RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.69□□□□□ -0.38
BEST3-209ENST00000548658 TMEM143Q96AN5 459 aa12.69□□□□□ -0.38
BEST3-209ENST00000548658 ZNF558Q96NG5 402 aa12.69□□□□□ -0.38
BEST3-209ENST00000548658 CWH43Q9H720 699 aa12.69□□□□□ -0.38
BEST3-209ENST00000548658 TUFT1Q9NNX1 390 aa12.69□□□□□ -0.38
BEST3-209ENST00000548658 TLR9Q9NR96 1032 aa12.69□□□□□ -0.38
BEST3-209ENST00000548658 FAM105AQ9NUU6 356 aa12.69□□□□□ -0.38
BEST3-209ENST00000548658 FNDC1Q4ZHG4 1894 aaPredicted RBP12.69□□□□□ -0.38
BEST3-209ENST00000548658 BRWD1Q9NSI6 2320 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 H3BQ06 376 aaPredicted RBP12.68□□□□□ -0.38
BEST3-209ENST00000548658 OR52Z1P0C646 297 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 MUTP22033 750 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 AXLP30530 894 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 MCM2P49736 904 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
BEST3-209ENST00000548658 HYAL1Q12794 435 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 ADAM15Q13444 863 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 KCNT2Q6UVM3 1135 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 GLB1LQ6UWU2 654 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 CNNM3Q8NE01 707 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 MRPS27Q92552 414 aaKnown RBP12.68□□□□□ -0.38
BEST3-209ENST00000548658 NECAB3Q96P71 396 aaPredicted RBP12.68□□□□□ -0.38
BEST3-209ENST00000548658 NACC1Q96RE7 527 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 CDCA3Q99618 268 aaPredicted RBP12.68□□□□□ -0.38
BEST3-209ENST00000548658 POLR3CQ9BUI4 534 aaPredicted RBP12.68□□□□□ -0.38
BEST3-209ENST00000548658 C1QTNF1Q9BXJ1 281 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 IGFLR1Q9H665 355 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 TLE6Q9H808 572 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 NGRNQ9NPE2 291 aaKnown RBP12.68□□□□□ -0.38
BEST3-209ENST00000548658 AGPAT5Q9NUQ2 364 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 SPG21Q9NZD8 308 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 PRKAG3Q9UGI9 489 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 STK24Q9Y6E0 443 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 MYO7AQ13402 2215 aa12.68□□□□□ -0.38
BEST3-209ENST00000548658 SPTBN5Q9NRC6 3674 aaKnown RBP12.67□□□□□ -0.38
BEST3-209ENST00000548658 ZBTB39O15060 712 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 ERLIN2O94905 339 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 DNAJB1P25685 340 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 U2AF2P26368 475 aaKnown RBP eCLIP12.67□□□□□ -0.38
BEST3-209ENST00000548658 LTBRP36941 435 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 TECP42680 631 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 RARRES1P49788 294 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 ZNF174Q15697 407 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 CLLU1OSQ5K130 101 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 TTC38Q5R3I4 469 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 HAUS3Q68CZ6 603 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 LRRC55Q6ZSA7 311 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 CATSPER3Q86XQ3 398 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 FAM178BQ8IXR5 827 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 EFHBQ8N7U6 833 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 HELQQ8TDG4 1101 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 NFKBIZQ9BYH8 718 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 RAB34Q9BZG1 259 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 TMEM60Q9H2L4 133 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 UBN1Q9NPG3 1134 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 RNF19AQ9NV58 838 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 KANSL3Q9P2N6 904 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 DAXXQ9UER7 740 aaPredicted RBP12.67□□□□□ -0.38
BEST3-209ENST00000548658 DBR1Q9UK59 544 aaKnown RBP12.67□□□□□ -0.38
BEST3-209ENST00000548658 PCDHB2Q9Y5E7 798 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 MUC3AQ02505 3323 aa12.67□□□□□ -0.38
BEST3-209ENST00000548658 POTEMA6NI47 508 aa12.66□□□□□ -0.38
BEST3-209ENST00000548658 LAD1O00515 517 aa12.66□□□□□ -0.38
BEST3-209ENST00000548658 WNT7AO00755 349 aa12.66□□□□□ -0.38
BEST3-209ENST00000548658 SRGAP2BP0DMP2 458 aa12.66□□□□□ -0.38
BEST3-209ENST00000548658 ATF7P17544 494 aaPredicted RBP12.66□□□□□ -0.38
BEST3-209ENST00000548658 RPA1P27694 616 aa12.66□□□□□ -0.38
BEST3-209ENST00000548658 IRS1P35568 1242 aa12.66□□□□□ -0.38
BEST3-209ENST00000548658 ARL2P36404 184 aa12.66□□□□□ -0.38
BEST3-209ENST00000548658 NDUFV1P49821 464 aa12.66□□□□□ -0.38
BEST3-209ENST00000548658 PTENP60484 403 aa12.66□□□□□ -0.38
BEST3-209ENST00000548658 PDIA5Q14554 519 aa12.66□□□□□ -0.38
BEST3-209ENST00000548658 IFNLR1Q8IU57 520 aaPredicted RBP12.66□□□□□ -0.38
BEST3-209ENST00000548658 GJD3Q8N144 294 aa12.66□□□□□ -0.38
BEST3-209ENST00000548658 MCPH1Q8NEM0 835 aa12.66□□□□□ -0.38
BEST3-209ENST00000548658 URGCPQ8TCY9 931 aa12.66□□□□□ -0.38
BEST3-209ENST00000548658 PIGOQ8TEQ8 1089 aa12.66□□□□□ -0.38
BEST3-209ENST00000548658 CCDC51Q96ER9 411 aa12.66□□□□□ -0.38
BEST3-209ENST00000548658 XPNPEP1Q9NQW7 623 aa12.66□□□□□ -0.38
BEST3-209ENST00000548658 BMP2KQ9NSY1 1161 aaPredicted RBP12.66□□□□□ -0.38
BEST3-209ENST00000548658 STK39Q9UEW8 545 aa12.66□□□□□ -0.38
BEST3-209ENST00000548658 CNTNAP2Q9UHC6 1331 aa12.65□□□□□ -0.38
BEST3-209ENST00000548658 INO80B-WBP1J3KQ70 363 aa12.65□□□□□ -0.38
BEST3-209ENST00000548658 CSPG5O95196 566 aa12.65□□□□□ -0.38
BEST3-209ENST00000548658 SPATA31C1P0DKV0 1188 aa12.65□□□□□ -0.38
BEST3-209ENST00000548658 IL9P15248 144 aa12.65□□□□□ -0.38
BEST3-209ENST00000548658 HOXA11P31270 313 aaPredicted RBP12.65□□□□□ -0.38
BEST3-209ENST00000548658 NRIP1P48552 1158 aa12.65□□□□□ -0.38
BEST3-209ENST00000548658 RNASELQ05823 741 aaKnown RBP12.65□□□□□ -0.38
BEST3-209ENST00000548658 NOMO2Q5JPE7 1267 aa12.65□□□□□ -0.38
BEST3-209ENST00000548658 NOTUMQ6P988 496 aa12.65□□□□□ -0.38
BEST3-209ENST00000548658 MRPL10Q7Z7H8 261 aaKnown RBP12.65□□□□□ -0.38
BEST3-209ENST00000548658 HACE1Q8IYU2 909 aa12.65□□□□□ -0.38
BEST3-209ENST00000548658 TMEM169Q96HH4 297 aa12.65□□□□□ -0.38
BEST3-209ENST00000548658 POP1Q99575 1024 aaKnown RBP12.65□□□□□ -0.38
BEST3-209ENST00000548658 TCF25Q9BQ70 676 aa12.65□□□□□ -0.38
BEST3-209ENST00000548658 MINDY3Q9H8M7 445 aa12.65□□□□□ -0.38
BEST3-209ENST00000548658 CD207Q9UJ71 328 aa12.65□□□□□ -0.38
BEST3-209ENST00000548658 KIAA1671Q9BY89 1806 aa12.65□□□□□ -0.39
BEST3-209ENST00000548658 FSCN2O14926 492 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms