC4-205ENST00000558735 GTF3C6Q969F1 213 aa12.89□□□□□ -0.35
CASC4-205ENST00000558735 TMEM143Q96AN5 459 aa12.89□□□□□ -0.35
CASC4-205ENST00000558735 DYDC2Q96IM9 177 aa12.89□□□□□ -0.35
CASC4-205ENST00000558735 JPH2Q9BR39 696 aaPredicted RBP12.89□□□□□ -0.35
CASC4-205ENST00000558735 CACNA1AO00555 2505 aa12.89□□□□□ -0.35
CASC4-205ENST00000558735 PLXNA3P51805 1871 aa12.89□□□□□ -0.35
CASC4-205ENST00000558735 PLXNA4Q9HCM2 1894 aa12.89□□□□□ -0.35
CASC4-205ENST00000558735 ZNF292O60281 2723 aa12.89□□□□□ -0.35
CASC4-205ENST00000558735 MEIS3P2A8K0S8 358 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 BTBD18B2RXH4 712 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 WNT7AO00755 349 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 JAK2O60674 1132 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 BAG4O95429 457 aaKnown RBP12.88□□□□□ -0.35
CASC4-205ENST00000558735 SRGAP2CP0DJJ0 459 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 HOXB8P17481 243 aaPredicted RBP12.88□□□□□ -0.35
CASC4-205ENST00000558735 SFPQP23246 707 aaKnown RBP eCLIP12.88□□□□□ -0.35
CASC4-205ENST00000558735 HOXA11P31270 313 aaPredicted RBP12.88□□□□□ -0.35
CASC4-205ENST00000558735 YWHABP31946 246 aaKnown RBP12.88□□□□□ -0.35
CASC4-205ENST00000558735 KRT17Q04695 432 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 CTTNQ14247 550 aaKnown RBP12.88□□□□□ -0.35
CASC4-205ENST00000558735 PLPP4Q5VZY2 271 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 TWF2Q6IBS0 349 aaKnown RBP12.88□□□□□ -0.35
CASC4-205ENST00000558735 NCAPH2Q6IBW4 605 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 OTUD6AQ7L8S5 288 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 CATSPER4Q7RTX7 472 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 TPH2Q8IWU9 490 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 EXOC8Q8IYI6 725 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 SLFN12Q8IYM2 578 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 UBALD2Q8IYN6 164 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 SLC39A11Q8N1S5 342 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 MRPL43Q8N983 215 aaKnown RBP12.88□□□□□ -0.35
CASC4-205ENST00000558735 SLC7A3Q8WY07 619 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 NLRP4Q96MN2 994 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 HSD17B14Q9BPX1 270 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 TCF25Q9BQ70 676 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 LXNQ9BS40 222 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 ZSWIM4Q9H7M6 989 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 MINDY3Q9H8M7 445 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 NGRNQ9NPE2 291 aaKnown RBP12.88□□□□□ -0.35
CASC4-205ENST00000558735 FAM105AQ9NUU6 356 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 PCDHA12Q9UN75 941 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 PIN4Q9Y237 131 aaKnown RBP12.88□□□□□ -0.35
CASC4-205ENST00000558735 PPME1Q9Y570 386 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 COL4A3BPQ9Y5P4 624 aa12.88□□□□□ -0.35
CASC4-205ENST00000558735 H0Y858 1186 aa12.87□□□□□ -0.35
CASC4-205ENST00000558735 OFD1O75665 1012 aa12.87□□□□□ -0.35
CASC4-205ENST00000558735 SRGAP2BP0DMP2 458 aa12.87□□□□□ -0.35
CASC4-205ENST00000558735 PPM1AP35813 382 aa12.87□□□□□ -0.35
CASC4-205ENST00000558735 ALDH7A1P49419 539 aaKnown RBP12.87□□□□□ -0.35
CASC4-205ENST00000558735 POLGP54098 1239 aaPredicted RBP12.87□□□□□ -0.35
CASC4-205ENST00000558735 BCAR1P56945 870 aa12.87□□□□□ -0.35
CASC4-205ENST00000558735 CYP4A11Q02928 519 aa12.87□□□□□ -0.35
CASC4-205ENST00000558735 LAMTOR4Q0VGL1 99 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms