RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 PLCB3Q01970 1234 aa11.14□□□□□ -0.63
ACTN1-208ENST00000553370 ANKRD54Q6NXT1 300 aa11.14□□□□□ -0.63
ACTN1-208ENST00000553370 TBCKQ8TEA7 893 aa11.14□□□□□ -0.63
ACTN1-208ENST00000553370 PRRX2Q99811 253 aa11.14□□□□□ -0.63
ACTN1-208ENST00000553370 UNC45AQ9H3U1 944 aa11.14□□□□□ -0.63
ACTN1-208ENST00000553370 SH3GLB2Q9NR46 395 aa11.14□□□□□ -0.63
ACTN1-208ENST00000553370 PIN4Q9Y237 131 aaKnown RBP11.14□□□□□ -0.63
ACTN1-208ENST00000553370 INPP5FQ9Y2H2 1132 aa11.14□□□□□ -0.63
ACTN1-208ENST00000553370 MTCL1Q9Y4B5 1905 aaKnown RBP11.13□□□□□ -0.63
ACTN1-208ENST00000553370 RIF1Q5UIP0 2472 aaKnown RBP11.13□□□□□ -0.63
ACTN1-208ENST00000553370 DENND4AQ7Z401 1863 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 ZFHX2Q9C0A1 2572 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-208ENST00000553370 SPTBN4Q9H254 2564 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-208ENST00000553370 DDX11L8A8MPP1 907 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 FSCN2O14926 492 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 SKIP12755 728 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 IFNAR1P17181 557 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 HOXB8P17481 243 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-208ENST00000553370 HSPA4P34932 840 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 USP11P51784 963 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 FAM189BP81408 668 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 CDC42EP1Q00587 391 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 SIGLEC14Q08ET2 396 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 STK3Q13188 491 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 DSC3Q14574 896 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 UGCGQ16739 394 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 LONRF3Q496Y0 759 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 XKR3Q5GH77 459 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 GLB1LQ6UWU2 654 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 CATSPER4Q7RTX7 472 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 RHPN2Q8IUC4 686 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 VN1R2Q8NFZ6 395 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 RDM1Q8NG50 284 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 URGCPQ8TCY9 931 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 CRYGNQ8WXF5 182 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 SLC5A5Q92911 643 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 NLRP4Q96MN2 994 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 CASD1Q96PB1 797 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 JPH2Q9BR39 696 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-208ENST00000553370 INO80BQ9C086 356 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-208ENST00000553370 GBP3Q9H0R5 595 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 ADAMTS10Q9H324 1103 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 PCDHA4Q9UN74 947 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 PCDHGA4Q9Y5G9 962 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 CYP46A1Q9Y6A2 500 aa11.13□□□□□ -0.63
ACTN1-208ENST00000553370 FAM186AA6NE01 2351 aa11.12□□□□□ -0.63
ACTN1-208ENST00000553370 CCDC194A0A1B0GVG4 234 aa11.12□□□□□ -0.63
ACTN1-208ENST00000553370 CARNS1A5YM72 827 aa11.12□□□□□ -0.63
ACTN1-208ENST00000553370 HIDE1A8MVS5 230 aa11.12□□□□□ -0.63
ACTN1-208ENST00000553370 ADAMTS3O15072 1205 aa11.12□□□□□ -0.63
ACTN1-208ENST00000553370 ZNF862O60290 1169 aa11.12□□□□□ -0.63
ACTN1-208ENST00000553370 CSDE1O75534 798 aaKnown RBP11.12□□□□□ -0.63
ACTN1-208ENST00000553370 DEXIO95424 95 aa11.12□□□□□ -0.63
ACTN1-208ENST00000553370 TDP2O95551 362 aa11.12□□□□□ -0.63
ACTN1-208ENST00000553370 EOMESO95936 686 aa11.12□□□□□ -0.63
ACTN1-208ENST00000553370 NONOQ15233 471 aaKnown RBP eCLIP11.12□□□□□ -0.63
ACTN1-208ENST00000553370 PTPN21Q16825 1174 aa11.12□□□□□ -0.63
ACTN1-208ENST00000553370 CLLU1OSQ5K130 101 aa11.12□□□□□ -0.63
ACTN1-208ENST00000553370 BLIDQ8IZY5 108 aa11.12□□□□□ -0.63
ACTN1-208ENST00000553370 FBXL6Q8N531 539 aa11.12□□□□□ -0.63
ACTN1-208ENST00000553370 GJA10Q969M2 543 aa11.12□□□□□ -0.63
ACTN1-208ENST00000553370 LENG9Q96B70 501 aa11.12□□□□□ -0.63
ACTN1-208ENST00000553370 CCDC43Q96MW1 224 aaKnown RBP11.12□□□□□ -0.63
ACTN1-208ENST00000553370 NECTIN4Q96NY8 510 aa11.12□□□□□ -0.63
ACTN1-208ENST00000553370 FAM193BQ96PV7 902 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-208ENST00000553370 SUCLA2Q9P2R7 463 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-208ENST00000553370 DDX25Q9UHL0 483 aaKnown RBP11.12□□□□□ -0.63
ACTN1-208ENST00000553370 PLXNA3P51805 1871 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 A0A087WZ62 844 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 A0A0U1RQF3 1178 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 NT5C1B-RDH14C9J2C7 533 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 TRAK2O60296 914 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 DKC1O60832 514 aaKnown RBP eCLIP11.11□□□□□ -0.63
ACTN1-208ENST00000553370 CDKL5O76039 1030 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 CXCL14O95715 111 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 XBP1P17861 261 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 PDIA3P30101 505 aaKnown RBP11.11□□□□□ -0.63
ACTN1-208ENST00000553370 MTHFRP42898 656 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 RAB27AP51159 221 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 POLGP54098 1239 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-208ENST00000553370 BCAR1P56945 870 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 MTMR3Q13615 1198 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 MCM6Q14566 821 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 LETM2Q2VYF4 491 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 Q4G0T1 1027 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 RARS2Q5T160 578 aaKnown RBP11.11□□□□□ -0.63
ACTN1-208ENST00000553370 LRRC55Q6ZSA7 311 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 RUFY3Q7L099 469 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 KRT25Q7Z3Z0 450 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 ZNF410Q86VK4 478 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 VPS52Q8N1B4 723 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 SLC39A11Q8N1S5 342 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 TDRD5Q8NAT2 981 aaKnown RBP11.11□□□□□ -0.63
ACTN1-208ENST00000553370 SLC7A3Q8WY07 619 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 RSPH1Q8WYR4 309 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 PGBD4Q96DM1 585 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 RIPOR3Q96MK2 946 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 SH2D3AQ9BRG2 576 aa11.11□□□□□ -0.63
ACTN1-208ENST00000553370 FDXACB1Q9BRP7 624 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms