RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 MINDY4Q4G0A6 757 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 VWA3BQ502W6 1294 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 CCDC178Q5BJE1 867 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 IFIT1BQ5T764 474 aaKnown RBP6.02□□□□□ -1.45
PRPF39-212ENST00000557477 CCDC146Q8IYE0 955 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 GLB1L3Q8NCI6 653 aaPredicted RBP6.02□□□□□ -1.45
PRPF39-212ENST00000557477 NUDT10Q8NFP7 164 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 COA7Q96BR5 231 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 NUDT11Q96G61 164 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 FAM84AQ96KN4 292 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 GTPBP4Q9BZE4 634 aaKnown RBP6.02□□□□□ -1.45
PRPF39-212ENST00000557477 GOLGA2P5Q9HBQ8 144 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 SLC52A1Q9NWF4 448 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 GOLGA6AQ9NYA3 693 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 Q9UFV3 132 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 SCOCQ9UIL1 159 aa6.02□□□□□ -1.45
PRPF39-212ENST00000557477 LAMC3Q9Y6N6 1575 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 PDS5BQ9NTI5 1447 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 CCDC194A0A1B0GVG4 234 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 TMEM127O75204 238 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 CYP7B1O75881 506 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 KRT1P04264 644 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 U2AF1L5P0DN76 240 aaPredicted RBP6.01□□□□□ -1.45
PRPF39-212ENST00000557477 HNRNPLP14866 589 aaKnown RBP eCLIP6.01□□□□□ -1.45
PRPF39-212ENST00000557477 IL13P35225 146 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 U2AF1Q01081 240 aaKnown RBP eCLIP6.01□□□□□ -1.45
PRPF39-212ENST00000557477 TOP3AQ13472 1001 aaPredicted RBP6.01□□□□□ -1.45
PRPF39-212ENST00000557477 GTF2H3Q13889 308 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 ZNF648Q5T619 568 aaPredicted RBP6.01□□□□□ -1.45
PRPF39-212ENST00000557477 CNKSR3Q6P9H4 555 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 LILRA6Q6PI73 481 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 B3GNT9Q6UX72 402 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 BTNL9Q6UXG8 535 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 GLB1L2Q8IW92 636 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.01□□□□□ -1.45
PRPF39-212ENST00000557477 PPP1R14CQ8TAE6 165 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 ZNF526Q8TF50 670 aaPredicted RBP6.01□□□□□ -1.45
PRPF39-212ENST00000557477 NRG4Q8WWG1 115 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 NKD2Q969F2 451 aaPredicted RBP6.01□□□□□ -1.45
PRPF39-212ENST00000557477 PWWP2AQ96N64 755 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 SLC38A3Q99624 504 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 NMRK2Q9NPI5 230 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 OBP2AQ9NY56 170 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 SAE1Q9UBE0 346 aaPredicted RBP6.01□□□□□ -1.45
PRPF39-212ENST00000557477 FBXO10Q9UK96 956 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 LIMCH1Q9UPQ0 1083 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 DNM3Q9UQ16 869 aa6.01□□□□□ -1.45
PRPF39-212ENST00000557477 BAZ1AQ9NRL2 1556 aaPredicted RBP6.01□□□□□ -1.45
PRPF39-212ENST00000557477 DDX3XO00571 662 aaKnown RBP eCLIP6□□□□□ -1.45
PRPF39-212ENST00000557477 AP1G1O43747 822 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 NRP2O60462 931 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 POU2F2P09086 479 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 MED14OSP0DP75 135 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 XPAP23025 273 aaPredicted RBP6□□□□□ -1.45
PRPF39-212ENST00000557477 EDNRBP24530 442 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 AKAP5P24588 427 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 RPL13P26373 211 aaKnown RBP6□□□□□ -1.45
PRPF39-212ENST00000557477 POLD1P28340 1107 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 MCAMP43121 646 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 SLC16A1P53985 500 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 NRG3P56975 720 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 CD69Q07108 199 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 PPP3CAQ08209 521 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 EIF4HQ15056 248 aaKnown RBP6□□□□□ -1.45
PRPF39-212ENST00000557477 C3orf36Q3SXR2 165 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 MUM1L1Q5H9M0 696 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 OGFOD2Q6N063 350 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 LMBR1LQ6UX01 489 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 ATG14Q6ZNE5 492 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 SAPCD2Q86UD0 394 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 FATE1Q969F0 183 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 TIFAQ96CG3 184 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 WDR92Q96MX6 357 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 TAAR9Q96RI9 348 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 SPATA25Q9BR10 227 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 DDX20Q9UHI6 824 aaKnown RBP6□□□□□ -1.45
PRPF39-212ENST00000557477 SYNPO2Q9UMS6 1093 aa6□□□□□ -1.45
PRPF39-212ENST00000557477 CCDC154A6NI56 674 aa5.99□□□□□ -1.45
PRPF39-212ENST00000557477 HTRA2O43464 458 aaPredicted RBP5.99□□□□□ -1.45
PRPF39-212ENST00000557477 OFD1O75665 1012 aa5.99□□□□□ -1.45
PRPF39-212ENST00000557477 LY86O95711 162 aa5.99□□□□□ -1.45
PRPF39-212ENST00000557477 MAP4K4O95819 1239 aaPredicted RBP5.99□□□□□ -1.45
PRPF39-212ENST00000557477 HMGCRP04035 888 aa5.99□□□□□ -1.45
PRPF39-212ENST00000557477 HSPA6P17066 643 aa5.99□□□□□ -1.45
PRPF39-212ENST00000557477 ETV4P43268 484 aa5.99□□□□□ -1.45
PRPF39-212ENST00000557477 GRM3Q14832 879 aa5.99□□□□□ -1.45
PRPF39-212ENST00000557477 ATAT1Q5SQI0 421 aa5.99□□□□□ -1.45
PRPF39-212ENST00000557477 LARP4Q71RC2 724 aaKnown RBP eCLIP5.99□□□□□ -1.45
PRPF39-212ENST00000557477 ADGRG2Q8IZP9 1017 aa5.99□□□□□ -1.45
PRPF39-212ENST00000557477 OR2I1PQ8NGU4 316 aa5.99□□□□□ -1.45
PRPF39-212ENST00000557477 SLC35G2Q8TBE7 412 aa5.99□□□□□ -1.45
PRPF39-212ENST00000557477 DPF2Q92785 391 aa5.99□□□□□ -1.45
PRPF39-212ENST00000557477 HPS3Q969F9 1004 aa5.99□□□□□ -1.45
PRPF39-212ENST00000557477 RUNDC1Q96C34 613 aa5.99□□□□□ -1.45
PRPF39-212ENST00000557477 YTHDC1Q96MU7 727 aaKnown RBP5.99□□□□□ -1.45
PRPF39-212ENST00000557477 GREM2Q9H772 168 aa5.99□□□□□ -1.45
PRPF39-212ENST00000557477 L2HGDHQ9H9P8 463 aa5.99□□□□□ -1.45
PRPF39-212ENST00000557477 IPPQ9Y573 584 aa5.99□□□□□ -1.45
PRPF39-212ENST00000557477 A0A1B0GTL3 188 aa5.98□□□□□ -1.45
PRPF39-212ENST00000557477 A0A1W2PR48 441 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms