RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 ADGRA3Q8IWK6 1321 aa17.61■□□□□ 0.41
TUBB3-214ENST00000557490 EYA4O95677 639 aa17.6■□□□□ 0.41
TUBB3-214ENST00000557490 PTENP60484 403 aa17.6■□□□□ 0.41
TUBB3-214ENST00000557490 FAM173BQ6P4H8 233 aa17.6■□□□□ 0.41
TUBB3-214ENST00000557490 CMTR2Q8IYT2 770 aaKnown RBP17.6■□□□□ 0.41
TUBB3-214ENST00000557490 CRIPAKQ8N1N5 446 aa17.6■□□□□ 0.41
TUBB3-214ENST00000557490 SPRYD3Q8NCJ5 442 aa17.6■□□□□ 0.41
TUBB3-214ENST00000557490 ZNF689Q96CS4 500 aaPredicted RBP17.6■□□□□ 0.41
TUBB3-214ENST00000557490 FBXL18Q96ME1 805 aa17.6■□□□□ 0.41
TUBB3-214ENST00000557490 MMTAG2Q9BU76 263 aaKnown RBP17.6■□□□□ 0.41
TUBB3-214ENST00000557490 NT5C3AQ9H0P0 336 aa17.6■□□□□ 0.41
TUBB3-214ENST00000557490 ELAC1Q9H777 363 aaKnown RBP17.6■□□□□ 0.41
TUBB3-214ENST00000557490 TMEM161AQ9NX61 479 aa17.6■□□□□ 0.41
TUBB3-214ENST00000557490 PIN4Q9Y237 131 aaKnown RBP17.6■□□□□ 0.41
TUBB3-214ENST00000557490 LOXHD1Q8IVV2 1947 aa17.59■□□□□ 0.41
TUBB3-214ENST00000557490 EPOPA6NHQ4 379 aa17.59■□□□□ 0.41
TUBB3-214ENST00000557490 SLC26A4O43511 780 aa17.59■□□□□ 0.41
TUBB3-214ENST00000557490 GLRA2P23416 452 aa17.59■□□□□ 0.41
TUBB3-214ENST00000557490 LONP1P36776 959 aaKnown RBP17.59■□□□□ 0.41
TUBB3-214ENST00000557490 UBA7P41226 1012 aa17.59■□□□□ 0.41
TUBB3-214ENST00000557490 POU5F1BQ06416 359 aa17.59■□□□□ 0.41
TUBB3-214ENST00000557490 CAPSQ13938 189 aa17.59■□□□□ 0.41
TUBB3-214ENST00000557490 PCBP1Q15365 356 aaKnown RBP eCLIP17.59■□□□□ 0.41
TUBB3-214ENST00000557490 TWF2Q6IBS0 349 aaKnown RBP17.59■□□□□ 0.41
TUBB3-214ENST00000557490 SPRED2Q7Z698 418 aa17.59■□□□□ 0.41
TUBB3-214ENST00000557490 CABP7Q86V35 215 aa17.59■□□□□ 0.41
TUBB3-214ENST00000557490 KCTD17Q8N5Z5 321 aa17.59■□□□□ 0.41
TUBB3-214ENST00000557490 FBXO22Q8NEZ5 403 aa17.59■□□□□ 0.41
TUBB3-214ENST00000557490 C17orf80Q9BSJ5 609 aa17.59■□□□□ 0.41
TUBB3-214ENST00000557490 RC3H2Q9HBD1 1191 aaKnown RBP17.59■□□□□ 0.41
TUBB3-214ENST00000557490 GPRC5CQ9NQ84 441 aa17.59■□□□□ 0.41
TUBB3-214ENST00000557490 USP34Q70CQ2 3546 aa17.59■□□□□ 0.41
TUBB3-214ENST00000557490 TTC3P53804 2025 aa17.59■□□□□ 0.41
TUBB3-214ENST00000557490 A0A0U1RQF3 1178 aa17.58■□□□□ 0.4
TUBB3-214ENST00000557490 LRRIQ4A6NIV6 560 aa17.58■□□□□ 0.4
TUBB3-214ENST00000557490 E9PMD0 336 aa17.58■□□□□ 0.4
TUBB3-214ENST00000557490 INO80B-WBP1J3KQ70 363 aa17.58■□□□□ 0.4
TUBB3-214ENST00000557490 HOXA2O43364 376 aa17.58■□□□□ 0.4
TUBB3-214ENST00000557490 ERLIN2O94905 339 aa17.58■□□□□ 0.4
TUBB3-214ENST00000557490 SKIP12755 728 aa17.58■□□□□ 0.4
TUBB3-214ENST00000557490 CEBPZQ03701 1054 aaKnown RBP17.58■□□□□ 0.4
TUBB3-214ENST00000557490 NCBP1Q09161 790 aaKnown RBP17.58■□□□□ 0.4
TUBB3-214ENST00000557490 PAN2Q504Q3 1202 aaKnown RBP17.58■□□□□ 0.4
TUBB3-214ENST00000557490 HYIQ5T013 277 aa17.58■□□□□ 0.4
TUBB3-214ENST00000557490 ECHDC2Q86YB7 292 aa17.58■□□□□ 0.4
TUBB3-214ENST00000557490 IFNLR1Q8IU57 520 aaPredicted RBP17.58■□□□□ 0.4
TUBB3-214ENST00000557490 TMEM192Q8IY95 271 aa17.58■□□□□ 0.4
TUBB3-214ENST00000557490 RNF169Q8NCN4 708 aa17.58■□□□□ 0.4
TUBB3-214ENST00000557490 CALML4Q96GE6 196 aa17.58■□□□□ 0.4
TUBB3-214ENST00000557490 MINDY3Q9H8M7 445 aa17.58■□□□□ 0.4
TUBB3-214ENST00000557490 AGPAT5Q9NUQ2 364 aa17.58■□□□□ 0.4
TUBB3-214ENST00000557490 RWDD3Q9Y3V2 267 aa17.58■□□□□ 0.4
TUBB3-214ENST00000557490 SPTBN4Q9H254 2564 aa17.58■□□□□ 0.4
TUBB3-214ENST00000557490 COL4A6Q14031 1691 aa17.58■□□□□ 0.4
TUBB3-214ENST00000557490 ARID2Q68CP9 1835 aa17.57■□□□□ 0.4
TUBB3-214ENST00000557490 TBKBP1A7MCY6 615 aa17.57■□□□□ 0.4
TUBB3-214ENST00000557490 EOMESO95936 686 aa17.57■□□□□ 0.4
TUBB3-214ENST00000557490 MARCKSP29966 332 aaPredicted RBP17.57■□□□□ 0.4
TUBB3-214ENST00000557490 GATMP50440 423 aa17.57■□□□□ 0.4
TUBB3-214ENST00000557490 GRB10Q13322 594 aa17.57■□□□□ 0.4
TUBB3-214ENST00000557490 PPP2R5AQ15172 486 aa17.57■□□□□ 0.4
TUBB3-214ENST00000557490 PTPAQ15257 358 aa17.57■□□□□ 0.4
TUBB3-214ENST00000557490 EPC2Q52LR7 807 aa17.57■□□□□ 0.4
TUBB3-214ENST00000557490 FOXD4L5Q5VV16 416 aaPredicted RBP17.57■□□□□ 0.4
TUBB3-214ENST00000557490 ABI1Q8IZP0 508 aa17.57■□□□□ 0.4
TUBB3-214ENST00000557490 RASSF8Q8NHQ8 419 aa17.57■□□□□ 0.4
TUBB3-214ENST00000557490 FOXD4L4Q8WXT5 416 aaPredicted RBP17.57■□□□□ 0.4
TUBB3-214ENST00000557490 KIFAP3Q92845 792 aa17.57■□□□□ 0.4
TUBB3-214ENST00000557490 ZNF396Q96N95 335 aaPredicted RBP17.57■□□□□ 0.4
TUBB3-214ENST00000557490 PNMA5Q96PV4 448 aa17.57■□□□□ 0.4
TUBB3-214ENST00000557490 PLIN2Q99541 437 aa17.57■□□□□ 0.4
TUBB3-214ENST00000557490 NFKBIZQ9BYH8 718 aa17.57■□□□□ 0.4
TUBB3-214ENST00000557490 SSBP05455 408 aaKnown RBP eCLIP17.56■□□□□ 0.4
TUBB3-214ENST00000557490 ZSCAN22P10073 491 aaPredicted RBP17.56■□□□□ 0.4
TUBB3-214ENST00000557490 FGFR1P11362 822 aa17.56■□□□□ 0.4
TUBB3-214ENST00000557490 CTNNB1P35222 781 aa17.56■□□□□ 0.4
TUBB3-214ENST00000557490 RAB27AP51159 221 aa17.56■□□□□ 0.4
TUBB3-214ENST00000557490 MBTD1Q05BQ5 628 aa17.56■□□□□ 0.4
TUBB3-214ENST00000557490 TMEM119Q4V9L6 283 aa17.56■□□□□ 0.4
TUBB3-214ENST00000557490 KCNK18Q7Z418 384 aa17.56■□□□□ 0.4
TUBB3-214ENST00000557490 ZBTB8OSQ8IWT0 167 aa17.56■□□□□ 0.4
TUBB3-214ENST00000557490 GDPD5Q8WTR4 605 aa17.56■□□□□ 0.4
TUBB3-214ENST00000557490 IFT74Q96LB3 600 aa17.56■□□□□ 0.4
TUBB3-214ENST00000557490 USP28Q96RU2 1077 aa17.56■□□□□ 0.4
TUBB3-214ENST00000557490 TRAIPQ9BWF2 469 aa17.56■□□□□ 0.4
TUBB3-214ENST00000557490 C2orf40Q9H1Z8 148 aa17.56■□□□□ 0.4
TUBB3-214ENST00000557490 KCNH6Q9H252 994 aa17.56■□□□□ 0.4
TUBB3-214ENST00000557490 MRPL42Q9Y6G3 142 aaKnown RBP17.56■□□□□ 0.4
TUBB3-214ENST00000557490 COL4A4P53420 1690 aaPredicted RBP17.55■□□□□ 0.4
TUBB3-214ENST00000557490 RB1P06400 928 aa17.55■□□□□ 0.4
TUBB3-214ENST00000557490 AXLP30530 894 aa17.55■□□□□ 0.4
TUBB3-214ENST00000557490 BMPR1AP36894 532 aa17.55■□□□□ 0.4
TUBB3-214ENST00000557490 GRIN1Q05586 938 aa17.55■□□□□ 0.4
TUBB3-214ENST00000557490 BECN1Q14457 450 aa17.55■□□□□ 0.4
TUBB3-214ENST00000557490 SPOUT1Q5T280 376 aaKnown RBP17.55■□□□□ 0.4
TUBB3-214ENST00000557490 DEPTORQ8TB45 409 aa17.55■□□□□ 0.4
TUBB3-214ENST00000557490 CLP1Q92989 425 aaKnown RBP17.55■□□□□ 0.4
TUBB3-214ENST00000557490 TMEM117Q9H0C3 514 aa17.55■□□□□ 0.4
TUBB3-214ENST00000557490 FAM105AQ9NUU6 356 aa17.55■□□□□ 0.4
TUBB3-214ENST00000557490 FBXO2Q9UK22 296 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms