RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 SPATA31C1P0DKV0 1188 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 ARP10275 920 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 HOXD8P13378 290 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-211ENST00000546304 CST5P28325 142 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-211ENST00000546304 MCM7P33993 719 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 DDIT3P35638 169 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 CPT1AP50416 773 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 TOB1P50616 345 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-211ENST00000546304 GPLD1P80108 840 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 SP2Q02086 613 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 SP4Q02446 784 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 CALCRLQ16602 461 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 FSCN1Q16658 493 aaKnown RBP7.14□□□□□ -1.27
PRKDC-211ENST00000546304 CELF3Q5SZQ8 465 aaKnown RBP7.14□□□□□ -1.27
PRKDC-211ENST00000546304 LRCH2Q5VUJ6 765 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 IQSEC1Q6DN90 963 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 C8orf86Q6ZUL3 223 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 GIMAP8Q8ND71 665 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-211ENST00000546304 PPTC7Q8NI37 304 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 FOXD4L4Q8WXT5 416 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-211ENST00000546304 SDF4Q9BRK5 362 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 ZNF577Q9BSK1 485 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 AP5M1Q9H0R1 490 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 ZSCAN16Q9H4T2 348 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-211ENST00000546304 SPC25Q9HBM1 224 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 KCNMB3Q9NPA1 279 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 SEPT3Q9UH03 358 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 TCEAL9Q9UHQ7 104 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 OGDHLQ9ULD0 1010 aa7.14□□□□□ -1.27
PRKDC-211ENST00000546304 TNRC18O15417 2968 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-211ENST00000546304 TANC1Q9C0D5 1861 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 ELP1O95163 1332 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 ZBTB42B2RXF5 422 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 KBTBD13C9JR72 458 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 DDX39AO00148 427 aaKnown RBP7.13□□□□□ -1.27
PRKDC-211ENST00000546304 DNM1LO00429 736 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 TBX3O15119 743 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 CTAGE5O15320 804 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 GAS7O60861 476 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 ATP9AO75110 1047 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 MMP3P08254 477 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 OR52Z1P0C646 297 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 GJA8P48165 433 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 NRLP54845 237 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 GJA9P57773 515 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 LRRC41Q15345 812 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 PSAPL1Q6NUJ1 521 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 FAM173BQ6P4H8 233 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 CYFIP1Q7L576 1253 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 RNF180Q86T96 592 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 FAM35AQ86V20 835 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 DHX37Q8IY37 1157 aaKnown RBP7.13□□□□□ -1.27
PRKDC-211ENST00000546304 SLFN12Q8IYM2 578 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 AFG1LQ8WV93 481 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 PIK3R5Q8WYR1 880 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 SLC5A5Q92911 643 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 GJA10Q969M2 543 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 SPATA33Q96N06 139 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 UIMC1Q96RL1 719 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 RIT2Q99578 217 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 FTOQ9C0B1 505 aaKnown RBP eCLIP7.13□□□□□ -1.27
PRKDC-211ENST00000546304 MLXIPQ9HAP2 919 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 FRRS1LQ9P0K9 344 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 SLC9A2Q9UBY0 812 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 VAV3Q9UKW4 847 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 Q9Y3F1 56 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 PCDHB6Q9Y5E3 794 aa7.13□□□□□ -1.27
PRKDC-211ENST00000546304 TRIP12Q14669 1992 aaPredicted RBP7.13□□□□□ -1.27
PRKDC-211ENST00000546304 EMSYQ7Z589 1322 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 IGSF9BQ9UPX0 1349 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 WDR64B1ANS9 1081 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 LAD1O00515 517 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 DHX15O43143 795 aaKnown RBP7.12□□□□□ -1.27
PRKDC-211ENST00000546304 DYNC1LI2O43237 492 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-211ENST00000546304 CHMP2AO43633 222 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 MARCH6O60337 910 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 PSMD10O75832 226 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 SGPL1O95470 568 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 BMP15O95972 392 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 CCNE2O96020 404 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 ZNF286BP0CG31 522 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 SOX10P56693 466 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 ACTR2P61160 394 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 NKX3-2P78367 333 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 NUCB2P80303 420 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 ATP2C1P98194 919 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-211ENST00000546304 BEX3Q00994 111 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 PPP2R5CQ13362 524 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 TRIP4Q15650 581 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-211ENST00000546304 ZNF174Q15697 407 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 DGKDQ16760 1214 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 HSDL1Q3SXM5 330 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 BRDTQ58F21 947 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-211ENST00000546304 PRRT3Q5FWE3 981 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 ZNF746Q6NUN9 644 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-211ENST00000546304 CD163Q86VB7 1156 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 SMAP1Q8IYB5 467 aaPredicted RBP7.12□□□□□ -1.27
PRKDC-211ENST00000546304 ARRDC4Q8NCT1 418 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 KLHDC9Q8NEP7 349 aa7.12□□□□□ -1.27
PRKDC-211ENST00000546304 HELQQ8TDG4 1101 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms