RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 PLAURQ03405 335 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 GRB14Q14449 540 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 CCL14Q16627 93 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 ZNF792Q3KQV3 632 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 PRAMEF19Q5SWL8 479 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 MFSD14CQ5VZR4 134 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 SHC4Q6S5L8 630 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 PLA2G4DQ86XP0 818 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 FBXO16Q8IX29 292 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-244ENST00000556898 TMEM87AQ8NBN3 555 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 TP53INP1Q96A56 240 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 FAM122AQ96E09 287 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 MTMR9Q96QG7 549 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 MXRA8Q9BRK3 442 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 PANK2Q9BZ23 570 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 CSRNP2Q9H175 543 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 TTYH1Q9H313 450 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-244ENST00000556898 PDGFCQ9NRA1 345 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 DNAJB12Q9NXW2 375 aaKnown RBP5.98□□□□□ -1.45
ATXN3-244ENST00000556898 FLRT1Q9NZU1 646 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 DMGDHQ9UI17 866 aaKnown RBP5.98□□□□□ -1.45
ATXN3-244ENST00000556898 CFAP45Q9UL16 551 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 PNMA2Q9UL42 364 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 UBIAD1Q9Y5Z9 338 aa5.98□□□□□ -1.45
ATXN3-244ENST00000556898 A0A087X0B3 334 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 A0A1B0GVL5 298 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 DNM1LO00429 736 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 MEIS1O00470 390 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 PPP6R2O75170 966 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 ARIH2O95376 493 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 SNAI1O95863 264 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-244ENST00000556898 OR52Z1P0C646 297 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 CCND2P30279 289 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 COPB2P35606 906 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 SCNN1AP37088 669 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 PLA2G5P39877 138 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 TECP42680 631 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 ME1P48163 572 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 RTP1P59025 263 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 ITGB3BPQ13352 177 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-244ENST00000556898 LRP8Q14114 963 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 CALCRLQ16602 461 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 C11orf91Q3C1V1 193 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 Q4G0T1 1027 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 CEP55Q53EZ4 464 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 C9orf50Q5SZB4 431 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 PCNX4Q63HM2 1172 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 PPP4R3AQ6IN85 833 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 PSAPL1Q6NUJ1 521 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 SEPT14Q6ZU15 432 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 DPP9Q86TI2 863 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 VSIG10LQ86VR7 867 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 FMR1NBQ8N0W7 255 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-244ENST00000556898 SAMD3Q8N6K7 520 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 FSIP1Q8NA03 581 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 ARRDC4Q8NCT1 418 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 ETNPPLQ8TBG4 499 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 HELQQ8TDG4 1101 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 NSUN6Q8TEA1 469 aaKnown RBP5.97□□□□□ -1.45
ATXN3-244ENST00000556898 LRRC15Q8TF66 581 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 COPS5Q92905 334 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 EPSTI1Q96J88 318 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 MAML3Q96JK9 1138 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 PLIN2Q99541 437 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 SCAND2PQ9GZW5 306 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-244ENST00000556898 EHMT1Q9H9B1 1298 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 AGO4Q9HCK5 861 aaKnown RBP5.97□□□□□ -1.45
ATXN3-244ENST00000556898 KCNMB3Q9NPA1 279 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 JADE2Q9NQC1 790 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 MAP3K20Q9NYL2 800 aaKnown RBP5.97□□□□□ -1.45
ATXN3-244ENST00000556898 SEPT3Q9UH03 358 aa5.97□□□□□ -1.45
ATXN3-244ENST00000556898 GNEQ9Y223 722 aaKnown RBP5.97□□□□□ -1.45
ATXN3-244ENST00000556898 SRPRBQ9Y5M8 271 aaKnown RBP5.97□□□□□ -1.45
ATXN3-244ENST00000556898 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-244ENST00000556898 SLC15A5A6NIM6 579 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 RBAK-RBAKDNI3L0D1 243 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 DHX15O43143 795 aaKnown RBP5.96□□□□□ -1.46
ATXN3-244ENST00000556898 CHMP2AO43633 222 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 MARCH6O60337 910 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 CUTAO60888 179 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 PFKFB1P16118 471 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 EDNRBP24530 442 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 CYP2C19P33261 490 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 NDUFA8P51970 172 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 SP2Q02086 613 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 ZRSR1Q15695 479 aaKnown RBP5.96□□□□□ -1.46
ATXN3-244ENST00000556898 STXBP2Q15833 593 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 ECM1Q16610 540 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 GJC2Q5T442 439 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-244ENST00000556898 ATL3Q6DD88 541 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 MCTP2Q6DN12 878 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 NCAPH2Q6IBW4 605 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 MOXD1Q6UVY6 613 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 SLC39A5Q6ZMH5 540 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 DTHD1Q6ZMT9 781 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 ARMCX2Q7L311 632 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 KCNG4Q8TDN1 519 aa5.96□□□□□ -1.46
ATXN3-244ENST00000556898 ATXN2LQ8WWM7 1075 aaKnown RBP5.96□□□□□ -1.46
ATXN3-244ENST00000556898 SLC5A5Q92911 643 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms