RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 AKAP14Q86UN6 197 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 GPIHBP1Q8IV16 184 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 PASD1Q8IV76 773 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 SULF1Q8IWU6 871 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 TRIM22Q8IYM9 498 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 FUKQ8N0W3 1084 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 CADM3Q8N126 398 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 ABTB2Q8N961 1025 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 SLC9A6Q92581 669 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 WNT2BQ93097 391 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 LENG1Q96BZ8 264 aaPredicted RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 RRP36Q96EU6 259 aaKnown RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 NUDCD1Q96RS6 583 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 NUSAP1Q9BXS6 441 aaKnown RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 CDH19Q9H159 772 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 RAD21L1Q9H4I0 556 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 EHD1Q9H4M9 534 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 TRPC7Q9HCX4 862 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 TIMMDC1Q9NPL8 285 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 IARS2Q9NSE4 1012 aaKnown RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 RHBDL2Q9NX52 303 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 GMIPQ9P107 970 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 CTTNBP2NLQ9P2B4 639 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 ARHGAP28Q9P2N2 729 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 MTRRQ9UBK8 725 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 MAPRE3Q9UPY8 281 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 SNCAIPQ9Y6H5 919 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 NUMBLQ9Y6R0 609 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 CD109Q6YHK3 1445 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 MAGI3Q5TCQ9 1506 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 C1orf232A0A0U1RR37 186 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 MAGEB16A2A368 324 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 BECN2A8MW95 431 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 B8ZZF3 427 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 K7ELQ4 463 aaPredicted RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 MYO1FO00160 1098 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 WASLO00401 505 aaPredicted RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 VWA5AO00534 786 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 N4BP3O15049 544 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 HOXC11O43248 304 aaPredicted RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 ACSL4O60488 711 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 PRMT3O60678 531 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 GMNNO75496 209 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 CRTAPO75718 401 aaPredicted RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 ALDH1L1O75891 902 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 FGF18O76093 207 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 S100A9P06702 114 aaKnown RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 PRKAR1AP10644 381 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 ATF6P18850 670 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 CALB2P22676 271 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 LSP1P33241 339 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 LONP1P36776 959 aaKnown RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 EPHB1P54762 984 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 EIF4A1P60842 406 aaKnown RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 POLR2GP62487 172 aaKnown RBP eCLIP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 PLOD1Q02809 727 aaPredicted RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 XRCC4Q13426 336 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 UBE3CQ15386 1083 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 NFIL3Q16649 462 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 LONRF2Q1L5Z9 754 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 TDRD12Q587J7 1177 aaKnown RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 TJAP1Q5JTD0 557 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 FAM83BQ5T0W9 1011 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 C9orf131Q5VYM1 1079 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 ZMYM4Q5VZL5 1548 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 METTL2BQ6P1Q9 378 aaKnown RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 FOXR1Q6PIV2 292 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 THSD4Q6ZMP0 1018 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 ARHGAP36Q6ZRI8 547 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 FAM196AQ6ZSG2 479 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 CAPN12Q6ZSI9 719 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 PLEKHM3Q6ZWE6 761 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 METTL3Q86U44 580 aaKnown RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 PNMA8AQ86V59 439 aaPredicted RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 GATAD2AQ86YP4 633 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 PLEKHH2Q8IVE3 1493 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 SCUBE1Q8IWY4 988 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 DNAAF3Q8N9W5 541 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 TTC13Q8NBP0 860 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 PPFIBP2Q8ND30 876 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 CDC26Q8NHZ8 85 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 BCAS4Q8TDM0 211 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 MADDQ8WXG6 1647 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 CTTNBP2Q8WZ74 1663 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 TMA16Q96EY4 203 aaKnown RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 HS6ST2Q96MM7 605 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 RPRD1AQ96P16 312 aaPredicted RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 BPIFA3Q9BQP9 254 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 SDF4Q9BRK5 362 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 MRPL1Q9BYD6 325 aaKnown RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 B3GNT4Q9C0J1 378 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 LMAN2LQ9H0V9 348 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 WNT5BQ9H1J7 359 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 ESF1Q9H501 851 aaKnown RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 GID8Q9NWU2 228 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 MRPL39Q9NYK5 338 aaKnown RBP5.51□□□□□ -1.53
UBE4A-203ENST00000545354 BTBD7Q9P203 1132 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 CNTN3Q9P232 1028 aa5.51□□□□□ -1.53
UBE4A-203ENST00000545354 DBF4Q9UBU7 674 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms