RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 ABCB11O95342 1321 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 IGSF9BQ9UPX0 1349 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 MCM3APO60318 1980 aa6.66□□□□□ -1.34
ATXN3-245ENST00000556958 FOCADQ5VW36 1801 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 CCDC195A0A1B0GUA6 201 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 C9IYK1 514 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 RNF225M0QZC1 329 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-245ENST00000556958 CTSAP10619 480 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 FGFR1P11362 822 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 TOP1P11387 765 aaKnown RBP6.65□□□□□ -1.34
ATXN3-245ENST00000556958 SPINK2P20155 84 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 RDXP35241 583 aaKnown RBP6.65□□□□□ -1.34
ATXN3-245ENST00000556958 RFC5P40937 340 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 CCR3P51677 355 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 FAM189BP81408 668 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 ADCY1Q08828 1119 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 ZNF252P-AS1Q0IIN9 211 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 GRIK4Q16099 956 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 TUSC1Q2TAM9 212 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 GNPTABQ3T906 1256 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 DAB2IPQ5VWQ8 1189 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 C19orf48Q6RUI8 117 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 CEP68Q76N32 757 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 PHKBQ93100 1093 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 LOXL4Q96JB6 756 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 PDCD2LQ9BRP1 358 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 FAM49AQ9H0Q0 323 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-245ENST00000556958 TMX1Q9H3N1 280 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 COL20A1Q9P218 1284 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 PCDHGC3Q9UN70 934 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 GPSM3Q9Y4H4 160 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 NEUROG3Q9Y4Z2 214 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 SUPT16HQ9Y5B9 1047 aaKnown RBP6.65□□□□□ -1.34
ATXN3-245ENST00000556958 PCDHA1Q9Y5I3 950 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 NUMBLQ9Y6R0 609 aa6.65□□□□□ -1.34
ATXN3-245ENST00000556958 TRIP12Q14669 1992 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-245ENST00000556958 CLUHO75153 1309 aa6.65□□□□□ -1.35
ATXN3-245ENST00000556958 RALGAPA2Q2PPJ7 1873 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 DSPP15924 2871 aaKnown RBP6.64□□□□□ -1.35
ATXN3-245ENST00000556958 CYSRT1A8MQ03 144 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 PATL2C9JE40 543 aaKnown RBP6.64□□□□□ -1.35
ATXN3-245ENST00000556958 LILRB3O75022 631 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 RPS6KA5O75582 802 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 CFBP00751 764 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 CEACAM1P13688 526 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 CCND2P30279 289 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 PBX3P40426 434 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 WNT7BP56706 349 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 KRT76Q01546 638 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 MTAPQ13126 283 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 HTR4Q13639 388 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 SF3A2Q15428 464 aaKnown RBP6.64□□□□□ -1.35
ATXN3-245ENST00000556958 GPATCH4Q5T3I0 446 aaKnown RBP6.64□□□□□ -1.35
ATXN3-245ENST00000556958 RNF43Q68DV7 783 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 LRRC55Q6ZSA7 311 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 MTSS1LQ765P7 747 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 CYFIP1Q7L576 1253 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 DDX53Q86TM3 631 aaKnown RBP6.64□□□□□ -1.35
ATXN3-245ENST00000556958 TRIM50Q86XT4 487 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 SAMD3Q8N6K7 520 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 RSPH1Q8WYR4 309 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 TSC1Q92574 1164 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 CASD1Q96PB1 797 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 ZBP1Q9H171 429 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 BOLA2Q9H3K6 86 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 PIDD1Q9HB75 910 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 IL17RBQ9NRM6 502 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 ERAP1Q9NZ08 941 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 MSRB2Q9Y3D2 182 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 KDM3AQ9Y4C1 1321 aa6.64□□□□□ -1.35
ATXN3-245ENST00000556958 MAN2B1O00754 1011 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 SIAH2O43255 324 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 RANBP6O60518 1105 aaKnown RBP6.63□□□□□ -1.35
ATXN3-245ENST00000556958 AP1G2O75843 785 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 STAM2O75886 525 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 CD72P21854 359 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 TARSP26639 723 aaKnown RBP6.63□□□□□ -1.35
ATXN3-245ENST00000556958 CXCL12P48061 93 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 NOVP48745 357 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 CLCN4P51793 760 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 ZNF543Q08ER8 600 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 TMEM266Q2M3C6 531 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 CCDC184Q52MB2 194 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 MARCH8Q5T0T0 291 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 STOX1Q6ZVD7 989 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 ZNF605Q86T29 641 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 LONP2Q86WA8 852 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 PROSER1Q86XN7 944 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 IFNL3Q8IZI9 196 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 GIMAP8Q8ND71 665 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-245ENST00000556958 AUTS2Q8WXX7 1259 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 SMG7Q92540 1137 aaKnown RBP6.63□□□□□ -1.35
ATXN3-245ENST00000556958 HNRNPABQ99729 332 aaKnown RBP6.63□□□□□ -1.35
ATXN3-245ENST00000556958 MRPL9Q9BYD2 267 aaKnown RBP6.63□□□□□ -1.35
ATXN3-245ENST00000556958 MYO10Q9HD67 2058 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 IL1RAPL2Q9NP60 686 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 ST3GAL5Q9UNP4 418 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 PCDHA2Q9Y5H9 948 aa6.63□□□□□ -1.35
ATXN3-245ENST00000556958 PARP14Q460N5 1801 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms