RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 NLRP11P59045 1033 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 NLRP5P59047 1200 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 KANK3Q6NY19 840 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 SLC39A11Q8N1S5 342 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 MRPL43Q8N983 215 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 TMEM87AQ8NBN3 555 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 HCFC2Q9Y5Z7 792 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 C2orf71A6NGG8 1288 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 WEE2P0C1S8 567 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 TOB1P50616 345 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 KRT17Q04695 432 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 SAFBQ15424 915 aaKnown RBP eCLIP12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 SKOR2Q2VWA4 1001 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 ZNF746Q6NUN9 644 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 EFCAB12Q6NXP0 572 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 CAVIN1Q6NZI2 390 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 ZNF598Q86UK7 904 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 NOSTRINQ8IVI9 506 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 LRRC71Q8N4P6 559 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 FEZF2Q8TBJ5 459 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 CASP10Q92851 521 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 ZNF577Q9BSK1 485 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 ADAM7Q9H2U9 754 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 GABBR1Q9UBS5 961 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 CFAP45Q9UL16 551 aa12.53□□□□□ -0.4
RABGGTA-204ENST00000558376 MAGEB2O15479 319 aa12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 HOXA2O43364 376 aa12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 GALR2O43603 387 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 XBP1P17861 261 aa12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 FGFR4P22455 802 aa12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 PPM1AP35813 382 aa12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 KLHL40Q2TBA0 621 aa12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 BRAPQ7Z569 592 aa12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 LRRC43Q8N309 656 aa12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 C12orf76Q8N812 135 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 TMEM105Q8N8V8 129 aa12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 RNF169Q8NCN4 708 aa12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 ZNF396Q96N95 335 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 SCAND2PQ9GZW5 306 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 IRF2BPLQ9H1B7 796 aa12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 RCOR1Q9UKL0 485 aa12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 AKT3Q9Y243 479 aa12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 NR2E1Q9Y466 385 aa12.52□□□□□ -0.41
RABGGTA-204ENST00000558376 NT5C1B-RDH14C9J2C7 533 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 hCG_1984214I3L0E3 225 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 ZNF862O60290 1169 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 PSAPP07602 524 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 EIF4BP23588 611 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 SMC1AQ14683 1233 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 ASCL5Q7RTU5 278 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 ABI1Q8IZP0 508 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 ZNF713Q8N859 430 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 GLT8D2Q9H1C3 349 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 FOXP1Q9H334 677 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 TBC1D22BQ9NU19 505 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 SORCS3Q9UPU3 1222 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 PCDHA10Q9Y5I2 948 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 PROB1E7EW31 1015 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 WNT7AO00755 349 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 EDIL3O43854 480 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 CXCL14O95715 111 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 ASGR2P07307 311 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 ZSCAN20P17040 1043 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 MARCKSP29966 332 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 KRT2P35908 639 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 NUBP1P53384 320 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 SF3A1Q15459 793 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 RARS2Q5T160 578 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 CES5AQ6NT32 575 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 UBALD2Q8IYN6 164 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 LINC00301Q8NCQ3 95 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 HELQQ8TDG4 1101 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 TMEM63CQ9P1W3 806 aa12.51□□□□□ -0.41
RABGGTA-204ENST00000558376 GVINP1Q7Z2Y8 2422 aa12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 MYO15AQ9UKN7 3530 aa12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 A0A0U1RQF3 1178 aa12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 CSDE1O75534 798 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 DARSP14868 501 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 PTMSP20962 102 aa12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 GPC3P51654 580 aa12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 BCAR1P56945 870 aa12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 UBE2HP62256 183 aa12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 ITIH3Q06033 890 aa12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 PRR16Q569H4 304 aa12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 TMEM173Q86WV6 379 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 SMAP1Q8IYB5 467 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 AUTS2Q8WXX7 1259 aa12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 NECTIN4Q96NY8 510 aa12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 LIMD1Q9UGP4 676 aa12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 CEP131Q9UPN4 1083 aa12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 PCDHB6Q9Y5E3 794 aa12.5□□□□□ -0.41
RABGGTA-204ENST00000558376 WDR87Q6ZQQ6 2873 aa12.49□□□□□ -0.41
RABGGTA-204ENST00000558376 EOMESO95936 686 aa12.49□□□□□ -0.41
RABGGTA-204ENST00000558376 EPCAMP16422 314 aa12.49□□□□□ -0.41
RABGGTA-204ENST00000558376 LIG1P18858 919 aa12.49□□□□□ -0.41
RABGGTA-204ENST00000558376 MTHFRP42898 656 aa12.49□□□□□ -0.41
RABGGTA-204ENST00000558376 MTMR3Q13615 1198 aa12.49□□□□□ -0.41
RABGGTA-204ENST00000558376 UGCGQ16739 394 aa12.49□□□□□ -0.41
RABGGTA-204ENST00000558376 PIK3AP1Q6ZUJ8 805 aa12.49□□□□□ -0.41
RABGGTA-204ENST00000558376 SLC22A17Q8WUG5 538 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms