RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 ALG13Q9NP73 1137 aaKnown RBP15.48■□□□□ 0.07
VAMP1-208ENST00000544432 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.48■□□□□ 0.07
VAMP1-208ENST00000544432 PCDHB6Q9Y5E3 794 aa15.48■□□□□ 0.07
VAMP1-208ENST00000544432 FNDC1Q4ZHG4 1894 aaPredicted RBP15.48■□□□□ 0.07
VAMP1-208ENST00000544432 CARNS1A5YM72 827 aa15.47■□□□□ 0.07
VAMP1-208ENST00000544432 H3BQV1 296 aa15.47■□□□□ 0.07
VAMP1-208ENST00000544432 AXLP30530 894 aa15.47■□□□□ 0.07
VAMP1-208ENST00000544432 HOXA11P31270 313 aaPredicted RBP15.47■□□□□ 0.07
VAMP1-208ENST00000544432 SPOUT1Q5T280 376 aaKnown RBP15.47■□□□□ 0.07
VAMP1-208ENST00000544432 MCTP1Q6DN14 999 aa15.47■□□□□ 0.07
VAMP1-208ENST00000544432 LRRC55Q6ZSA7 311 aa15.47■□□□□ 0.07
VAMP1-208ENST00000544432 MRPL10Q7Z7H8 261 aaKnown RBP15.47■□□□□ 0.07
VAMP1-208ENST00000544432 LRRC43Q8N309 656 aa15.47■□□□□ 0.07
VAMP1-208ENST00000544432 COLGALT1Q8NBJ5 622 aa15.47■□□□□ 0.07
VAMP1-208ENST00000544432 PABPC5Q96DU9 382 aaKnown RBP15.47■□□□□ 0.07
VAMP1-208ENST00000544432 MRPL9Q9BYD2 267 aaKnown RBP15.47■□□□□ 0.07
VAMP1-208ENST00000544432 BMP2KQ9NSY1 1161 aaPredicted RBP15.47■□□□□ 0.07
VAMP1-208ENST00000544432 FAM105AQ9NUU6 356 aa15.47■□□□□ 0.07
VAMP1-208ENST00000544432 LRWD1Q9UFC0 647 aa15.47■□□□□ 0.07
VAMP1-208ENST00000544432 LZTS1Q9Y250 596 aa15.47■□□□□ 0.07
VAMP1-208ENST00000544432 A0A087WWV3 80 aa15.46■□□□□ 0.07
VAMP1-208ENST00000544432 GLRA2P23416 452 aa15.46■□□□□ 0.07
VAMP1-208ENST00000544432 CCT6AP40227 531 aaKnown RBP15.46■□□□□ 0.07
VAMP1-208ENST00000544432 PLCB3Q01970 1234 aa15.46■□□□□ 0.07
VAMP1-208ENST00000544432 CAPSQ13938 189 aa15.46■□□□□ 0.07
VAMP1-208ENST00000544432 LEXMQ3ZCV2 418 aa15.46■□□□□ 0.07
VAMP1-208ENST00000544432 LARP1BQ659C4 914 aaKnown RBP15.46■□□□□ 0.07
VAMP1-208ENST00000544432 ASAP3Q8TDY4 903 aa15.46■□□□□ 0.07
VAMP1-208ENST00000544432 POF1BQ8WVV4 589 aa15.46■□□□□ 0.07
VAMP1-208ENST00000544432 PGBD4Q96DM1 585 aa15.46■□□□□ 0.07
VAMP1-208ENST00000544432 CCDC51Q96ER9 411 aa15.46■□□□□ 0.07
VAMP1-208ENST00000544432 BDP1A6H8Y1 2624 aa15.46■□□□□ 0.06
VAMP1-208ENST00000544432 USO1O60763 962 aaKnown RBP15.45■□□□□ 0.06
VAMP1-208ENST00000544432 FGF18O76093 207 aa15.45■□□□□ 0.06
VAMP1-208ENST00000544432 CYP11B2P19099 503 aa15.45■□□□□ 0.06
VAMP1-208ENST00000544432 DNAJB1P25685 340 aa15.45■□□□□ 0.06
VAMP1-208ENST00000544432 PPM1AP35813 382 aa15.45■□□□□ 0.06
VAMP1-208ENST00000544432 NCBP1Q09161 790 aaKnown RBP15.45■□□□□ 0.06
VAMP1-208ENST00000544432 CTC1Q2NKJ3 1217 aa15.45■□□□□ 0.06
VAMP1-208ENST00000544432 PDE12Q6L8Q7 609 aaKnown RBP15.45■□□□□ 0.06
VAMP1-208ENST00000544432 POTEGQ6S5H5 508 aa15.45■□□□□ 0.06
VAMP1-208ENST00000544432 KCNT2Q6UVM3 1135 aa15.45■□□□□ 0.06
VAMP1-208ENST00000544432 DTHD1Q6ZMT9 781 aa15.45■□□□□ 0.06
VAMP1-208ENST00000544432 RNF169Q8NCN4 708 aa15.45■□□□□ 0.06
VAMP1-208ENST00000544432 CNNM3Q8NE01 707 aa15.45■□□□□ 0.06
VAMP1-208ENST00000544432 HELQQ8TDG4 1101 aa15.45■□□□□ 0.06
VAMP1-208ENST00000544432 ADAMTS19Q8TE59 1207 aa15.45■□□□□ 0.06
VAMP1-208ENST00000544432 PPP2R3CQ969Q6 453 aa15.45■□□□□ 0.06
VAMP1-208ENST00000544432 ZNF558Q96NG5 402 aa15.45■□□□□ 0.06
VAMP1-208ENST00000544432 POLR3FQ9H1D9 316 aaPredicted RBP15.45■□□□□ 0.06
VAMP1-208ENST00000544432 PCDHB2Q9Y5E7 798 aa15.45■□□□□ 0.06
VAMP1-208ENST00000544432 ARID2Q68CP9 1835 aa15.45■□□□□ 0.06
VAMP1-208ENST00000544432 ARHGEF35A5YM69 484 aa15.44■□□□□ 0.06
VAMP1-208ENST00000544432 ERLIN2O94905 339 aa15.44■□□□□ 0.06
VAMP1-208ENST00000544432 KCNQ1P51787 676 aa15.44■□□□□ 0.06
VAMP1-208ENST00000544432 ATP2C1P98194 919 aaPredicted RBP15.44■□□□□ 0.06
VAMP1-208ENST00000544432 MBTD1Q05BQ5 628 aa15.44■□□□□ 0.06
VAMP1-208ENST00000544432 HYAL1Q12794 435 aa15.44■□□□□ 0.06
VAMP1-208ENST00000544432 IL17AQ16552 155 aa15.44■□□□□ 0.06
VAMP1-208ENST00000544432 ECM1Q16610 540 aa15.44■□□□□ 0.06
VAMP1-208ENST00000544432 PUS10Q3MIT2 529 aaKnown RBP15.44■□□□□ 0.06
VAMP1-208ENST00000544432 UBXN11Q5T124 520 aa15.44■□□□□ 0.06
VAMP1-208ENST00000544432 KRT79Q5XKE5 535 aa15.44■□□□□ 0.06
VAMP1-208ENST00000544432 ARL6IP4Q66PJ3 421 aaKnown RBP15.44■□□□□ 0.06
VAMP1-208ENST00000544432 PADI6Q6TGC4 694 aa15.44■□□□□ 0.06
VAMP1-208ENST00000544432 GLB1LQ6UWU2 654 aa15.44■□□□□ 0.06
VAMP1-208ENST00000544432 THNSL1Q8IYQ7 743 aa15.44■□□□□ 0.06
VAMP1-208ENST00000544432 KCTD17Q8N5Z5 321 aa15.44■□□□□ 0.06
VAMP1-208ENST00000544432 UHRF1Q96T88 793 aaPredicted RBP15.44■□□□□ 0.06
VAMP1-208ENST00000544432 HCSTQ9UBK5 93 aa15.44■□□□□ 0.06
VAMP1-208ENST00000544432 DAXXQ9UER7 740 aaPredicted RBP15.44■□□□□ 0.06
VAMP1-208ENST00000544432 PUF60Q9UHX1 559 aaKnown RBP15.44■□□□□ 0.06
VAMP1-208ENST00000544432 MUC3AQ02505 3323 aa15.44■□□□□ 0.06
VAMP1-208ENST00000544432 CNTNAP2Q9UHC6 1331 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 INO80B-WBP1J3KQ70 363 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 FSCN2O14926 492 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 TSPAN1O60635 241 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 OFD1O75665 1012 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 NCLP19338 710 aaKnown RBP15.43■□□□□ 0.06
VAMP1-208ENST00000544432 PDCP20941 246 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 KCNA5P22460 613 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 AMHR2Q16671 573 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 NOMO2Q5JPE7 1267 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 NOTUMQ6P988 496 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 AGMOQ6ZNB7 445 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 SNX29Q8TEQ0 813 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 MRPS27Q92552 414 aaKnown RBP15.43■□□□□ 0.06
VAMP1-208ENST00000544432 INTS4Q96HW7 963 aaKnown RBP15.43■□□□□ 0.06
VAMP1-208ENST00000544432 CSRNP2Q9H175 543 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 UBN1Q9NPG3 1134 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 TLR9Q9NR96 1032 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 SPG21Q9NZD8 308 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 KANSL3Q9P2N6 904 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 KIAA1024Q9UPX6 916 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 KIAA1671Q9BY89 1806 aa15.43■□□□□ 0.06
VAMP1-208ENST00000544432 FSD2A1L4K1 749 aa15.42■□□□□ 0.06
VAMP1-208ENST00000544432 TNFRSF10AO00220 468 aa15.42■□□□□ 0.06
VAMP1-208ENST00000544432 IRS1P35568 1242 aa15.42■□□□□ 0.06
VAMP1-208ENST00000544432 ALDH7A1P49419 539 aaKnown RBP15.42■□□□□ 0.06
VAMP1-208ENST00000544432 KRT17Q04695 432 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms