RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 MINDY3Q9H8M7 445 aa13.02□□□□□ -0.33
SMARCD1-208ENST00000550280 SH3GLB2Q9NR46 395 aa13.02□□□□□ -0.33
SMARCD1-208ENST00000550280 CHST12Q9NRB3 414 aa13.02□□□□□ -0.33
SMARCD1-208ENST00000550280 FAM105AQ9NUU6 356 aa13.02□□□□□ -0.33
SMARCD1-208ENST00000550280 DACT1Q9NYF0 836 aa13.02□□□□□ -0.33
SMARCD1-208ENST00000550280 PCDHA4Q9UN74 947 aa13.02□□□□□ -0.33
SMARCD1-208ENST00000550280 PIN4Q9Y237 131 aaKnown RBP13.02□□□□□ -0.33
SMARCD1-208ENST00000550280 ZFHX2Q9C0A1 2572 aaPredicted RBP13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 VPS13AQ96RL7 3174 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 GALR2O43603 387 aaPredicted RBP13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 ST18O60284 1047 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 GFRA3O60609 400 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 DTNBO60941 627 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 LILRB3O75022 631 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 ZNF623O75123 536 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 DDHD2O94830 711 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 ALDH7A1P49419 539 aaKnown RBP13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 NPEPPSP55786 919 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 NLRP5P59047 1200 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 MTMR3Q13615 1198 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 PTPN14Q15678 1187 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 NOMO2Q5JPE7 1267 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 UBXN11Q5T124 520 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 TWF2Q6IBS0 349 aaKnown RBP13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 ASCL5Q7RTU5 278 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 ZBTB33Q86T24 672 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 RHPN2Q8IUC4 686 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 ZDHHC14Q8IZN3 488 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 TMEM169Q96HH4 297 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 NECTIN4Q96NY8 510 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 SUCLA2Q9P2R7 463 aaPredicted RBP13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 LIMD1Q9UGP4 676 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 VAV3Q9UKW4 847 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 INPP5FQ9Y2H2 1132 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 NR2E1Q9Y466 385 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 DENND4AQ7Z401 1863 aa13.01□□□□□ -0.33
SMARCD1-208ENST00000550280 DDX11L8A8MPP1 907 aa13□□□□□ -0.33
SMARCD1-208ENST00000550280 HOXA11P31270 313 aaPredicted RBP13□□□□□ -0.33
SMARCD1-208ENST00000550280 MTHFRP42898 656 aa13□□□□□ -0.33
SMARCD1-208ENST00000550280 POLGP54098 1239 aaPredicted RBP13□□□□□ -0.33
SMARCD1-208ENST00000550280 CWF19L1Q69YN2 538 aaKnown RBP13□□□□□ -0.33
SMARCD1-208ENST00000550280 CES5AQ6NT32 575 aa13□□□□□ -0.33
SMARCD1-208ENST00000550280 TMC5Q6UXY8 1006 aa13□□□□□ -0.33
SMARCD1-208ENST00000550280 ZNF410Q86VK4 478 aa13□□□□□ -0.33
SMARCD1-208ENST00000550280 UBALD2Q8IYN6 164 aa13□□□□□ -0.33
SMARCD1-208ENST00000550280 DAGLBQ8NCG7 672 aa13□□□□□ -0.33
SMARCD1-208ENST00000550280 ATOH1Q92858 354 aaPredicted RBP13□□□□□ -0.33
SMARCD1-208ENST00000550280 NLRP4Q96MN2 994 aa13□□□□□ -0.33
SMARCD1-208ENST00000550280 AGPAT5Q9NUQ2 364 aa13□□□□□ -0.33
SMARCD1-208ENST00000550280 PROB1E7EW31 1015 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 N4BP1O75113 896 aaKnown RBP12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 EFEMP2O95967 443 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 CNPP09543 421 aaKnown RBP12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 NPR3P17342 541 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 SFPQP23246 707 aaKnown RBP eCLIP12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 CA8P35219 290 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 CLCN4P51793 760 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 AKAP17AQ02040 695 aaKnown RBP12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 INF2Q27J81 1249 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 MOXD1Q6UVY6 613 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 GLB1LQ6UWU2 654 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 CATSPER4Q7RTX7 472 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 MRPL10Q7Z7H8 261 aaKnown RBP12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 BLIDQ8IZY5 108 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 TDRD5Q8NAT2 981 aaKnown RBP12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 SNX27Q96L92 541 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 KLHL5Q96PQ7 755 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 GBP3Q9H0R5 595 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 KCNMB3Q9NPA1 279 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 CYP26B1Q9NR63 512 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 GJB4Q9NTQ9 266 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 DZANK1Q9NVP4 752 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 MARCH5Q9NX47 278 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 PCDHB2Q9Y5E7 798 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 MYO10Q9HD67 2058 aa12.99□□□□□ -0.33
SMARCD1-208ENST00000550280 F8W810 466 aa12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 ZBTB39O15060 712 aa12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 PI15O43692 258 aa12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 PSMC5P62195 406 aa12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 PPP2R5CQ13362 524 aa12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 EARS2Q5JPH6 523 aaKnown RBP12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 RUFY3Q7L099 469 aa12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 TAS1R1Q7RTX1 841 aa12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 GPR149Q86SP6 731 aa12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 RNF168Q8IYW5 571 aaPredicted RBP12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 SMG8Q8ND04 991 aaKnown RBP12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 HAS1Q92839 578 aa12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 TMEM143Q96AN5 459 aa12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 DHX33Q9H6R0 707 aaKnown RBP12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 ZSWIM6Q9HCJ5 1215 aa12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 BMP2KQ9NSY1 1161 aaPredicted RBP12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 DDX25Q9UHL0 483 aaKnown RBP12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 KCNJ14Q9UNX9 436 aa12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 USTQ9Y2C2 406 aa12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 COL4A3BPQ9Y5P4 624 aa12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 DCHS1Q96JQ0 3298 aa12.98□□□□□ -0.33
SMARCD1-208ENST00000550280 SSBP05455 408 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMARCD1-208ENST00000550280 NBL1P41271 181 aa12.97□□□□□ -0.33
SMARCD1-208ENST00000550280 RAB27AP51159 221 aa12.97□□□□□ -0.33
SMARCD1-208ENST00000550280 NUBP1P53384 320 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms