RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 ATP9AO75110 1047 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 WFS1O76024 890 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 KCNA3P22001 575 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 DNAJC3Q13217 504 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 ARHGAP27Q6ZUM4 889 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 AGGF1Q8N302 714 aaeCLIP13.62□□□□□ -0.23
SMG8-202ENST00000543872 MAIP1Q8WWC4 291 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 NT5C3AQ9H0P0 336 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 DNAAF2Q9NVR5 837 aaKnown RBP13.62□□□□□ -0.23
SMG8-202ENST00000543872 STK17AQ9UEE5 414 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 PRKAG3Q9UGI9 489 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 INTUQ9ULD6 942 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 ASAP1Q9ULH1 1129 aa13.62□□□□□ -0.23
SMG8-202ENST00000543872 DDX3YO15523 660 aaKnown RBP13.61□□□□□ -0.23
SMG8-202ENST00000543872 TDP2O95551 362 aa13.61□□□□□ -0.23
SMG8-202ENST00000543872 UBTFL6P0CB48 400 aaPredicted RBP13.61□□□□□ -0.23
SMG8-202ENST00000543872 CACNA2D1P54289 1103 aa13.61□□□□□ -0.23
SMG8-202ENST00000543872 CCDC137Q6PK04 289 aaKnown RBP13.61□□□□□ -0.23
SMG8-202ENST00000543872 BTNL9Q6UXG8 535 aa13.61□□□□□ -0.23
SMG8-202ENST00000543872 ATL2Q8NHH9 583 aa13.61□□□□□ -0.23
SMG8-202ENST00000543872 ZCRB1Q8TBF4 217 aaKnown RBP13.61□□□□□ -0.23
SMG8-202ENST00000543872 SPOCK2Q92563 424 aa13.61□□□□□ -0.23
SMG8-202ENST00000543872 DYNLL2Q96FJ2 89 aa13.61□□□□□ -0.23
SMG8-202ENST00000543872 TAOK3Q9H2K8 898 aa13.61□□□□□ -0.23
SMG8-202ENST00000543872 MCM9Q9NXL9 1143 aa13.61□□□□□ -0.23
SMG8-202ENST00000543872 IGSF9BQ9UPX0 1349 aa13.61□□□□□ -0.23
SMG8-202ENST00000543872 SCN11AQ9UI33 1791 aa13.61□□□□□ -0.23
SMG8-202ENST00000543872 PON1P27169 355 aa13.61□□□□□ -0.23
SMG8-202ENST00000543872 UBE4AQ14139 1066 aa13.61□□□□□ -0.23
SMG8-202ENST00000543872 DHX34Q14147 1143 aaKnown RBP13.61□□□□□ -0.23
SMG8-202ENST00000543872 DBN1Q16643 649 aa13.61□□□□□ -0.23
SMG8-202ENST00000543872 ZCWPW2Q504Y3 356 aa13.61□□□□□ -0.23
SMG8-202ENST00000543872 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.61□□□□□ -0.23
SMG8-202ENST00000543872 RBBP8NLQ8NC74 664 aaPredicted RBP13.61□□□□□ -0.23
SMG8-202ENST00000543872 ZFAND2BQ8WV99 257 aa13.61□□□□□ -0.23
SMG8-202ENST00000543872 MAF1Q9H063 256 aa13.61□□□□□ -0.23
SMG8-202ENST00000543872 CDC42EP4Q9H3Q1 356 aaKnown RBP13.61□□□□□ -0.23
SMG8-202ENST00000543872 KAT6BQ8WYB5 2073 aa13.61□□□□□ -0.23
SMG8-202ENST00000543872 SMAPO00193 183 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 ZCCHC18P0CG32 403 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 RARGP13631 454 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 MARCKSL1P49006 195 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 CALCOCO2Q13137 446 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 KYNUQ16719 465 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 TTC27Q6P3X3 843 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 MIGA2Q7L4E1 593 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 RBM17Q96I25 401 aaKnown RBP13.6□□□□□ -0.23
SMG8-202ENST00000543872 BRIP1Q9BX63 1249 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 C6orf50Q9HD87 102 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 EMILIN3Q9NT22 766 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 BAZ2AQ9UIF9 1905 aaKnown RBP13.6□□□□□ -0.23
SMG8-202ENST00000543872 A0A1W2PRG0 241 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 SPAG7O75391 227 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 GNA14O95837 355 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 USP17L8P0C7I0 530 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 FOXN2P32314 431 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 VPS41P49754 854 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 CTTNQ14247 550 aaKnown RBP13.6□□□□□ -0.23
SMG8-202ENST00000543872 TRIP13Q15645 432 aaPredicted RBP13.6□□□□□ -0.23
SMG8-202ENST00000543872 ECM1Q16610 540 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 SGSM1Q2NKQ1 1148 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 KHDC1Q4VXA5 237 aaKnown RBP13.6□□□□□ -0.23
SMG8-202ENST00000543872 ZC2HC1CQ53FD0 456 aaPredicted RBP13.6□□□□□ -0.23
SMG8-202ENST00000543872 FOXB2Q5VYV0 432 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 OR52E8Q6IFG1 317 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 PRELID2Q8N945 189 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 ARHGEF26Q96DR7 871 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 CEP63Q96MT8 703 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 MKNK2Q9HBH9 465 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 SLCO1B3Q9NPD5 702 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.6□□□□□ -0.23
SMG8-202ENST00000543872 KLRF2D3W0D1 207 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 E9PMD0 336 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 SLC37A4O43826 429 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 ACADSP16219 412 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 ACBD5Q5T8D3 534 aaPredicted RBP13.6□□□□□ -0.23
SMG8-202ENST00000543872 SNX30Q5VWJ9 437 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 RNF43Q68DV7 783 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 RFX8Q6ZV50 586 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 CYP4X1Q8N118 509 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 KRT35Q92764 455 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 OCEL1Q9H607 264 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 MAD2L2Q9UI95 211 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 CHKBQ9Y259 395 aa13.6□□□□□ -0.23
SMG8-202ENST00000543872 PTGIRP43119 386 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 RCN1Q15293 331 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 PPP2R5EQ16537 467 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 RFWD3Q6PCD5 774 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 SPIRE2Q8WWL2 714 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 SCG3Q8WXD2 468 aaKnown RBP13.59□□□□□ -0.23
SMG8-202ENST00000543872 PWWP2AQ96N64 755 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 ADAM33Q9BZ11 813 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 LRMDAQ9H2I8 198 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 DCP1AQ9NPI6 582 aaPredicted RBP13.59□□□□□ -0.23
SMG8-202ENST00000543872 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMG8-202ENST00000543872 CTTNBP2NLQ9P2B4 639 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 TCRBV7S2A1N4TA0A589 114 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 CREB3O43889 395 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 PHF2O75151 1096 aa13.59□□□□□ -0.23
SMG8-202ENST00000543872 SKIP12755 728 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms