RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 PRDM4Q9UKN5 801 aa23.09■■□□□ 1.29
ARHGEF40-204ENST00000555038 ZNF214Q9UL59 606 aaPredicted RBP23.09■■□□□ 1.29
ARHGEF40-204ENST00000555038 HPCAL4Q9UM19 191 aa23.09■■□□□ 1.29
ARHGEF40-204ENST00000555038 EPHB4P54760 987 aa23.09■■□□□ 1.29
ARHGEF40-204ENST00000555038 PLS1Q14651 629 aa23.09■■□□□ 1.29
ARHGEF40-204ENST00000555038 OLIG1Q8TAK6 271 aa23.09■■□□□ 1.29
ARHGEF40-204ENST00000555038 LNX1Q8TBB1 728 aaPredicted RBP23.09■■□□□ 1.29
ARHGEF40-204ENST00000555038 U2AF1L4Q8WU68 220 aaKnown RBP23.09■■□□□ 1.29
ARHGEF40-204ENST00000555038 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.09■■□□□ 1.29
ARHGEF40-204ENST00000555038 RIPK3Q9Y572 518 aa23.09■■□□□ 1.29
ARHGEF40-204ENST00000555038 PEX3P56589 373 aa23.08■■□□□ 1.29
ARHGEF40-204ENST00000555038 RTP1P59025 263 aa23.08■■□□□ 1.29
ARHGEF40-204ENST00000555038 TNNC1P63316 161 aa23.08■■□□□ 1.29
ARHGEF40-204ENST00000555038 NNTQ13423 1086 aa23.08■■□□□ 1.29
ARHGEF40-204ENST00000555038 EPC2Q52LR7 807 aa23.08■■□□□ 1.29
ARHGEF40-204ENST00000555038 EMSYQ7Z589 1322 aa23.08■■□□□ 1.29
ARHGEF40-204ENST00000555038 MAP4K3Q8IVH8 894 aa23.08■■□□□ 1.29
ARHGEF40-204ENST00000555038 ACTRT1Q8TDG2 376 aa23.08■■□□□ 1.29
ARHGEF40-204ENST00000555038 CBWD1Q9BRT8 395 aa23.08■■□□□ 1.29
ARHGEF40-204ENST00000555038 NTPCRQ9BSD7 190 aaKnown RBP23.08■■□□□ 1.29
ARHGEF40-204ENST00000555038 TEX13BQ9BXU2 312 aa23.08■■□□□ 1.29
ARHGEF40-204ENST00000555038 SUCLA2Q9P2R7 463 aaPredicted RBP23.08■■□□□ 1.29
ARHGEF40-204ENST00000555038 DMGDHQ9UI17 866 aaKnown RBP23.08■■□□□ 1.29
ARHGEF40-204ENST00000555038 DMP1Q13316 513 aaPredicted RBP23.07■■□□□ 1.28
ARHGEF40-204ENST00000555038 FAM102BQ5T8I3 360 aa23.07■■□□□ 1.28
ARHGEF40-204ENST00000555038 CATSPERGQ6ZRH7 1159 aa23.07■■□□□ 1.28
ARHGEF40-204ENST00000555038 IFT20Q8IY31 132 aa23.07■■□□□ 1.28
ARHGEF40-204ENST00000555038 USP38Q8NB14 1042 aa23.07■■□□□ 1.28
ARHGEF40-204ENST00000555038 RFFLQ8WZ73 363 aa23.07■■□□□ 1.28
ARHGEF40-204ENST00000555038 ZKSCAN4Q969J2 545 aaPredicted RBP23.07■■□□□ 1.28
ARHGEF40-204ENST00000555038 CCDC102AQ96A19 550 aa23.07■■□□□ 1.28
ARHGEF40-204ENST00000555038 ACAD9Q9H845 621 aa23.07■■□□□ 1.28
ARHGEF40-204ENST00000555038 ZCCHC17Q9NP64 241 aaKnown RBP23.07■■□□□ 1.28
ARHGEF40-204ENST00000555038 TMOD4Q9NZQ9 345 aa23.07■■□□□ 1.28
ARHGEF40-204ENST00000555038 KCNG1Q9UIX4 513 aa23.07■■□□□ 1.28
ARHGEF40-204ENST00000555038 COL11A1P12107 1806 aaPredicted RBP23.07■■□□□ 1.28
ARHGEF40-204ENST00000555038 PSAPP07602 524 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 KCNA2P16389 499 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 MATR3P43243 847 aaKnown RBP eCLIP23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 GALCP54803 685 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 ANGEL2Q5VTE6 544 aaKnown RBP23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 PHLDB3Q6NSJ2 640 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 RDH13Q8NBN7 331 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 TMEM161BQ8NDZ6 487 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 WNK4Q96J92 1243 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 MS4A14Q96JA4 679 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 PCIF1Q9H4Z3 704 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 EHD2Q9NZN4 543 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 TMEM59LQ9UK28 342 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 TBX20Q9UMR3 447 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 SLC16A4O15374 487 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 ZMYND10O75800 440 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 MYBL2P10244 700 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 TNFAIP3P21580 790 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 HMGCS2P54868 508 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 GNPTABQ3T906 1256 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 ANO5Q75V66 913 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 USP37Q86T82 979 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 MCPH1Q8NEM0 835 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 CTNNBL1Q8WYA6 563 aaPredicted RBP23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 CAVIN3Q969G5 261 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 KLRG1Q96E93 195 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 HOXC10Q9NYD6 342 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 ADAM21Q9UKJ8 722 aa23.06■■□□□ 1.28
ARHGEF40-204ENST00000555038 H0YCG3 227 aa23.05■■□□□ 1.28
ARHGEF40-204ENST00000555038 KCNK3O14649 394 aa23.05■■□□□ 1.28
ARHGEF40-204ENST00000555038 SCP2P22307 547 aa23.05■■□□□ 1.28
ARHGEF40-204ENST00000555038 MXI1P50539 228 aa23.05■■□□□ 1.28
ARHGEF40-204ENST00000555038 PPP3CAQ08209 521 aa23.05■■□□□ 1.28
ARHGEF40-204ENST00000555038 PEX26Q7Z412 305 aa23.05■■□□□ 1.28
ARHGEF40-204ENST00000555038 GLYCTKQ8IVS8 523 aa23.05■■□□□ 1.28
ARHGEF40-204ENST00000555038 EIF1ADQ8N9N8 165 aaKnown RBP23.05■■□□□ 1.28
ARHGEF40-204ENST00000555038 HDAC7Q8WUI4 952 aa23.05■■□□□ 1.28
ARHGEF40-204ENST00000555038 GDF3Q9NR23 364 aa23.05■■□□□ 1.28
ARHGEF40-204ENST00000555038 SMARCAL1Q9NZC9 954 aa23.05■■□□□ 1.28
ARHGEF40-204ENST00000555038 STXBP5LQ9Y2K9 1186 aa23.05■■□□□ 1.28
ARHGEF40-204ENST00000555038 DIS3Q9Y2L1 958 aaKnown RBP23.05■■□□□ 1.28
ARHGEF40-204ENST00000555038 ZC3H4Q9UPT8 1303 aaKnown RBP23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 DGAT1O75907 488 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 NPTX2P47972 431 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 TMEM132BQ14DG7 1078 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 TCEAL1Q15170 157 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 C1orf220Q5T0J3 134 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 PLA2G4FQ68DD2 849 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 GPRC5CQ9NQ84 441 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 CYP39A1Q9NYL5 469 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 LOC285556D6RIA3 1793 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 GOLGB1Q14789 3259 aaKnown RBP23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 ANKRD62A6NC57 917 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 GTF2H1P32780 548 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 HADHBP55084 474 aaKnown RBP23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 DLG4P78352 724 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 SUPT20HL1Q3ZLR7 823 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 SH3D19Q5HYK7 790 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 TMC2Q8TDI7 906 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 AGPAT1Q99943 283 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 JPH1Q9HDC5 661 aaPredicted RBP23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 KMT5AQ9NQR1 393 aa23.04■■□□□ 1.28
ARHGEF40-204ENST00000555038 VPS18Q9P253 973 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms