RNA–Protein interactions for RNA: ENST00000549996.5

NR1H4-207, Transcript of nuclear receptor subfamily 1 group H member 4, humanhuman

TSL 1 (best) BASIC

Gene NR1H4, Length 1,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4-207ENST00000549996 DNM3Q9UQ16 869 aa11.66□□□□□ -0.54
NR1H4-207ENST00000549996 SIP14410 1827 aa11.66□□□□□ -0.54
NR1H4-207ENST00000549996 MICAL3Q7RTP6 2002 aa11.66□□□□□ -0.54
NR1H4-207ENST00000549996 EVPLQ92817 2033 aa11.66□□□□□ -0.54
NR1H4-207ENST00000549996 LRRIQ4A6NIV6 560 aa11.65□□□□□ -0.54
NR1H4-207ENST00000549996 INO80B-WBP1J3KQ70 363 aa11.65□□□□□ -0.54
NR1H4-207ENST00000549996 ERLIN2O94905 339 aa11.65□□□□□ -0.54
NR1H4-207ENST00000549996 FGFR1P11362 822 aa11.65□□□□□ -0.54
NR1H4-207ENST00000549996 GLRA2P23416 452 aa11.65□□□□□ -0.54
NR1H4-207ENST00000549996 CTNNB1P35222 781 aa11.65□□□□□ -0.54
NR1H4-207ENST00000549996 ARL2P36404 184 aa11.65□□□□□ -0.54
NR1H4-207ENST00000549996 GRB10Q13322 594 aa11.65□□□□□ -0.54
NR1H4-207ENST00000549996 CAPSQ13938 189 aa11.65□□□□□ -0.54
NR1H4-207ENST00000549996 EPC2Q52LR7 807 aa11.65□□□□□ -0.54
NR1H4-207ENST00000549996 FOXD4L5Q5VV16 416 aaPredicted RBP11.65□□□□□ -0.54
NR1H4-207ENST00000549996 TMEM192Q8IY95 271 aa11.65□□□□□ -0.54
NR1H4-207ENST00000549996 CNPY4Q8N129 248 aa11.65□□□□□ -0.54
NR1H4-207ENST00000549996 FOXD4L4Q8WXT5 416 aaPredicted RBP11.65□□□□□ -0.54
NR1H4-207ENST00000549996 ZNF689Q96CS4 500 aaPredicted RBP11.65□□□□□ -0.54
NR1H4-207ENST00000549996 PLIN2Q99541 437 aa11.65□□□□□ -0.54
NR1H4-207ENST00000549996 ZSCAN16Q9H4T2 348 aaPredicted RBP11.65□□□□□ -0.54
NR1H4-207ENST00000549996 MINDY3Q9H8M7 445 aa11.65□□□□□ -0.54
NR1H4-207ENST00000549996 RC3H2Q9HBD1 1191 aaKnown RBP11.65□□□□□ -0.54
NR1H4-207ENST00000549996 CHST12Q9NRB3 414 aa11.65□□□□□ -0.54
NR1H4-207ENST00000549996 TMEM161AQ9NX61 479 aa11.65□□□□□ -0.54
NR1H4-207ENST00000549996 CLIC4Q9Y696 253 aa11.65□□□□□ -0.54
NR1H4-207ENST00000549996 MYO9BQ13459 2157 aa11.65□□□□□ -0.55
NR1H4-207ENST00000549996 TBKBP1A7MCY6 615 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 E9PMD0 336 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 SSBP05455 408 aaKnown RBP eCLIP11.64□□□□□ -0.55
NR1H4-207ENST00000549996 CYP11B2P19099 503 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 PTENP60484 403 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 FAM189BP81408 668 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 CCDC85BQ15834 202 aaPredicted RBP11.64□□□□□ -0.55
NR1H4-207ENST00000549996 SPOUT1Q5T280 376 aaKnown RBP11.64□□□□□ -0.55
NR1H4-207ENST00000549996 ECHDC2Q86YB7 292 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 CMTR2Q8IYT2 770 aaKnown RBP11.64□□□□□ -0.55
NR1H4-207ENST00000549996 ABI1Q8IZP0 508 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 CRIPAKQ8N1N5 446 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 RASSF8Q8NHQ8 419 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 AK8Q96MA6 479 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 SAMD11Q96NU1 681 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 MMTAG2Q9BU76 263 aaKnown RBP11.64□□□□□ -0.55
NR1H4-207ENST00000549996 ELAC1Q9H777 363 aaKnown RBP11.64□□□□□ -0.55
NR1H4-207ENST00000549996 AGPAT5Q9NUQ2 364 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 MRPL42Q9Y6G3 142 aaKnown RBP11.64□□□□□ -0.55
NR1H4-207ENST00000549996 PRUNE2Q8WUY3 3088 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 GBF1Q92538 1859 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 A0A0U1RQF3 1178 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 HOXA2O43364 376 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 EYA4O95677 639 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 MARCKSP29966 332 aaPredicted RBP11.64□□□□□ -0.55
NR1H4-207ENST00000549996 UBA7P41226 1012 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 NCBP1Q09161 790 aaKnown RBP11.64□□□□□ -0.55
NR1H4-207ENST00000549996 LONRF3Q496Y0 759 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 CABP7Q86V35 215 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 NT5C3AQ9H0P0 336 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 POLD4Q9HCU8 107 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 RWDD3Q9Y3V2 267 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 PTPRSQ13332 1948 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 WDR81Q562E7 1941 aa11.64□□□□□ -0.55
NR1H4-207ENST00000549996 VGLL3A8MV65 326 aa11.63□□□□□ -0.55
NR1H4-207ENST00000549996 LPXNO60711 386 aa11.63□□□□□ -0.55
NR1H4-207ENST00000549996 SKIP12755 728 aa11.63□□□□□ -0.55
NR1H4-207ENST00000549996 GRIN1Q05586 938 aa11.63□□□□□ -0.55
NR1H4-207ENST00000549996 MBTD1Q05BQ5 628 aa11.63□□□□□ -0.55
NR1H4-207ENST00000549996 GPM6BQ13491 265 aa11.63□□□□□ -0.55
NR1H4-207ENST00000549996 KCNK18Q7Z418 384 aa11.63□□□□□ -0.55
NR1H4-207ENST00000549996 ZBTB8OSQ8IWT0 167 aa11.63□□□□□ -0.55
NR1H4-207ENST00000549996 DEPTORQ8TB45 409 aa11.63□□□□□ -0.55
NR1H4-207ENST00000549996 CALML4Q96GE6 196 aa11.63□□□□□ -0.55
NR1H4-207ENST00000549996 IFT74Q96LB3 600 aa11.63□□□□□ -0.55
NR1H4-207ENST00000549996 PNMA5Q96PV4 448 aa11.63□□□□□ -0.55
NR1H4-207ENST00000549996 USP28Q96RU2 1077 aa11.63□□□□□ -0.55
NR1H4-207ENST00000549996 FAM105AQ9NUU6 356 aa11.63□□□□□ -0.55
NR1H4-207ENST00000549996 MTCH2Q9Y6C9 303 aa11.63□□□□□ -0.55
NR1H4-207ENST00000549996 TTC3P53804 2025 aa11.62□□□□□ -0.55
NR1H4-207ENST00000549996 TSPAN1O60635 241 aa11.62□□□□□ -0.55
NR1H4-207ENST00000549996 CSPG5O95196 566 aa11.62□□□□□ -0.55
NR1H4-207ENST00000549996 EOMESO95936 686 aa11.62□□□□□ -0.55
NR1H4-207ENST00000549996 LIG1P18858 919 aa11.62□□□□□ -0.55
NR1H4-207ENST00000549996 HOXA11P31270 313 aaPredicted RBP11.62□□□□□ -0.55
NR1H4-207ENST00000549996 LONP1P36776 959 aaKnown RBP11.62□□□□□ -0.55
NR1H4-207ENST00000549996 BMPR1AP36894 532 aa11.62□□□□□ -0.55
NR1H4-207ENST00000549996 RAB27AP51159 221 aa11.62□□□□□ -0.55
NR1H4-207ENST00000549996 POU5F1BQ06416 359 aa11.62□□□□□ -0.55
NR1H4-207ENST00000549996 PTPAQ15257 358 aa11.62□□□□□ -0.55
NR1H4-207ENST00000549996 PCBP1Q15365 356 aaKnown RBP eCLIP11.62□□□□□ -0.55
NR1H4-207ENST00000549996 SKIV2LQ15477 1246 aaKnown RBP11.62□□□□□ -0.55
NR1H4-207ENST00000549996 FOXD4L6Q3SYB3 417 aaPredicted RBP11.62□□□□□ -0.55
NR1H4-207ENST00000549996 FOXD4L3Q6VB84 417 aaPredicted RBP11.62□□□□□ -0.55
NR1H4-207ENST00000549996 SLC17A8Q8NDX2 589 aa11.62□□□□□ -0.55
NR1H4-207ENST00000549996 BSNDQ8WZ55 320 aa11.62□□□□□ -0.55
NR1H4-207ENST00000549996 KIFAP3Q92845 792 aa11.62□□□□□ -0.55
NR1H4-207ENST00000549996 CLP1Q92989 425 aaKnown RBP11.62□□□□□ -0.55
NR1H4-207ENST00000549996 CPB2Q96IY4 423 aa11.62□□□□□ -0.55
NR1H4-207ENST00000549996 C11orf84Q9BUA3 381 aaPredicted RBP11.62□□□□□ -0.55
NR1H4-207ENST00000549996 RUSC1Q9BVN2 902 aa11.62□□□□□ -0.55
NR1H4-207ENST00000549996 NFKBIZQ9BYH8 718 aa11.62□□□□□ -0.55
NR1H4-207ENST00000549996 TMEM117Q9H0C3 514 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms