RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 ADCY8P40145 1251 aa7.04□□□□□ -1.28
HIF1A-209ENST00000556827 RAC3P60763 192 aa7.04□□□□□ -1.28
HIF1A-209ENST00000556827 TOP3AQ13472 1001 aaPredicted RBP7.04□□□□□ -1.28
HIF1A-209ENST00000556827 CDSNQ15517 529 aa7.04□□□□□ -1.28
HIF1A-209ENST00000556827 ARHGAP44Q17R89 818 aa7.04□□□□□ -1.28
HIF1A-209ENST00000556827 HS1BP3Q53T59 392 aa7.04□□□□□ -1.28
HIF1A-209ENST00000556827 CREB3L3Q68CJ9 461 aa7.04□□□□□ -1.28
HIF1A-209ENST00000556827 STRA8Q7Z7C7 330 aa7.04□□□□□ -1.28
HIF1A-209ENST00000556827 CHTF18Q8WVB6 975 aa7.04□□□□□ -1.28
HIF1A-209ENST00000556827 DLG3Q92796 817 aa7.04□□□□□ -1.28
HIF1A-209ENST00000556827 NEIL1Q96FI4 390 aaPredicted RBP7.04□□□□□ -1.28
HIF1A-209ENST00000556827 ORAI3Q9BRQ5 295 aa7.04□□□□□ -1.28
HIF1A-209ENST00000556827 KCNH7Q9NS40 1196 aa7.04□□□□□ -1.28
HIF1A-209ENST00000556827 THG1LQ9NWX6 298 aaKnown RBP7.04□□□□□ -1.28
HIF1A-209ENST00000556827 RGS17Q9UGC6 210 aaPredicted RBP7.04□□□□□ -1.28
HIF1A-209ENST00000556827 FGD6Q6ZV73 1430 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 RASSF10A6NK89 507 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 MUSKO15146 869 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 HIP1RO75146 1068 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 HMGCRP04035 888 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 MMEP08473 750 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 SLC9A1P19634 815 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 STAT3P40763 770 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 ETV4P43268 484 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 KIF11P52732 1056 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 HERVK_113P62684 666 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 IL13RA1P78552 427 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 DSG1Q02413 1049 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 ZMAT1Q5H9K5 638 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 TCTN3Q6NUS6 607 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 FILIP1Q7Z7B0 1213 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 GPR101Q96P66 508 aaPredicted RBP7.03□□□□□ -1.28
HIF1A-209ENST00000556827 FAM126AQ9BYI3 521 aaPredicted RBP7.03□□□□□ -1.28
HIF1A-209ENST00000556827 GALNT8Q9NY28 637 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 FBXO10Q9UK96 956 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 MAPRE3Q9UPY8 281 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 ZKSCAN5Q9Y2L8 839 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 JCADQ9P266 1359 aa7.03□□□□□ -1.28
HIF1A-209ENST00000556827 PRDM15P57071 1507 aaPredicted RBP7.02□□□□□ -1.29
HIF1A-209ENST00000556827 GAS7O60861 476 aa7.02□□□□□ -1.29
HIF1A-209ENST00000556827 KCNQ1P51787 676 aa7.02□□□□□ -1.29
HIF1A-209ENST00000556827 ZNF772Q68DY9 489 aaPredicted RBP7.02□□□□□ -1.29
HIF1A-209ENST00000556827 KRTAP5-3Q6L8H2 238 aa7.02□□□□□ -1.29
HIF1A-209ENST00000556827 OTOP2Q7RTS6 562 aa7.02□□□□□ -1.29
HIF1A-209ENST00000556827 TAX1BP1Q86VP1 789 aa7.02□□□□□ -1.29
HIF1A-209ENST00000556827 Q8TCH9 128 aa7.02□□□□□ -1.29
HIF1A-209ENST00000556827 WWC2-AS2Q96NR7 200 aa7.02□□□□□ -1.29
HIF1A-209ENST00000556827 CAAP1Q9H8G2 361 aa7.02□□□□□ -1.29
HIF1A-209ENST00000556827 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.02□□□□□ -1.29
HIF1A-209ENST00000556827 IFT57Q9NWB7 429 aa7.02□□□□□ -1.29
HIF1A-209ENST00000556827 OXSMQ9NWU1 459 aa7.02□□□□□ -1.29
HIF1A-209ENST00000556827 BTBD7Q9P203 1132 aa7.02□□□□□ -1.29
HIF1A-209ENST00000556827 SPATA31A6Q5VVP1 1343 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 ALKQ9UM73 1620 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 UBR1Q8IWV7 1749 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 NKTRP30414 1462 aaKnown RBP7.01□□□□□ -1.29
HIF1A-209ENST00000556827 PLEKHG1Q9ULL1 1385 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 H7C1D1 291 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 FOXS1O43638 330 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 C6P13671 934 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 SCNN1BP51168 640 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 STRN3Q13033 797 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 CATSPEREQ5SY80 951 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 CXXC5Q7LFL8 322 aaKnown RBP7.01□□□□□ -1.29
HIF1A-209ENST00000556827 KIF18BQ86Y91 864 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 KIAA1958Q8N8K9 716 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 CHAC2Q8WUX2 184 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 ASB15Q8WXK1 588 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 ERCC4Q92889 916 aaPredicted RBP7.01□□□□□ -1.29
HIF1A-209ENST00000556827 SCYL1Q96KG9 808 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 ELF4Q99607 663 aaPredicted RBP7.01□□□□□ -1.29
HIF1A-209ENST00000556827 ZDHHC5Q9C0B5 715 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 SEMA4AQ9H3S1 761 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 UCKL1Q9NWZ5 548 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 ZFR2Q9UPR6 939 aaKnown RBP7.01□□□□□ -1.29
HIF1A-209ENST00000556827 NR2E1Q9Y466 385 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 MROH1Q8NDA8 1641 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 PTPN23Q9H3S7 1636 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 LMTK2Q8IWU2 1503 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 NOS1P29475 1434 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 ANKRD50Q9ULJ7 1429 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 NCOA3Q9Y6Q9 1424 aa7.01□□□□□ -1.29
HIF1A-209ENST00000556827 RPRD2Q5VT52 1461 aaKnown RBP7□□□□□ -1.29
HIF1A-209ENST00000556827 FOXP2O15409 715 aa7□□□□□ -1.29
HIF1A-209ENST00000556827 FSHBP01225 129 aa7□□□□□ -1.29
HIF1A-209ENST00000556827 TACR2P21452 398 aa7□□□□□ -1.29
HIF1A-209ENST00000556827 PTX3P26022 381 aaPredicted RBP7□□□□□ -1.29
HIF1A-209ENST00000556827 CNGA1P29973 690 aa7□□□□□ -1.29
HIF1A-209ENST00000556827 ID4P47928 161 aa7□□□□□ -1.29
HIF1A-209ENST00000556827 RNF151Q2KHN1 245 aa7□□□□□ -1.29
HIF1A-209ENST00000556827 SPDYAQ5MJ70 313 aa7□□□□□ -1.29
HIF1A-209ENST00000556827 DDX46Q7L014 1031 aaKnown RBP7□□□□□ -1.29
HIF1A-209ENST00000556827 SMC1BQ8NDV3 1235 aa7□□□□□ -1.29
HIF1A-209ENST00000556827 HIPK4Q8NE63 616 aa7□□□□□ -1.29
HIF1A-209ENST00000556827 OR2W6PQ8NHA6 318 aa7□□□□□ -1.29
HIF1A-209ENST00000556827 BTBD2Q9BX70 525 aa7□□□□□ -1.29
HIF1A-209ENST00000556827 KIAA1683Q9H0B3 1180 aa7□□□□□ -1.29
HIF1A-209ENST00000556827 PCIF1Q9H4Z3 704 aa7□□□□□ -1.29
HIF1A-209ENST00000556827 SPC25Q9HBM1 224 aa7□□□□□ -1.29
HIF1A-209ENST00000556827 SPTLC3Q9NUV7 552 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms