RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 CATIPQ7Z7H3 387 aa8.28□□□□□ -1.08
COPA-207ENST00000545284 METTL13Q8N6R0 699 aa8.28□□□□□ -1.08
COPA-207ENST00000545284 LINC01465Q8N7H1 131 aa8.28□□□□□ -1.08
COPA-207ENST00000545284 RNF169Q8NCN4 708 aa8.28□□□□□ -1.08
COPA-207ENST00000545284 TMEM175Q9BSA9 504 aa8.28□□□□□ -1.08
COPA-207ENST00000545284 MYL10Q9BUA6 226 aa8.28□□□□□ -1.08
COPA-207ENST00000545284 PRKD2Q9BZL6 878 aa8.28□□□□□ -1.08
COPA-207ENST00000545284 NT5C3AQ9H0P0 336 aa8.28□□□□□ -1.08
COPA-207ENST00000545284 NRDE2Q9H7Z3 1164 aa8.28□□□□□ -1.08
COPA-207ENST00000545284 RXFP1Q9HBX9 757 aa8.28□□□□□ -1.08
COPA-207ENST00000545284 LTB4R2Q9NPC1 389 aa8.28□□□□□ -1.08
COPA-207ENST00000545284 ZNF302Q9NR11 478 aa8.28□□□□□ -1.08
COPA-207ENST00000545284 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.28□□□□□ -1.08
COPA-207ENST00000545284 SEMA4GQ9NTN9 838 aa8.28□□□□□ -1.08
COPA-207ENST00000545284 MAFBQ9Y5Q3 323 aaPredicted RBP8.28□□□□□ -1.08
COPA-207ENST00000545284 HIP1O00291 1037 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 MEIS1O00470 390 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 FOSP01100 380 aaPredicted RBP8.27□□□□□ -1.09
COPA-207ENST00000545284 VTNP04004 478 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 URODP06132 367 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 RNASELQ05823 741 aaKnown RBP8.27□□□□□ -1.09
COPA-207ENST00000545284 ADCY1Q08828 1119 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 SPEM2Q0P670 501 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 SNW1Q13573 536 aaKnown RBP8.27□□□□□ -1.09
COPA-207ENST00000545284 UBXN2BQ14CS0 331 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 NIPA1Q7RTP0 329 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 SMAP1Q8IYB5 467 aaPredicted RBP8.27□□□□□ -1.09
COPA-207ENST00000545284 ZNF707Q96C28 371 aaPredicted RBP8.27□□□□□ -1.09
COPA-207ENST00000545284 PGBD4Q96DM1 585 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 FAM167AQ96KS9 214 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 INO80BQ9C086 356 aaPredicted RBP8.27□□□□□ -1.09
COPA-207ENST00000545284 PIDD1Q9HB75 910 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 AGO4Q9HCK5 861 aaKnown RBP8.27□□□□□ -1.09
COPA-207ENST00000545284 PKD2L1Q9P0L9 805 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 CDH7Q9ULB5 785 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 PCDHA6Q9UN73 950 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 AKT3Q9Y243 479 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 FAN1Q9Y2M0 1017 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 PCDHA8Q9Y5H6 950 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.27□□□□□ -1.09
COPA-207ENST00000545284 DENND4AQ7Z401 1863 aa8.27□□□□□ -1.09
COPA-207ENST00000545284 IFIT3O14879 490 aaKnown RBP8.26□□□□□ -1.09
COPA-207ENST00000545284 TM4SF5O14894 197 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 TEX28O15482 410 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 GAS2O43903 313 aaKnown RBP8.26□□□□□ -1.09
COPA-207ENST00000545284 LRRN2O75325 713 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 OFD1O75665 1012 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 TDGF1P13385 188 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 SDSP20132 328 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 SLC11A1P49279 550 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 GPC3P51654 580 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 CREMQ03060 361 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 ITGB3BPQ13352 177 aaPredicted RBP8.26□□□□□ -1.09
COPA-207ENST00000545284 N4BP2L1Q5TBK1 243 aaPredicted RBP8.26□□□□□ -1.09
COPA-207ENST00000545284 SWSAP1Q6NVH7 229 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 EFCAB12Q6NXP0 572 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 RTL10Q7L3V2 364 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 CCDC60Q8IWA6 550 aaPredicted RBP8.26□□□□□ -1.09
COPA-207ENST00000545284 CKAP2LQ8IYA6 745 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 CTCFLQ8NI51 663 aaPredicted RBP8.26□□□□□ -1.09
COPA-207ENST00000545284 FEZF2Q8TBJ5 459 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 URGCPQ8TCY9 931 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 BCL7CQ8WUZ0 217 aaPredicted RBP8.26□□□□□ -1.09
COPA-207ENST00000545284 FAM193BQ96PV7 902 aaPredicted RBP8.26□□□□□ -1.09
COPA-207ENST00000545284 MTA3Q9BTC8 594 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 VN1R3Q9BXE9 311 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 LY9Q9HBG7 655 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 UBN1Q9NPG3 1134 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 TBC1D22BQ9NU19 505 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 FNIP2Q9P278 1114 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 RALYQ9UKM9 306 aaKnown RBP8.26□□□□□ -1.09
COPA-207ENST00000545284 MTF2Q9Y483 593 aaPredicted RBP8.26□□□□□ -1.09
COPA-207ENST00000545284 LOXHD1Q8IVV2 1947 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 CACNA1IQ9P0X4 2223 aa8.26□□□□□ -1.09
COPA-207ENST00000545284 MAN2B1O00754 1011 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 RFPL2O75678 378 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 DDAH1O94760 285 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 EFEMP2O95967 443 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 CCNE2O96020 404 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 POU2F2P09086 479 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 HNRNPA1P09651 372 aaKnown RBP eCLIP8.25□□□□□ -1.09
COPA-207ENST00000545284 ATP4AP20648 1035 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 SFPQP23246 707 aaKnown RBP eCLIP8.25□□□□□ -1.09
COPA-207ENST00000545284 FSHRP23945 695 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 HOXA9P31269 272 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 GLUD2P49448 558 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 CCR3P51677 355 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 AK2P54819 239 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 HNRNPUQ00839 825 aaKnown RBP eCLIP8.25□□□□□ -1.09
COPA-207ENST00000545284 DSG1Q02413 1049 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 TWF2Q6IBS0 349 aaKnown RBP8.25□□□□□ -1.09
COPA-207ENST00000545284 ZNF746Q6NUN9 644 aaPredicted RBP8.25□□□□□ -1.09
COPA-207ENST00000545284 LILRA6Q6PI73 481 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 PARM1Q6UWI2 310 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 RNF168Q8IYW5 571 aaPredicted RBP8.25□□□□□ -1.09
COPA-207ENST00000545284 FGF14Q92915 247 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 HERC2P3Q9BVR0 1158 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 GCOM2Q9BZD3 368 aaPredicted RBP8.25□□□□□ -1.09
COPA-207ENST00000545284 GLT8D2Q9H1C3 349 aa8.25□□□□□ -1.09
COPA-207ENST00000545284 CHRDQ9H2X0 955 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms