RNA–Protein interactions for RNA: ENST00000541864.6

SLC12A4-204, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-204ENST00000541864 SEPT9Q9UHD8 586 aaPredicted RBP12.51□□□□□ -0.41
SLC12A4-204ENST00000541864 FAM153AQ9UHL3 310 aa12.51□□□□□ -0.41
SLC12A4-204ENST00000541864 HERC5Q9UII4 1024 aaKnown RBP12.51□□□□□ -0.41
SLC12A4-204ENST00000541864 PLAAQ9Y263 795 aa12.51□□□□□ -0.41
SLC12A4-204ENST00000541864 VIMP08670 466 aaKnown RBP12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 NBPF9Q3BBW0 867 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 MEI1Q5TIA1 1274 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 BTBD6Q96KE9 485 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 POP1Q99575 1024 aaKnown RBP12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 PSD3Q9NYI0 1048 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 RBAK-RBAKDNI3L0D1 243 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 NFIBO00712 420 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 TTI1O43156 1089 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 ITGA4P13612 1032 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 CALRP27797 417 aaKnown RBP12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 MTM1Q13496 603 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 SEL1L2Q5TEA6 688 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 OTUD6AQ7L8S5 288 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 SUPT20HQ8NEM7 779 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 CRYGNQ8WXF5 182 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 HSD17B14Q9BPX1 270 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 PI4K2AQ9BTU6 479 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 HEMGNQ9BXL5 484 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 LCMT1Q9UIC8 334 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 NOVA2Q9UNW9 492 aaKnown RBP12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 TMX2Q9Y320 296 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 IGLV3-22A0A075B6J6 115 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 SPDYE2BA6NHP3 402 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 SART1O43290 800 aaKnown RBP12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 SPDYE6P0CI01 402 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 MXI1P50539 228 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 MTMR1Q13613 665 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 HP1BP3Q5SSJ5 553 aaPredicted RBP12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 SEPT14Q6ZU15 432 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 TTLL6Q8N841 843 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 ANKRD42Q8N9B4 389 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 ZNF653Q96CK0 615 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 TUFT1Q9NNX1 390 aa12.5□□□□□ -0.41
SLC12A4-204ENST00000541864 SMCHD1A6NHR9 2005 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 AGPSO00116 658 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 KIF4AO95239 1232 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 FTLP02792 175 aaPredicted RBP12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 SEC24CP53992 1094 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 RASA3Q14644 834 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 FOXR2Q6PJQ5 311 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 C1orf186Q6ZWK4 172 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 EPM2AIP1Q7L775 607 aaPredicted RBP12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 SAMD7Q7Z3H4 446 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 GLG1Q92896 1179 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 PICK1Q9NRD5 415 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 WRAP73Q9P2S5 460 aaPredicted RBP12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 PDE4DIPQ5VU43 2346 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 ZBED4O75132 1171 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 PSMD10O75832 226 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 IFNB1P01574 187 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 FERP16591 822 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 MARK3P27448 753 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 FMO5P49326 533 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 IFT88Q13099 833 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 EMBQ6PCB8 327 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 DEFB132Q7Z7B7 95 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 PDGFDQ9GZP0 370 aaPredicted RBP12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 VCPKMTQ9H867 229 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 RNF14Q9UBS8 474 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 NOC2LQ9Y3T9 749 aaKnown RBP12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 CYP26A1O43174 497 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 KCNJ1P48048 391 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 AARSP49588 968 aaKnown RBP eCLIP12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 SEZ6Q53EL9 994 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 RSBN1LQ6PCB5 846 aaPredicted RBP12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 BTNL9Q6UXG8 535 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 ZIM3Q96PE6 472 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 CBWD1Q9BRT8 395 aa12.49□□□□□ -0.41
SLC12A4-204ENST00000541864 DDX3XO00571 662 aaKnown RBP eCLIP12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 MAFGO15525 162 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 SLC26A4O43511 780 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 CYP3A4P08684 503 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 CBWD6Q4V339 395 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 CBWD3Q5JTY5 395 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 CBWD5Q5RIA9 395 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 LRRC31Q6UY01 552 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 ARHGAP27Q6ZUM4 889 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 FAM151AQ8WW52 585 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 CASKIN2Q8WXE0 1202 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 INTS2Q9H0H0 1204 aaKnown RBP12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 AGPAT3Q9NRZ7 376 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 TBK1Q9UHD2 729 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 PCDHGC5Q9Y5F6 944 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 SLC16A3O15427 465 aaKnown RBP12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 KRT19P08727 400 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 TMOD1P28289 359 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 CALCOCO2Q13137 446 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 CCDC38Q502W7 563 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 ZNF720Q7Z2F6 126 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 RPUSD2Q8IZ73 545 aaKnown RBP12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 USP38Q8NB14 1042 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 SLC35G2Q8TBE7 412 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 SYNCQ9H7C4 482 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 ANKRD62A6NC57 917 aa12.48□□□□□ -0.41
SLC12A4-204ENST00000541864 TTC36A6NLP5 189 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms