RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 PBX3P40426 434 aa17.21■□□□□ 0.35
SNX6-205ENST00000555648 ERVFC1P60507 584 aa17.21■□□□□ 0.35
SNX6-205ENST00000555648 LAMTOR4Q0VGL1 99 aa17.21■□□□□ 0.35
SNX6-205ENST00000555648 TFDP1Q14186 410 aa17.21■□□□□ 0.35
SNX6-205ENST00000555648 LONRF3Q496Y0 759 aa17.21■□□□□ 0.35
SNX6-205ENST00000555648 CCDC83Q8IWF9 413 aa17.21■□□□□ 0.35
SNX6-205ENST00000555648 ZNF579Q8NAF0 562 aaKnown RBP17.21■□□□□ 0.35
SNX6-205ENST00000555648 FAM184AQ8NB25 1140 aa17.21■□□□□ 0.35
SNX6-205ENST00000555648 RNF149Q8NC42 400 aa17.21■□□□□ 0.35
SNX6-205ENST00000555648 URGCPQ8TCY9 931 aa17.21■□□□□ 0.35
SNX6-205ENST00000555648 TMEM169Q96HH4 297 aa17.21■□□□□ 0.35
SNX6-205ENST00000555648 C8orf76Q96K31 380 aa17.21■□□□□ 0.35
SNX6-205ENST00000555648 LRFN3Q9BTN0 628 aa17.21■□□□□ 0.35
SNX6-205ENST00000555648 TRAIPQ9BWF2 469 aa17.21■□□□□ 0.35
SNX6-205ENST00000555648 BARX2Q9UMQ3 279 aaPredicted RBP17.21■□□□□ 0.35
SNX6-205ENST00000555648 HCN4Q9Y3Q4 1203 aa17.21■□□□□ 0.35
SNX6-205ENST00000555648 EVPLQ92817 2033 aa17.21■□□□□ 0.35
SNX6-205ENST00000555648 ZC3H11AO75152 810 aaKnown RBP eCLIP17.2■□□□□ 0.34
SNX6-205ENST00000555648 SLITRK3O94933 977 aa17.2■□□□□ 0.34
SNX6-205ENST00000555648 GUCY1B3Q02153 619 aa17.2■□□□□ 0.34
SNX6-205ENST00000555648 COASYQ13057 564 aa17.2■□□□□ 0.34
SNX6-205ENST00000555648 MXD4Q14582 209 aaPredicted RBP17.2■□□□□ 0.34
SNX6-205ENST00000555648 DUSP6Q16828 381 aa17.2■□□□□ 0.34
SNX6-205ENST00000555648 NOMO2Q5JPE7 1267 aa17.2■□□□□ 0.34
SNX6-205ENST00000555648 FERMT3Q86UX7 667 aa17.2■□□□□ 0.34
SNX6-205ENST00000555648 KHSRPQ92945 711 aaKnown RBP eCLIP17.2■□□□□ 0.34
SNX6-205ENST00000555648 LPPQ93052 612 aa17.2■□□□□ 0.34
SNX6-205ENST00000555648 ZSCAN31Q96LW9 406 aaPredicted RBP17.2■□□□□ 0.34
SNX6-205ENST00000555648 LLPHQ9BRT6 129 aaKnown RBP17.2■□□□□ 0.34
SNX6-205ENST00000555648 IFT122Q9HBG6 1241 aa17.2■□□□□ 0.34
SNX6-205ENST00000555648 ANKEF1Q9NU02 776 aa17.2■□□□□ 0.34
SNX6-205ENST00000555648 AGPAT5Q9NUQ2 364 aa17.2■□□□□ 0.34
SNX6-205ENST00000555648 BRWD1Q9NSI6 2320 aa17.19■□□□□ 0.34
SNX6-205ENST00000555648 FAM86C2PA6NEL3 165 aa17.19■□□□□ 0.34
SNX6-205ENST00000555648 FSCN2O14926 492 aa17.19■□□□□ 0.34
SNX6-205ENST00000555648 DCXO43602 365 aa17.19■□□□□ 0.34
SNX6-205ENST00000555648 GPR37L1O60883 481 aa17.19■□□□□ 0.34
SNX6-205ENST00000555648 DGAT1O75907 488 aa17.19■□□□□ 0.34
SNX6-205ENST00000555648 EYA4O95677 639 aa17.19■□□□□ 0.34
SNX6-205ENST00000555648 ATF7P17544 494 aaPredicted RBP17.19■□□□□ 0.34
SNX6-205ENST00000555648 MCM7P33993 719 aa17.19■□□□□ 0.34
SNX6-205ENST00000555648 BCAR1P56945 870 aa17.19■□□□□ 0.34
SNX6-205ENST00000555648 HMGN5P82970 282 aaKnown RBP17.19■□□□□ 0.34
SNX6-205ENST00000555648 SPIRE1Q08AE8 756 aa17.19■□□□□ 0.34
SNX6-205ENST00000555648 SMC1AQ14683 1233 aaKnown RBP17.19■□□□□ 0.34
SNX6-205ENST00000555648 SLC39A11Q8N1S5 342 aa17.19■□□□□ 0.34
SNX6-205ENST00000555648 MSLNLQ96KJ4 702 aa17.19■□□□□ 0.34
SNX6-205ENST00000555648 FAM193BQ96PV7 902 aaPredicted RBP17.19■□□□□ 0.34
SNX6-205ENST00000555648 GBP3Q9H0R5 595 aa17.19■□□□□ 0.34
SNX6-205ENST00000555648 CLEC1BQ9P126 229 aa17.19■□□□□ 0.34
SNX6-205ENST00000555648 PCDHB2Q9Y5E7 798 aa17.19■□□□□ 0.34
SNX6-205ENST00000555648 NCOR1O75376 2440 aa17.19■□□□□ 0.34
SNX6-205ENST00000555648 TRANK1O15050 2925 aa17.19■□□□□ 0.34
SNX6-205ENST00000555648 NT5C1B-RDH14C9J2C7 533 aa17.18■□□□□ 0.34
SNX6-205ENST00000555648 ZBTB39O15060 712 aa17.18■□□□□ 0.34
SNX6-205ENST00000555648 ZNF623O75123 536 aa17.18■□□□□ 0.34
SNX6-205ENST00000555648 LYPLA2O95372 231 aa17.18■□□□□ 0.34
SNX6-205ENST00000555648 PCBP1Q15365 356 aaKnown RBP eCLIP17.18■□□□□ 0.34
SNX6-205ENST00000555648 LLGL2Q6P1M3 1020 aa17.18■□□□□ 0.34
SNX6-205ENST00000555648 SMRP1Q8NCR6 262 aa17.18■□□□□ 0.34
SNX6-205ENST00000555648 ERMNQ8TAM6 284 aa17.18■□□□□ 0.34
SNX6-205ENST00000555648 HSD17B14Q9BPX1 270 aa17.18■□□□□ 0.34
SNX6-205ENST00000555648 SH2B1Q9NRF2 756 aaPredicted RBP17.18■□□□□ 0.34
SNX6-205ENST00000555648 MYO7AQ13402 2215 aa17.17■□□□□ 0.34
SNX6-205ENST00000555648 C19orf67A6NJJ6 358 aa17.17■□□□□ 0.34
SNX6-205ENST00000555648 INO80B-WBP1J3KQ70 363 aa17.17■□□□□ 0.34
SNX6-205ENST00000555648 GLP2RO95838 553 aa17.17■□□□□ 0.34
SNX6-205ENST00000555648 TECP42680 631 aa17.17■□□□□ 0.34
SNX6-205ENST00000555648 RBM25P49756 843 aaKnown RBP17.17■□□□□ 0.34
SNX6-205ENST00000555648 CNNM3Q8NE01 707 aa17.17■□□□□ 0.34
SNX6-205ENST00000555648 RSAD1Q9HA92 442 aa17.17■□□□□ 0.34
SNX6-205ENST00000555648 SPTBN5Q9NRC6 3674 aaKnown RBP17.17■□□□□ 0.34
SNX6-205ENST00000555648 TBC1D13Q9NVG8 400 aa17.17■□□□□ 0.34
SNX6-205ENST00000555648 KANSL3Q9P2N6 904 aa17.17■□□□□ 0.34
SNX6-205ENST00000555648 RAPGEFL1Q9UHV5 662 aa17.17■□□□□ 0.34
SNX6-205ENST00000555648 USP15Q9Y4E8 981 aaPredicted RBP17.17■□□□□ 0.34
SNX6-205ENST00000555648 LOXHD1Q8IVV2 1947 aa17.16■□□□□ 0.34
SNX6-205ENST00000555648 HIDE1A8MVS5 230 aa17.16■□□□□ 0.34
SNX6-205ENST00000555648 OFD1O75665 1012 aa17.16■□□□□ 0.34
SNX6-205ENST00000555648 CXCL14O95715 111 aa17.16■□□□□ 0.34
SNX6-205ENST00000555648 AXLP30530 894 aa17.16■□□□□ 0.34
SNX6-205ENST00000555648 NOTUMQ6P988 496 aa17.16■□□□□ 0.34
SNX6-205ENST00000555648 HACE1Q8IYU2 909 aa17.16■□□□□ 0.34
SNX6-205ENST00000555648 VPS52Q8N1B4 723 aa17.16■□□□□ 0.34
SNX6-205ENST00000555648 MRPL43Q8N983 215 aaKnown RBP17.16■□□□□ 0.34
SNX6-205ENST00000555648 PIGOQ8TEQ8 1089 aa17.16■□□□□ 0.34
SNX6-205ENST00000555648 CASP10Q92851 521 aa17.16■□□□□ 0.34
SNX6-205ENST00000555648 MTMR9Q96QG7 549 aa17.16■□□□□ 0.34
SNX6-205ENST00000555648 TRIM6Q9C030 488 aaPredicted RBP17.16■□□□□ 0.34
SNX6-205ENST00000555648 FOXP1Q9H334 677 aaPredicted RBP17.16■□□□□ 0.34
SNX6-205ENST00000555648 MINDY3Q9H8M7 445 aa17.16■□□□□ 0.34
SNX6-205ENST00000555648 UBN1Q9NPG3 1134 aa17.16■□□□□ 0.34
SNX6-205ENST00000555648 NOL7Q9UMY1 257 aaKnown RBP17.16■□□□□ 0.34
SNX6-205ENST00000555648 CNTNAP2Q9UHC6 1331 aa17.16■□□□□ 0.34
SNX6-205ENST00000555648 POTEMA6NI47 508 aa17.15■□□□□ 0.34
SNX6-205ENST00000555648 USO1O60763 962 aaKnown RBP17.15■□□□□ 0.34
SNX6-205ENST00000555648 XRCC6P12956 609 aaKnown RBP eCLIP17.15■□□□□ 0.34
SNX6-205ENST00000555648 ITGA4P13612 1032 aa17.15■□□□□ 0.34
SNX6-205ENST00000555648 HOXB8P17481 243 aaPredicted RBP17.15■□□□□ 0.34
SNX6-205ENST00000555648 RARRES1P49788 294 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms