RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 NASPP49321 788 aaPredicted RBP20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 PCBP1Q15365 356 aaKnown RBP eCLIP20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 EPC2Q52LR7 807 aa20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 SPECC1Q5M775 1068 aa20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 C1orf186Q6ZWK4 172 aa20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 ZNF598Q86UK7 904 aaKnown RBP20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 RNF169Q8NCN4 708 aa20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 FBXO22Q8NEZ5 403 aa20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 MAFAQ8NHW3 353 aaPredicted RBP20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 GDPD5Q8WTR4 605 aa20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 KIFAP3Q92845 792 aa20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 CLP1Q92989 425 aaKnown RBP20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 ZNF396Q96N95 335 aaPredicted RBP20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 CLIC6Q96NY7 704 aa20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 RNF19AQ9NV58 838 aa20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 TFIP11Q9UBB9 837 aaKnown RBP20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 MRPL42Q9Y6G3 142 aaKnown RBP20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 MORC2Q9Y6X9 1032 aaPredicted RBP20.74■□□□□ 0.91
PRPF40B-206ENST00000547764 TBKBP1A7MCY6 615 aa20.73■□□□□ 0.91
PRPF40B-206ENST00000547764 TSPAN1O60635 241 aa20.73■□□□□ 0.91
PRPF40B-206ENST00000547764 EOMESO95936 686 aa20.73■□□□□ 0.91
PRPF40B-206ENST00000547764 SSBP05455 408 aaKnown RBP eCLIP20.73■□□□□ 0.91
PRPF40B-206ENST00000547764 ATF7P17544 494 aaPredicted RBP20.73■□□□□ 0.91
PRPF40B-206ENST00000547764 KARSQ15046 597 aaKnown RBP20.73■□□□□ 0.91
PRPF40B-206ENST00000547764 AMHR2Q16671 573 aa20.73■□□□□ 0.91
PRPF40B-206ENST00000547764 CDCA2Q69YH5 1023 aaPredicted RBP20.73■□□□□ 0.91
PRPF40B-206ENST00000547764 USP49Q70CQ1 688 aa20.73■□□□□ 0.91
PRPF40B-206ENST00000547764 SYT2Q8N9I0 419 aaPredicted RBP20.73■□□□□ 0.91
PRPF40B-206ENST00000547764 EPSTI1Q96J88 318 aa20.73■□□□□ 0.91
PRPF40B-206ENST00000547764 CCSER1Q9C0I3 900 aa20.73■□□□□ 0.91
PRPF40B-206ENST00000547764 FAM105AQ9NUU6 356 aa20.73■□□□□ 0.91
PRPF40B-206ENST00000547764 PLA2G4BP0C869 781 aa20.72■□□□□ 0.91
PRPF40B-206ENST00000547764 SKIP12755 728 aa20.72■□□□□ 0.91
PRPF40B-206ENST00000547764 BMPR1AP36894 532 aa20.72■□□□□ 0.91
PRPF40B-206ENST00000547764 NAMPTP43490 491 aa20.72■□□□□ 0.91
PRPF40B-206ENST00000547764 SLC12A3P55017 1021 aa20.72■□□□□ 0.91
PRPF40B-206ENST00000547764 PPP2R5AQ15172 486 aa20.72■□□□□ 0.91
PRPF40B-206ENST00000547764 STK38Q15208 465 aa20.72■□□□□ 0.91
PRPF40B-206ENST00000547764 FOXD4L6Q3SYB3 417 aaPredicted RBP20.72■□□□□ 0.91
PRPF40B-206ENST00000547764 FOXD4L3Q6VB84 417 aaPredicted RBP20.72■□□□□ 0.91
PRPF40B-206ENST00000547764 DAW1Q8N136 415 aa20.72■□□□□ 0.91
PRPF40B-206ENST00000547764 LINC00301Q8NCQ3 95 aa20.72■□□□□ 0.91
PRPF40B-206ENST00000547764 RASSF8Q8NHQ8 419 aa20.72■□□□□ 0.91
PRPF40B-206ENST00000547764 LRRC15Q8TF66 581 aa20.72■□□□□ 0.91
PRPF40B-206ENST00000547764 IFT74Q96LB3 600 aa20.72■□□□□ 0.91
PRPF40B-206ENST00000547764 HOXA2O43364 376 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 ZNF623O75123 536 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 HIP1RO75146 1068 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 PLCG1P19174 1290 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 POU3F3P20264 500 aaPredicted RBP20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 AXLP30530 894 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 CTNNB1P35222 781 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 RAB27AP51159 221 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 NCBP1Q09161 790 aaKnown RBP20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 BECN1Q14457 450 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 CLLU1OSQ5K130 101 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 UBXN11Q5T124 520 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 ZBTB8OSQ8IWT0 167 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 KRI1Q8N9T8 703 aaKnown RBP20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 DEPTORQ8TB45 409 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 SYMPKQ92797 1274 aaKnown RBP20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 CPB2Q96IY4 423 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 CASD1Q96PB1 797 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 TMEM117Q9H0C3 514 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 C2orf40Q9H1Z8 148 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 BLOC1S4Q9NUP1 217 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 RWDD3Q9Y3V2 267 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 PCDHB2Q9Y5E7 798 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 MTCH2Q9Y6C9 303 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 TRANK1O15050 2925 aa20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 FNDC1Q4ZHG4 1894 aaPredicted RBP20.71■□□□□ 0.91
PRPF40B-206ENST00000547764 MYH15Q9Y2K3 1946 aa20.7■□□□□ 0.91
PRPF40B-206ENST00000547764 C5orf67F2Z3F1 127 aa20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 H3BNC9 293 aa20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 B4GALT5O43286 388 aa20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 GTPBP6O43824 516 aaPredicted RBP20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 ARF4P18085 180 aaPredicted RBP20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 GUCY2CP25092 1073 aa20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 MAPK7Q13164 816 aa20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 LONRF3Q496Y0 759 aa20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 NOTUMQ6P988 496 aa20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 PPP4R3CPQ6ZMV5 832 aa20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 ABI1Q8IZP0 508 aa20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 LPPQ93052 612 aa20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 KIFC3Q9BVG8 833 aa20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 TIPINQ9BVW5 301 aa20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 FZD8Q9H461 694 aa20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 DAXXQ9UER7 740 aaPredicted RBP20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 NLRC5Q86WI3 1866 aa20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 EYSQ5T1H1 3165 aa20.7■□□□□ 0.9
PRPF40B-206ENST00000547764 RALGAPA2Q2PPJ7 1873 aa20.69■□□□□ 0.9
PRPF40B-206ENST00000547764 PRRC2BQ5JSZ5 2229 aaKnown RBP20.69■□□□□ 0.9
PRPF40B-206ENST00000547764 SPTLC2O15270 562 aa20.69■□□□□ 0.9
PRPF40B-206ENST00000547764 YEATS4O95619 227 aa20.69■□□□□ 0.9
PRPF40B-206ENST00000547764 RB1P06400 928 aa20.69■□□□□ 0.9
PRPF40B-206ENST00000547764 RAD51AP2Q09MP3 1159 aa20.69■□□□□ 0.9
PRPF40B-206ENST00000547764 GPM6BQ13491 265 aa20.69■□□□□ 0.9
PRPF40B-206ENST00000547764 FAM187BQ17R55 369 aa20.69■□□□□ 0.9
PRPF40B-206ENST00000547764 HELQQ8TDG4 1101 aa20.69■□□□□ 0.9
PRPF40B-206ENST00000547764 RAD54LQ92698 747 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms