RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 TSPAN1O60635 241 aa13.1□□□□□ -0.31
RAB5C-204ENST00000547517 CSPG5O95196 566 aa13.1□□□□□ -0.31
RAB5C-204ENST00000547517 SSBP05455 408 aaKnown RBP eCLIP13.1□□□□□ -0.31
RAB5C-204ENST00000547517 MARCKSP29966 332 aaPredicted RBP13.1□□□□□ -0.31
RAB5C-204ENST00000547517 UBA7P41226 1012 aa13.1□□□□□ -0.31
RAB5C-204ENST00000547517 PTPAQ15257 358 aa13.1□□□□□ -0.31
RAB5C-204ENST00000547517 LONRF3Q496Y0 759 aa13.1□□□□□ -0.31
RAB5C-204ENST00000547517 TMEM119Q4V9L6 283 aa13.1□□□□□ -0.31
RAB5C-204ENST00000547517 HYIQ5T013 277 aa13.1□□□□□ -0.31
RAB5C-204ENST00000547517 SPOUT1Q5T280 376 aaKnown RBP13.1□□□□□ -0.31
RAB5C-204ENST00000547517 IFNLR1Q8IU57 520 aaPredicted RBP13.1□□□□□ -0.31
RAB5C-204ENST00000547517 RASSF8Q8NHQ8 419 aa13.1□□□□□ -0.31
RAB5C-204ENST00000547517 CLP1Q92989 425 aaKnown RBP13.1□□□□□ -0.31
RAB5C-204ENST00000547517 USP28Q96RU2 1077 aa13.1□□□□□ -0.31
RAB5C-204ENST00000547517 RUSC1Q9BVN2 902 aa13.1□□□□□ -0.31
RAB5C-204ENST00000547517 NT5C3AQ9H0P0 336 aa13.1□□□□□ -0.31
RAB5C-204ENST00000547517 POLD4Q9HCU8 107 aa13.1□□□□□ -0.31
RAB5C-204ENST00000547517 FAM105AQ9NUU6 356 aa13.1□□□□□ -0.31
RAB5C-204ENST00000547517 RNF19AQ9NV58 838 aa13.1□□□□□ -0.31
RAB5C-204ENST00000547517 PRUNE2Q8WUY3 3088 aa13.1□□□□□ -0.31
RAB5C-204ENST00000547517 FNDC1Q4ZHG4 1894 aaPredicted RBP13.1□□□□□ -0.31
RAB5C-204ENST00000547517 TRANK1O15050 2925 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 B4GALT5O43286 388 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 HOXA11P31270 313 aaPredicted RBP13.09□□□□□ -0.31
RAB5C-204ENST00000547517 LONP1P36776 959 aaKnown RBP13.09□□□□□ -0.31
RAB5C-204ENST00000547517 BMPR1AP36894 532 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 RAB27AP51159 221 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 POU5F1BQ06416 359 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 GPM6BQ13491 265 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 CLLU1OSQ5K130 101 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 SPECC1Q5M775 1068 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 CDCA2Q69YH5 1023 aaPredicted RBP13.09□□□□□ -0.31
RAB5C-204ENST00000547517 ZNF598Q86UK7 904 aaKnown RBP13.09□□□□□ -0.31
RAB5C-204ENST00000547517 ZBTB8OSQ8IWT0 167 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 LRRC43Q8N309 656 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 DEPTORQ8TB45 409 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 HELQQ8TDG4 1101 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 KIFAP3Q92845 792 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 LPPQ93052 612 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 CALML4Q96GE6 196 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 CPB2Q96IY4 423 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 C11orf84Q9BUA3 381 aaPredicted RBP13.09□□□□□ -0.31
RAB5C-204ENST00000547517 KIFC3Q9BVG8 833 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 NFKBIZQ9BYH8 718 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 TMEM117Q9H0C3 514 aa13.09□□□□□ -0.31
RAB5C-204ENST00000547517 FBXO2Q9UK22 296 aaPredicted RBP13.09□□□□□ -0.31
RAB5C-204ENST00000547517 C5orf67F2Z3F1 127 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 H3BNC9 293 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 HIP1RO75146 1068 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 EOMESO95936 686 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 ZSCAN22P10073 491 aaPredicted RBP13.08□□□□□ -0.32
RAB5C-204ENST00000547517 SKIP12755 728 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 LIG1P18858 919 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 NAMPTP43490 491 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 NCBP1Q09161 790 aaKnown RBP13.08□□□□□ -0.32
RAB5C-204ENST00000547517 PKP1Q13835 747 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 KARSQ15046 597 aaKnown RBP13.08□□□□□ -0.32
RAB5C-204ENST00000547517 PPP2R5AQ15172 486 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 PCBP1Q15365 356 aaKnown RBP eCLIP13.08□□□□□ -0.32
RAB5C-204ENST00000547517 SKIV2LQ15477 1246 aaKnown RBP13.08□□□□□ -0.32
RAB5C-204ENST00000547517 AMHR2Q16671 573 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 FOXD4L6Q3SYB3 417 aaPredicted RBP13.08□□□□□ -0.32
RAB5C-204ENST00000547517 RINT1Q6NUQ1 792 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 NOTUMQ6P988 496 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 FOXD4L3Q6VB84 417 aaPredicted RBP13.08□□□□□ -0.32
RAB5C-204ENST00000547517 IFT74Q96LB3 600 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 CASD1Q96PB1 797 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 TRAIPQ9BWF2 469 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 CSRNP2Q9H175 543 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 C2orf40Q9H1Z8 148 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 PCDHB2Q9Y5E7 798 aa13.08□□□□□ -0.32
RAB5C-204ENST00000547517 MEIS3P2A8K0S8 358 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 SLC26A4O43511 780 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 F13A1P00488 732 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 PLA2G4BP0C869 781 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 ARF4P18085 180 aaPredicted RBP13.07□□□□□ -0.32
RAB5C-204ENST00000547517 PLCG1P19174 1290 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 POU3F3P20264 500 aaPredicted RBP13.07□□□□□ -0.32
RAB5C-204ENST00000547517 AXLP30530 894 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 SLC12A3P55017 1021 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 RAD51AP2Q09MP3 1159 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 DMP1Q13316 513 aaPredicted RBP13.07□□□□□ -0.32
RAB5C-204ENST00000547517 STK38Q15208 465 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 PTPROQ16827 1216 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 TMEM132AQ24JP5 1023 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 UBXN11Q5T124 520 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.07□□□□□ -0.32
RAB5C-204ENST00000547517 DAW1Q8N136 415 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 SYT2Q8N9I0 419 aaPredicted RBP13.07□□□□□ -0.32
RAB5C-204ENST00000547517 LRRC15Q8TF66 581 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 CCDC51Q96ER9 411 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 DRC1Q96MC2 740 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 CLIC6Q96NY7 704 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 PLVAPQ9BX97 442 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 EIF2AQ9BY44 585 aaKnown RBP13.07□□□□□ -0.32
RAB5C-204ENST00000547517 PRDM6Q9NQX0 595 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 TYW1Q9NV66 732 aaKnown RBP13.07□□□□□ -0.32
RAB5C-204ENST00000547517 INPP5FQ9Y2H2 1132 aa13.07□□□□□ -0.32
RAB5C-204ENST00000547517 PRRC2BQ5JSZ5 2229 aaKnown RBP13.07□□□□□ -0.32
RAB5C-204ENST00000547517 REV3LO60673 3130 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms