RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 SHHQ15465 462 aa8.79□□□□□ -1
RTF1-205ENST00000558298 LETM2Q2VYF4 491 aa8.79□□□□□ -1
RTF1-205ENST00000558298 RILPL1Q5EBL4 403 aa8.79□□□□□ -1
RTF1-205ENST00000558298 MIS18BP1Q6P0N0 1132 aa8.79□□□□□ -1
RTF1-205ENST00000558298 TAF2Q6P1X5 1199 aa8.79□□□□□ -1
RTF1-205ENST00000558298 LRRC31Q6UY01 552 aa8.79□□□□□ -1
RTF1-205ENST00000558298 FERMT3Q86UX7 667 aa8.79□□□□□ -1
RTF1-205ENST00000558298 SERINC5Q86VE9 423 aa8.79□□□□□ -1
RTF1-205ENST00000558298 MLKLQ8NB16 471 aa8.79□□□□□ -1
RTF1-205ENST00000558298 C1orf131Q8NDD1 294 aaKnown RBP8.79□□□□□ -1
RTF1-205ENST00000558298 NEK9Q8TD19 979 aa8.79□□□□□ -1
RTF1-205ENST00000558298 HAS1Q92839 578 aa8.79□□□□□ -1
RTF1-205ENST00000558298 FAM167AQ96KS9 214 aa8.79□□□□□ -1
RTF1-205ENST00000558298 TEKT3Q9BXF9 490 aa8.79□□□□□ -1
RTF1-205ENST00000558298 TRPV6Q9H1D0 765 aa8.79□□□□□ -1
RTF1-205ENST00000558298 TRMT13Q9NUP7 481 aaKnown RBP8.79□□□□□ -1
RTF1-205ENST00000558298 TCEAL9Q9UHQ7 104 aa8.79□□□□□ -1
RTF1-205ENST00000558298 TUBE1Q9UJT0 475 aa8.79□□□□□ -1
RTF1-205ENST00000558298 FAN1Q9Y2M0 1017 aa8.79□□□□□ -1
RTF1-205ENST00000558298 PCDHA10Q9Y5I2 948 aa8.79□□□□□ -1
RTF1-205ENST00000558298 COL4A6Q14031 1691 aa8.78□□□□□ -1
RTF1-205ENST00000558298 FAM237AA0A1B0GTK4 181 aa8.78□□□□□ -1
RTF1-205ENST00000558298 RRN3P2A6NIE6 340 aa8.78□□□□□ -1
RTF1-205ENST00000558298 DKC1O60832 514 aaKnown RBP eCLIP8.78□□□□□ -1
RTF1-205ENST00000558298 GAS7O60861 476 aa8.78□□□□□ -1
RTF1-205ENST00000558298 RNF40O75150 1001 aa8.78□□□□□ -1
RTF1-205ENST00000558298 LYPLA2O95372 231 aa8.78□□□□□ -1
RTF1-205ENST00000558298 PSAPP07602 524 aa8.78□□□□□ -1
RTF1-205ENST00000558298 SMIM10L2AP0DMW4 78 aa8.78□□□□□ -1
RTF1-205ENST00000558298 SMIM10L2BP0DMW5 78 aa8.78□□□□□ -1
RTF1-205ENST00000558298 EPB41P11171 864 aaKnown RBP8.78□□□□□ -1
RTF1-205ENST00000558298 MUTP22033 750 aa8.78□□□□□ -1
RTF1-205ENST00000558298 PRPHP41219 470 aa8.78□□□□□ -1
RTF1-205ENST00000558298 STAT5BP51692 787 aa8.78□□□□□ -1
RTF1-205ENST00000558298 SARNPP82979 210 aaKnown RBP8.78□□□□□ -1
RTF1-205ENST00000558298 ITIH3Q06033 890 aa8.78□□□□□ -1
RTF1-205ENST00000558298 TBX2Q13207 712 aaPredicted RBP8.78□□□□□ -1
RTF1-205ENST00000558298 HIC1Q14526 733 aa8.78□□□□□ -1
RTF1-205ENST00000558298 STK38Q15208 465 aa8.78□□□□□ -1
RTF1-205ENST00000558298 TRIM71Q2Q1W2 868 aaKnown RBP8.78□□□□□ -1
RTF1-205ENST00000558298 FILIP1LQ4L180 1135 aa8.78□□□□□ -1
RTF1-205ENST00000558298 FAM160B1Q5W0V3 765 aa8.78□□□□□ -1
RTF1-205ENST00000558298 ALS2CLQ60I27 953 aa8.78□□□□□ -1
RTF1-205ENST00000558298 FAM109BQ6ICB4 259 aaPredicted RBP8.78□□□□□ -1
RTF1-205ENST00000558298 TRAF7Q6Q0C0 670 aa8.78□□□□□ -1
RTF1-205ENST00000558298 PPFIBP1Q86W92 1011 aa8.78□□□□□ -1
RTF1-205ENST00000558298 TMTC1Q8IUR5 882 aa8.78□□□□□ -1
RTF1-205ENST00000558298 CCDC60Q8IWA6 550 aaPredicted RBP8.78□□□□□ -1
RTF1-205ENST00000558298 KCTD17Q8N5Z5 321 aa8.78□□□□□ -1
RTF1-205ENST00000558298 CCDC155Q8N6L0 562 aa8.78□□□□□ -1
RTF1-205ENST00000558298 C7orf31Q8N865 590 aa8.78□□□□□ -1
RTF1-205ENST00000558298 ATP8B4Q8TF62 1192 aa8.78□□□□□ -1
RTF1-205ENST00000558298 TCP11Q8WWU5 503 aa8.78□□□□□ -1
RTF1-205ENST00000558298 DHX38Q92620 1227 aaKnown RBP8.78□□□□□ -1
RTF1-205ENST00000558298 NAPGQ99747 312 aaPredicted RBP8.78□□□□□ -1
RTF1-205ENST00000558298 LBHD1Q9BQE6 289 aaPredicted RBP8.78□□□□□ -1
RTF1-205ENST00000558298 AZI2Q9H6S1 392 aa8.78□□□□□ -1
RTF1-205ENST00000558298 TFIP11Q9UBB9 837 aaKnown RBP8.78□□□□□ -1
RTF1-205ENST00000558298 MYO6Q9UM54 1294 aa8.78□□□□□ -1
RTF1-205ENST00000558298 CEP131Q9UPN4 1083 aa8.78□□□□□ -1
RTF1-205ENST00000558298 TELO2Q9Y4R8 837 aa8.78□□□□□ -1
RTF1-205ENST00000558298 MICAL3Q7RTP6 2002 aa8.78□□□□□ -1
RTF1-205ENST00000558298 CHD7Q9P2D1 2997 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 TET1Q8NFU7 2136 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 EVPLQ92817 2033 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 FAM205CA6NFA0 338 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 KIF28PB7ZC32 967 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 AKR1B15C9JRZ8 316 aaPredicted RBP8.77□□□□□ -1.01
RTF1-205ENST00000558298 H3BQF6 201 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 TULP1O00294 542 aaPredicted RBP8.77□□□□□ -1.01
RTF1-205ENST00000558298 SLC26A4O43511 780 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 HBP1O60381 514 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 CCNT1O60563 726 aaKnown RBP8.77□□□□□ -1.01
RTF1-205ENST00000558298 PPP6R2O75170 966 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 BMP15O95972 392 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 CSF2RAP15509 400 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 ERCC5P28715 1186 aaPredicted RBP8.77□□□□□ -1.01
RTF1-205ENST00000558298 HNRNPH1P31943 449 aaKnown RBP8.77□□□□□ -1.01
RTF1-205ENST00000558298 ELF1P32519 619 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 CYP2C18P33260 490 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 SMTNP53814 917 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 MAPK8IP2Q13387 824 aaPredicted RBP8.77□□□□□ -1.01
RTF1-205ENST00000558298 BFSP2Q13515 415 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 ARID5BQ14865 1188 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 GPNMBQ14956 572 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 FAM26DQ5JW98 314 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 TMEM240Q5SV17 173 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 GDF6Q6KF10 455 aaPredicted RBP8.77□□□□□ -1.01
RTF1-205ENST00000558298 TRIM50Q86XT4 487 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 OTUD6BQ8N6M0 293 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 COG1Q8WTW3 980 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 LMBR1Q8WVP7 490 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.77□□□□□ -1.01
RTF1-205ENST00000558298 ATP6V0A1Q93050 837 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 FAM210AQ96ND0 272 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 ANKRD27Q96NW4 1050 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.77□□□□□ -1.016e-6■■□□□ 11.7
RTF1-205ENST00000558298 PPP1R12CQ9BZL4 782 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 HIPK3Q9H422 1215 aa8.77□□□□□ -1.01
RTF1-205ENST00000558298 ZNF302Q9NR11 478 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms