RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 FFAR3O14843 346 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 PAX4O43316 350 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 SCGB1D2O95969 90 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 XPAP23025 273 aaPredicted RBP2.27□□□□□ -2.05
HIF1A-212ENST00000557538 RGS3P49796 1198 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 SLC16A1P53985 500 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 MLLT6P55198 1093 aaPredicted RBP2.27□□□□□ -2.05
HIF1A-212ENST00000557538 ANTXR2P58335 489 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 PPP3CAQ08209 521 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 MALLQ13021 153 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 SMAD4Q13485 552 aaKnown RBP2.27□□□□□ -2.05
HIF1A-212ENST00000557538 USP10Q14694 798 aaKnown RBP2.27□□□□□ -2.05
HIF1A-212ENST00000557538 ODF1Q14990 250 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 THEMIS2Q5TEJ8 643 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 TTLL7Q6ZT98 887 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 GLB1L2Q8IW92 636 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 MYO1HQ8N1T3 1032 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 GLB1L3Q8NCI6 653 aaPredicted RBP2.27□□□□□ -2.05
HIF1A-212ENST00000557538 C1GALT1C1Q96EU7 318 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 DDX11Q96FC9 970 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 CARD11Q9BXL7 1154 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 CHMP4AQ9BY43 222 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 NELFAQ9H3P2 528 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 MTG2Q9H4K7 406 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 C14orf93Q9H972 538 aaKnown RBP2.27□□□□□ -2.05
HIF1A-212ENST00000557538 BCO1Q9HAY6 547 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 PRDM11Q9NQV5 511 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 ZNF180Q9UJW8 692 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 NDUFS2O75306 463 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 MYBL2P10244 700 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 GAAP10253 952 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 TRIM27P14373 513 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 IL13P35225 146 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 GNALP38405 381 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 SARSP49591 514 aaKnown RBP2.27□□□□□ -2.05
HIF1A-212ENST00000557538 EPHB4P54760 987 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 DSC2Q02487 901 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 SP140Q13342 867 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 SURF1Q15526 300 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 MLANAQ16655 118 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 PTPN21Q16825 1174 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 ABCB5Q2M3G0 1257 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 XP32Q5T750 250 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 TMC5Q6UXY8 1006 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 USP45Q70EL2 814 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 EPM2AIP1Q7L775 607 aaPredicted RBP2.27□□□□□ -2.05
HIF1A-212ENST00000557538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.27□□□□□ -2.05
HIF1A-212ENST00000557538 CFHR4Q92496 578 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 ACE2Q9BYF1 805 aaPredicted RBP2.27□□□□□ -2.05
HIF1A-212ENST00000557538 SLC6A15Q9H2J7 730 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 AASDHPPTQ9NRN7 309 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 RBM12Q9NTZ6 932 aaKnown RBP2.27□□□□□ -2.05
HIF1A-212ENST00000557538 UCKL1Q9NWZ5 548 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.27□□□□□ -2.05
HIF1A-212ENST00000557538 SMG5Q9UPR3 1016 aaKnown RBP2.27□□□□□ -2.05
HIF1A-212ENST00000557538 PMF1-BGLAPU3KQ54 211 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 RPTORQ8N122 1335 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 LY86O95711 162 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 FTH1P19P0C7X4 201 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 LGALS4P56470 323 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 GPSM2P81274 684 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 SRSF2Q01130 221 aaKnown RBP2.26□□□□□ -2.05
HIF1A-212ENST00000557538 DUSP8Q13202 625 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 KRT72Q14CN4 511 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 MLC1Q15049 377 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 MST1LQ2TV78 715 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 EMC10Q5UCC4 262 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 PPP4R3AQ6IN85 833 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 GAREM2Q75VX8 874 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 C1QL4Q86Z23 238 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 KRT78Q8N1N4 520 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 STPG3Q8N7X2 389 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.26□□□□□ -2.05
HIF1A-212ENST00000557538 SLC35G2Q8TBE7 412 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 GAB3Q8WWW8 586 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 RXFP1Q9HBX9 757 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 ZIM2Q9NZV7 527 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 CCDC194A0A1B0GVG4 234 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 HTRA2O43464 458 aaPredicted RBP2.26□□□□□ -2.05
HIF1A-212ENST00000557538 PRC1O43663 620 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 NOBOXO60393 691 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 ENDOD1O94919 500 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 ZBED1O96006 694 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 VSIG10L2P0DP72 767 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 TXKP42681 527 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 TBX4P57082 545 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 KIAA2012Q0VF49 1180 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 FAM50AQ14320 339 aaKnown RBP2.26□□□□□ -2.05
HIF1A-212ENST00000557538 CT83Q5H943 113 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 ZMAT1Q5H9K5 638 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 OTUD7BQ6GQQ9 843 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 CNKSR3Q6P9H4 555 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 LILRA6Q6PI73 481 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 UNQ6494/PRO21346Q6UXR6 183 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 HTR3DQ70Z44 454 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 DOK3Q7L591 496 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 LILRA3Q8N6C8 439 aaPredicted RBP2.26□□□□□ -2.05
HIF1A-212ENST00000557538 NUDT10Q8NFP7 164 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 NUDT11Q96G61 164 aa2.26□□□□□ -2.05
HIF1A-212ENST00000557538 DYDC2Q96IM9 177 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms