RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	CHMP5	Q9NZZ3	219 aa		13.24	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	LRRIQ4	A6NIV6	560 aa		13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188		E9PMD0	336 aa		13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	INO80B-WBP1	J3KQ70	363 aa		13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	SLC26A4	O43511	780 aa		13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	TSPAN1	O60635	241 aa		13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	ZSCAN22	P10073	491 aa	Predicted RBP	13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	ATF7	P17544	494 aa	Predicted RBP	13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	AXL	P30530	894 aa		13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	HOXA11	P31270	313 aa	Predicted RBP	13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	LONP1	P36776	959 aa	Known RBP	13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	MBTD1	Q05BQ5	628 aa		13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	GPM6B	Q13491	265 aa		13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	PPP2R5A	Q15172	486 aa		13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	ZRSR1	Q15695	479 aa	Known RBP	13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	NAALADL2	Q58DX5	795 aa		13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	ATL3	Q6DD88	541 aa		13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	ZNF598	Q86UK7	904 aa	Known RBP	13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.23	□□□□□ -0.29	1e-8	■■□□□ 13.7
ARFGAP1-223	ENST00000550188	LRRC43	Q8N309	656 aa		13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	SLC17A8	Q8NDX2	589 aa		13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	RSPH1	Q8WYR4	309 aa		13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	KIFAP3	Q92845	792 aa		13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	MRPL38	Q96DV4	380 aa	Known RBP	13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	FAM105A	Q9NUU6	356 aa		13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	ARID2	Q68CP9	1835 aa		13.23	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	COL4A4	P53420	1690 aa	Predicted RBP	13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	CHD9	Q3L8U1	2897 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	BRD1	O95696	1058 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	UBA7	P41226	1012 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	NAMPT	P43490	491 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	CLLU1OS	Q5K130	101 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	SPOUT1	Q5T280	376 aa	Known RBP	13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	FAM173B	Q6P4H8	233 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	NOTUM	Q6P988	496 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	KCNK18	Q7Z418	384 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	CABP7	Q86V35	215 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	ZBTB8OS	Q8IWT0	167 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	P2RX5	Q93086	422 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	PGBD4	Q96DM1	585 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	CCDC51	Q96ER9	411 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	CASD1	Q96PB1	797 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	C2orf40	Q9H1Z8	148 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	AAAS	Q9NRG9	546 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	RNF19A	Q9NV58	838 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	PCDHB2	Q9Y5E7	798 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	CLIC4	Q9Y696	253 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	TTC3	P53804	2025 aa		13.22	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	ZNF623	O75123	536 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	LAG3	P18627	525 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	PTPA	Q15257	358 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	SKIV2L	Q15477	1246 aa	Known RBP	13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	AMHR2	Q16671	573 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	CSPP1	Q1MSJ5	1256 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	TMEM119	Q4V9L6	283 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	TIGD5	Q53EQ6	642 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	GLB1L	Q6UWU2	654 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	RASSF8	Q8NHQ8	419 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	DEPTOR	Q8TB45	409 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	HELQ	Q8TDG4	1101 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	BSND	Q8WZ55	320 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	CALML4	Q96GE6	196 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	IFT74	Q96LB3	600 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	PRIMPOL	Q96LW4	560 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	DRC1	Q96MC2	740 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	ZNF396	Q96N95	335 aa	Predicted RBP	13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	PNMA5	Q96PV4	448 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	TIPIN	Q9BVW5	301 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	MRPL9	Q9BYD2	267 aa	Known RBP	13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	LMAN2L	Q9H0V9	348 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	TYW1	Q9NV66	732 aa	Known RBP	13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	PCDHB12	Q9Y5F1	795 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	EVPL	Q92817	2033 aa		13.21	□□□□□ -0.29
ARFGAP1-223	ENST00000550188	GRM6	O15303	877 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	F13A1	P00488	732 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	SSB	P05455	408 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	DDIT3	P35638	169 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	GRIN1	Q05586	938 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	MAPK6	Q16659	721 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	UBXN11	Q5T124	520 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	RINT1	Q6NUQ1	792 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PPP4R3CP	Q6ZMV5	832 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	C1orf186	Q6ZWK4	172 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	SYT2	Q8N9I0	419 aa	Predicted RBP	13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	KLHL23	Q8NBE8	558 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	COLGALT1	Q8NBJ5	622 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	CNNM3	Q8NE01	707 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	CPB2	Q96IY4	423 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PLIN2	Q99541	437 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	RUSC1	Q9BVN2	902 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	CSRNP2	Q9H175	543 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	CWH43	Q9H720	699 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	KCND2	Q9NZV8	630 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	THEG	Q9P2T0	379 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	CFAP45	Q9UL16	551 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	PLAGL2	Q9UPG8	496 aa		13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.2	□□□□□ -0.3
ARFGAP1-223	ENST00000550188	CNTNAP2	Q9UHC6	1331 aa		13.19	□□□□□ -0.3

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