RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 CDC42EP1Q00587 391 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 KRT17Q04695 432 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 TBC1D8BQ0IIM8 1120 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 LETM2Q2VYF4 491 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 XKR3Q5GH77 459 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 RARS2Q5T160 578 aaKnown RBP18.2■□□□□ 0.5
DDX55-212ENST00000544738 PPP4R3AQ6IN85 833 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 KANK3Q6NY19 840 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 B3GNT9Q6UX72 402 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 NEK8Q86SG6 692 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 CCDC105Q8IYK2 499 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 ZDHHC14Q8IZN3 488 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 LINC01465Q8N7H1 131 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 DTWD2Q8NBA8 298 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 GJA10Q969M2 543 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 FAM20AQ96MK3 541 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 HINFPQ9BQA5 517 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 ATP6V0A4Q9HBG4 840 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 ORC3Q9UBD5 711 aaPredicted RBP18.2■□□□□ 0.5
DDX55-212ENST00000544738 DBR1Q9UK59 544 aaKnown RBP18.2■□□□□ 0.5
DDX55-212ENST00000544738 HCFC2Q9Y5Z7 792 aa18.2■□□□□ 0.5
DDX55-212ENST00000544738 STK25O00506 426 aa18.19■□□□□ 0.5
DDX55-212ENST00000544738 CENPBP07199 599 aaPredicted RBP18.19■□□□□ 0.5
DDX55-212ENST00000544738 NPR3P17342 541 aa18.19■□□□□ 0.5
DDX55-212ENST00000544738 PBX3P40426 434 aa18.19■□□□□ 0.5
DDX55-212ENST00000544738 PUM1Q14671 1186 aaKnown RBP eCLIP18.19■□□□□ 0.5
DDX55-212ENST00000544738 UGCGQ16739 394 aa18.19■□□□□ 0.5
DDX55-212ENST00000544738 ATAT1Q5SQI0 421 aa18.19■□□□□ 0.5
DDX55-212ENST00000544738 FAM228AQ86W67 206 aa18.19■□□□□ 0.5
DDX55-212ENST00000544738 PLCD3Q8N3E9 789 aa18.19■□□□□ 0.5
DDX55-212ENST00000544738 LRRC71Q8N4P6 559 aa18.19■□□□□ 0.5
DDX55-212ENST00000544738 CNTNAP3BQ96NU0 1288 aa18.19■□□□□ 0.5
DDX55-212ENST00000544738 PPP1R16BQ96T49 567 aa18.19■□□□□ 0.5
DDX55-212ENST00000544738 NIFKQ9BYG3 293 aaKnown RBP18.19■□□□□ 0.5
DDX55-212ENST00000544738 CNTNAP3Q9BZ76 1288 aa18.19■□□□□ 0.5
DDX55-212ENST00000544738 FBXL21Q9UKT6 434 aa18.19■□□□□ 0.5
DDX55-212ENST00000544738 CEP250Q9BV73 2442 aa18.18■□□□□ 0.5
DDX55-212ENST00000544738 WDR81Q562E7 1941 aa18.18■□□□□ 0.5
DDX55-212ENST00000544738 C9IYK1 514 aa18.18■□□□□ 0.5
DDX55-212ENST00000544738 TBX3O15119 743 aa18.18■□□□□ 0.5
DDX55-212ENST00000544738 EIF4BP23588 611 aaKnown RBP18.18■□□□□ 0.5
DDX55-212ENST00000544738 DNM2P50570 870 aa18.18■□□□□ 0.5
DDX55-212ENST00000544738 TARBP2Q15633 366 aaKnown RBP18.18■□□□□ 0.5
DDX55-212ENST00000544738 KCNT2Q6UVM3 1135 aa18.18■□□□□ 0.5
DDX55-212ENST00000544738 MRPL43Q8N983 215 aaKnown RBP18.18■□□□□ 0.5
DDX55-212ENST00000544738 RTP3Q9BQQ7 232 aa18.18■□□□□ 0.5
DDX55-212ENST00000544738 ADAMTS10Q9H324 1103 aa18.18■□□□□ 0.5
DDX55-212ENST00000544738 ELAC1Q9H777 363 aaKnown RBP18.18■□□□□ 0.5
DDX55-212ENST00000544738 BRMS1Q9HCU9 246 aa18.18■□□□□ 0.5
DDX55-212ENST00000544738 TMEM161AQ9NX61 479 aa18.18■□□□□ 0.5
DDX55-212ENST00000544738 R4GN57 208 aa18.18■□□□□ 0.5
DDX55-212ENST00000544738 SLC37A4O43826 429 aa18.17■□□□□ 0.5
DDX55-212ENST00000544738 DKC1O60832 514 aaKnown RBP eCLIP18.17■□□□□ 0.55e-33■■■■■ 32.3
DDX55-212ENST00000544738 CLASP2O75122 1294 aaKnown RBP18.17■□□□□ 0.5
DDX55-212ENST00000544738 CTDNEP1O95476 244 aa18.17■□□□□ 0.5
DDX55-212ENST00000544738 ZSCAN20P17040 1043 aaPredicted RBP18.17■□□□□ 0.5
DDX55-212ENST00000544738 NEK4P51957 841 aa18.17■□□□□ 0.5
DDX55-212ENST00000544738 PSMC5P62195 406 aa18.17■□□□□ 0.5
DDX55-212ENST00000544738 FAM189BP81408 668 aa18.17■□□□□ 0.5
DDX55-212ENST00000544738 PPP2R5CQ13362 524 aa18.17■□□□□ 0.5
DDX55-212ENST00000544738 SMC1AQ14683 1233 aaKnown RBP18.17■□□□□ 0.5
DDX55-212ENST00000544738 LRRC55Q6ZSA7 311 aa18.17■□□□□ 0.5
DDX55-212ENST00000544738 PIK3AP1Q6ZUJ8 805 aa18.17■□□□□ 0.5
DDX55-212ENST00000544738 TMEM87AQ8NBN3 555 aa18.17■□□□□ 0.5
DDX55-212ENST00000544738 ZNF558Q96NG5 402 aa18.17■□□□□ 0.5
DDX55-212ENST00000544738 SCLT1Q96NL6 688 aa18.17■□□□□ 0.5
DDX55-212ENST00000544738 SEMA4AQ9H3S1 761 aa18.17■□□□□ 0.5
DDX55-212ENST00000544738 KCNMB3Q9NPA1 279 aa18.17■□□□□ 0.5
DDX55-212ENST00000544738 CYP26B1Q9NR63 512 aa18.17■□□□□ 0.5
DDX55-212ENST00000544738 SPG21Q9NZD8 308 aa18.17■□□□□ 0.5
DDX55-212ENST00000544738 SEPT9Q9UHD8 586 aaPredicted RBP18.17■□□□□ 0.5
DDX55-212ENST00000544738 SPTBN2O15020 2390 aa18.16■□□□□ 0.5
DDX55-212ENST00000544738 C2orf71A6NGG8 1288 aa18.16■□□□□ 0.5
DDX55-212ENST00000544738 DDX11L8A8MPP1 907 aa18.16■□□□□ 0.5
DDX55-212ENST00000544738 MARCH6O60337 910 aa18.16■□□□□ 0.5
DDX55-212ENST00000544738 CCNT1O60563 726 aaKnown RBP18.16■□□□□ 0.5
DDX55-212ENST00000544738 CXCL14O95715 111 aa18.16■□□□□ 0.5
DDX55-212ENST00000544738 GPC3P51654 580 aa18.16■□□□□ 0.5
DDX55-212ENST00000544738 DSC3Q14574 896 aa18.16■□□□□ 0.5
DDX55-212ENST00000544738 ME3Q16798 604 aa18.16■□□□□ 0.5
DDX55-212ENST00000544738 MTERF2Q49AM1 385 aa18.16■□□□□ 0.5
DDX55-212ENST00000544738 SIX5Q8N196 739 aa18.16■□□□□ 0.5
DDX55-212ENST00000544738 GTF3C6Q969F1 213 aa18.16■□□□□ 0.5
DDX55-212ENST00000544738 JPH2Q9BR39 696 aaPredicted RBP18.16■□□□□ 0.5
DDX55-212ENST00000544738 ACACBO00763 2458 aa18.15■□□□□ 0.5
DDX55-212ENST00000544738 IGKV6-21A0A0C4DH24 114 aa18.15■□□□□ 0.5
DDX55-212ENST00000544738 HOXA2O43364 376 aa18.15■□□□□ 0.5
DDX55-212ENST00000544738 STBD1O95210 358 aa18.15■□□□□ 0.5
DDX55-212ENST00000544738 BAG4O95429 457 aaKnown RBP18.15■□□□□ 0.5
DDX55-212ENST00000544738 EOMESO95936 686 aa18.15■□□□□ 0.5
DDX55-212ENST00000544738 FDPSP14324 419 aaKnown RBP18.15■□□□□ 0.5
DDX55-212ENST00000544738 DARSP14868 501 aaKnown RBP18.15■□□□□ 0.5
DDX55-212ENST00000544738 PPM1AP35813 382 aa18.15■□□□□ 0.5
DDX55-212ENST00000544738 KRT2P35908 639 aa18.15■□□□□ 0.5
DDX55-212ENST00000544738 TDGQ13569 410 aa18.15■□□□□ 0.5
DDX55-212ENST00000544738 EXOC8Q8IYI6 725 aa18.15■□□□□ 0.5
DDX55-212ENST00000544738 NECAB1Q8N987 351 aa18.15■□□□□ 0.5
DDX55-212ENST00000544738 OXER1Q8TDS5 423 aa18.15■□□□□ 0.5
DDX55-212ENST00000544738 NLRP7Q8WX94 980 aa18.15■□□□□ 0.5
DDX55-212ENST00000544738 TMEM117Q9H0C3 514 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms