RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 ANO6Q4KMQ2 910 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 NOL9Q5SY16 702 aaKnown RBP6.29□□□□□ -1.4
PRKDC-209ENST00000540819 NBPF12Q5TAG4 269 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-209ENST00000540819 NPNTQ6UXI9 565 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 RFX8Q6ZV50 586 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 OTOP1Q7RTM1 612 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 GALNT5Q7Z7M9 940 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 PRR18Q8N4B5 295 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 CHCHD4Q8N4Q1 142 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 C2orf69Q8N8R5 385 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 ZNF610Q8N9Z0 462 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 RNF141Q8WVD5 230 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 PHKBQ93100 1093 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 TMEM41AQ96HV5 264 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 ACAP3Q96P50 834 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 NUDT16L1Q9BRJ7 211 aaKnown RBP6.29□□□□□ -1.4
PRKDC-209ENST00000540819 ALG1Q9BT22 464 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 TMEM120AQ9BXJ8 343 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 ZDHHC5Q9C0B5 715 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 MCOLN1Q9GZU1 580 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 ASCC2Q9H1I8 757 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-209ENST00000540819 PRKRIP1Q9H875 184 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-209ENST00000540819 ATP6V0A4Q9HBG4 840 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 ZNF277Q9NRM2 450 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-209ENST00000540819 GPR27Q9NS67 375 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 GPR160Q9UJ42 338 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 CNOT6Q9ULM6 557 aaKnown RBP6.29□□□□□ -1.4
PRKDC-209ENST00000540819 YBX2Q9Y2T7 364 aaKnown RBP6.29□□□□□ -1.4
PRKDC-209ENST00000540819 NPFFR2Q9Y5X5 522 aa6.29□□□□□ -1.4
PRKDC-209ENST00000540819 H7C1D1 291 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 WNT9AO14904 365 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 DTNBO60941 627 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 LRRN2O75325 713 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 SEMA7AO75326 666 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 PDCP20941 246 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 C5AR1P21730 350 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 AGFG1P52594 562 aaKnown RBP6.28□□□□□ -1.4
PRKDC-209ENST00000540819 ARL4CP56559 192 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 CYP4F3Q08477 520 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 POLD3Q15054 466 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-209ENST00000540819 CNN3Q15417 329 aaKnown RBP6.28□□□□□ -1.4
PRKDC-209ENST00000540819 ZNF385BQ569K4 471 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 FAM209BQ5JX69 171 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 ITPRIPL1Q6GPH6 555 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 LSMEM1Q8N8F7 131 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 NELL1Q92832 810 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 INTS4Q96HW7 963 aaKnown RBP6.28□□□□□ -1.4
PRKDC-209ENST00000540819 RSRC1Q96IZ7 334 aaKnown RBP6.28□□□□□ -1.4
PRKDC-209ENST00000540819 ZC3H10Q96K80 434 aaKnown RBP6.28□□□□□ -1.4
PRKDC-209ENST00000540819 ZSCAN31Q96LW9 406 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-209ENST00000540819 CENPOQ9BU64 300 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 ZCCHC4Q9H5U6 513 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 NOL6Q9H6R4 1146 aaKnown RBP6.28□□□□□ -1.4
PRKDC-209ENST00000540819 PLEKHA5Q9HAU0 1116 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 DNAJC28Q9NX36 388 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 NKIRAS2Q9NYR9 191 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 SPO11Q9Y5K1 396 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 GPR45Q9Y5Y3 372 aa6.28□□□□□ -1.4
PRKDC-209ENST00000540819 EIF3FO00303 357 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-209ENST00000540819 FOXN3O00409 490 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-209ENST00000540819 BMP7P18075 431 aa6.27□□□□□ -1.41
PRKDC-209ENST00000540819 RPL17P18621 184 aaKnown RBP6.27□□□□□ -1.41
PRKDC-209ENST00000540819 HOXD12P35452 270 aa6.27□□□□□ -1.41
PRKDC-209ENST00000540819 ADD2P35612 726 aa6.27□□□□□ -1.41
PRKDC-209ENST00000540819 CLNS1AP54105 237 aaKnown RBP6.27□□□□□ -1.41
PRKDC-209ENST00000540819 NAP1L1P55209 391 aaKnown RBP6.27□□□□□ -1.41
PRKDC-209ENST00000540819 SMAD3P84022 425 aaKnown RBP6.27□□□□□ -1.41
PRKDC-209ENST00000540819 PFKPQ01813 784 aa6.27□□□□□ -1.41
PRKDC-209ENST00000540819 ROR1Q01973 937 aa6.27□□□□□ -1.41
PRKDC-209ENST00000540819 PPP2R5DQ14738 602 aa6.27□□□□□ -1.41
PRKDC-209ENST00000540819 TESK1Q15569 626 aa6.27□□□□□ -1.41
PRKDC-209ENST00000540819 SMAD2Q15796 467 aaKnown RBP6.27□□□□□ -1.41
PRKDC-209ENST00000540819 PGS1Q32NB8 556 aa6.27□□□□□ -1.41
PRKDC-209ENST00000540819 HSF5Q4G112 596 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-209ENST00000540819 DSTYKQ6XUX3 929 aa6.27□□□□□ -1.41
PRKDC-209ENST00000540819 LBX2Q6XYB7 198 aa6.27□□□□□ -1.41
PRKDC-209ENST00000540819 PPIL6Q8IXY8 311 aa6.27□□□□□ -1.41
PRKDC-209ENST00000540819 ANKS4BQ8N8V4 417 aa6.27□□□□□ -1.41
PRKDC-209ENST00000540819 GOLGA1Q92805 767 aa6.27□□□□□ -1.41
PRKDC-209ENST00000540819 KRTAP4-11Q9BYQ6 195 aa6.27□□□□□ -1.41
PRKDC-209ENST00000540819 ZNF552Q9H707 407 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-209ENST00000540819 SP110Q9HB58 689 aa6.27□□□□□ -1.41
PRKDC-209ENST00000540819 PRR13Q9NZ81 148 aa6.27□□□□□ -1.41
PRKDC-209ENST00000540819 GPR55Q9Y2T6 319 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-209ENST00000540819 PCDHB12Q9Y5F1 795 aa6.27□□□□□ -1.41
PRKDC-209ENST00000540819 TEX51A0A1B0GUA7 166 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 MYOCOSA0A1B0GUC4 107 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 CCDC66A2RUB6 948 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 B4E171 279 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 KPNA5O15131 536 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 NCK2O43639 380 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 NDUFS2O75306 463 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 HOXA5P20719 270 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 HTR1BP28222 390 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 TSPAN7P41732 249 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 MTNR1BP49286 362 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 DNM2P50570 870 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 MAPK10P53779 464 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 ST5P78524 1137 aa6.26□□□□□ -1.41
PRKDC-209ENST00000540819 KIF23Q02241 960 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms