RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SV2BQ7L1I2 683 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 TMC3Q7Z5M5 1100 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 NLRX1Q86UT6 975 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 PALB2Q86YC2 1186 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 GUF1Q8N442 669 aaKnown RBP5.64□□□□□ -1.51
PROM1-220ENST00000540805 KLHL23Q8NBE8 558 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 ACTRT1Q8TDG2 376 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 SNX29Q8TEQ0 813 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 SCFD2Q8WU76 684 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 ANKS1AQ92625 1134 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 CRAMP1Q96RY5 1269 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 SELENOSQ9BQE4 189 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 UBE2OQ9C0C9 1292 aaKnown RBP5.64□□□□□ -1.51
PROM1-220ENST00000540805 LRRC27Q9C0I9 530 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 NACA2Q9H009 215 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 CD209Q9NNX6 404 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 FAM114A2Q9NRY5 505 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 NOP53Q9NZM5 478 aaKnown RBP5.64□□□□□ -1.51
PROM1-220ENST00000540805 RNF181Q9P0P0 153 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 ZMYND8Q9ULU4 1186 aaPredicted RBP5.64□□□□□ -1.51
PROM1-220ENST00000540805 PCDHA6Q9UN73 950 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 SLC12A4Q9UP95 1085 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 NOC2LQ9Y3T9 749 aaKnown RBP5.64□□□□□ -1.51
PROM1-220ENST00000540805 PCDHA8Q9Y5H6 950 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 C10orf71Q711Q0 1435 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 WDR90Q96KV7 1748 aa5.64□□□□□ -1.51
PROM1-220ENST00000540805 KLRF2D3W0D1 207 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 CEP290O15078 2479 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 SART1O43290 800 aaKnown RBP5.63□□□□□ -1.51
PROM1-220ENST00000540805 TLR2O60603 784 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 MMEP08473 750 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 USP17L8P0C7I0 530 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 KRT5P13647 590 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 CHRNA5P30532 468 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 USP11P51784 963 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 POLR2FP61218 127 aaKnown RBP5.63□□□□□ -1.51
PROM1-220ENST00000540805 DHX9Q08211 1270 aaKnown RBP5.63□□□□□ -1.51
PROM1-220ENST00000540805 IFRD2Q12894 506 aaPredicted RBP5.63□□□□□ -1.51
PROM1-220ENST00000540805 KIF22Q14807 665 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 ASIC2Q16515 512 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 RNF220Q5VTB9 566 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 UNC13DQ70J99 1090 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 ERICH1Q86X53 443 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 PNMA1Q8ND90 353 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 C7orf43Q8WVR3 580 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 AP1M1Q9BXS5 423 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 NSRP1Q9H0G5 558 aaKnown RBP5.63□□□□□ -1.51
PROM1-220ENST00000540805 DDX47Q9H0S4 455 aaKnown RBP5.63□□□□□ -1.51
PROM1-220ENST00000540805 ZNF277Q9NRM2 450 aaPredicted RBP5.63□□□□□ -1.51
PROM1-220ENST00000540805 GPR75-ASB3A0A0A6YYF3 556 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 SMCO2A6NFE2 343 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 TTC36A6NLP5 189 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 BHMG1C9JSJ3 638 aaPredicted RBP5.63□□□□□ -1.51
PROM1-220ENST00000540805 KRIT1O00522 736 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 ASAP2O43150 1006 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 DAPK3O43293 454 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 CHN1P15882 459 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 FLT3P36888 993 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 KCNMA1Q12791 1236 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 SLC5A9Q2M3M2 681 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 PRR16Q569H4 304 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 SLFN13Q68D06 897 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 GALNT17Q6IS24 598 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 DAGLBQ8NCG7 672 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 CHURC1Q8WUH1 139 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 TLCD1Q96CP7 247 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.63□□□□□ -1.51
PROM1-220ENST00000540805 PACSIN1Q9BY11 444 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 SLITRK6Q9H5Y7 841 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 ATP8A2Q9NTI2 1148 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 PNMA2Q9UL42 364 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 A0A087X0T9 212 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 PVALEFA0A1B0GWK0 134 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 BTNL10A8MVZ5 291 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 SMAPO00193 183 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 EDIL3O43854 480 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 SMIM24O75264 130 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 FAM228BP0C875 321 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 CTCFP49711 727 aaPredicted RBP5.63□□□□□ -1.51
PROM1-220ENST00000540805 ABCB5Q2M3G0 1257 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 LRRC55Q6ZSA7 311 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 REXO1Q8N1G1 1221 aaKnown RBP5.63□□□□□ -1.51
PROM1-220ENST00000540805 RNF34Q969K3 372 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 PPP1R16BQ96T49 567 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 APOL6Q9BWW8 343 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 DPH5Q9H2P9 285 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 PAPOLBQ9NRJ5 636 aaKnown RBP5.63□□□□□ -1.51
PROM1-220ENST00000540805 PCMTD2Q9NV79 361 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 SERPINA10Q9UK55 444 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 AGAP1Q9UPQ3 857 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 STK38LQ9Y2H1 464 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 UTP11Q9Y3A2 253 aaKnown RBP5.63□□□□□ -1.51
PROM1-220ENST00000540805 COL4A3BPQ9Y5P4 624 aa5.63□□□□□ -1.51
PROM1-220ENST00000540805 GOLGA6L10A0A0M3HER8 536 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 CYTH3O43739 400 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 RTN3O95197 1032 aaPredicted RBP5.62□□□□□ -1.51
PROM1-220ENST00000540805 OATP04181 439 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 HOXA7P31268 230 aaPredicted RBP5.62□□□□□ -1.51
PROM1-220ENST00000540805 ADCY7P51828 1080 aa5.62□□□□□ -1.51
PROM1-220ENST00000540805 POLE2P56282 527 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms