RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 KATNBL1Q9H079 304 aa8.68□□□□□ -1.02
TRAV11-201ENST00000539512 USP40Q9NVE5 1235 aa8.68□□□□□ -1.02
TRAV11-201ENST00000539512 CHPF2Q9P2E5 772 aa8.68□□□□□ -1.02
TRAV11-201ENST00000539512 ADAM29Q9UKF5 820 aa8.68□□□□□ -1.02
TRAV11-201ENST00000539512 MROH6A6NGR9 719 aa8.67□□□□□ -1.02
TRAV11-201ENST00000539512 PCDHGA12O60330 932 aa8.67□□□□□ -1.02
TRAV11-201ENST00000539512 PRAMEF4O60810 478 aa8.67□□□□□ -1.02
TRAV11-201ENST00000539512 NDUFS2O75306 463 aa8.67□□□□□ -1.02
TRAV11-201ENST00000539512 U2AF1L5P0DN76 240 aaPredicted RBP8.67□□□□□ -1.02
TRAV11-201ENST00000539512 PF4V1P10720 104 aa8.67□□□□□ -1.02
TRAV11-201ENST00000539512 U2AF1Q01081 240 aaKnown RBP eCLIP8.67□□□□□ -1.02
TRAV11-201ENST00000539512 GJC2Q5T442 439 aaPredicted RBP8.67□□□□□ -1.02
TRAV11-201ENST00000539512 BTNL9Q6UXG8 535 aa8.67□□□□□ -1.02
TRAV11-201ENST00000539512 SP8Q8IXZ3 490 aa8.67□□□□□ -1.02
TRAV11-201ENST00000539512 RAVER1Q8IY67 606 aaKnown RBP8.67□□□□□ -1.02
TRAV11-201ENST00000539512 LRRC56Q8IYG6 542 aaPredicted RBP8.67□□□□□ -1.02
TRAV11-201ENST00000539512 HAPLN2Q9GZV7 340 aa8.67□□□□□ -1.02
TRAV11-201ENST00000539512 CDH19Q9H159 772 aa8.67□□□□□ -1.02
TRAV11-201ENST00000539512 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.67□□□□□ -1.02
TRAV11-201ENST00000539512 DNM3Q9UQ16 869 aa8.67□□□□□ -1.02
TRAV11-201ENST00000539512 PCDHGA9Q9Y5G4 932 aaKnown RBP8.67□□□□□ -1.02
TRAV11-201ENST00000539512 PCDHGA8Q9Y5G5 932 aa8.67□□□□□ -1.02
TRAV11-201ENST00000539512 PCDHGA7Q9Y5G6 932 aa8.67□□□□□ -1.02
TRAV11-201ENST00000539512 PCDHGA6Q9Y5G7 932 aa8.67□□□□□ -1.02
TRAV11-201ENST00000539512 PCDHGA3Q9Y5H0 932 aa8.67□□□□□ -1.02
TRAV11-201ENST00000539512 PCDHGA2Q9Y5H1 932 aa8.67□□□□□ -1.02
TRAV11-201ENST00000539512 ABLIM3O94929 683 aa8.66□□□□□ -1.02
TRAV11-201ENST00000539512 PARNO95453 639 aaKnown RBP8.66□□□□□ -1.02
TRAV11-201ENST00000539512 SCGB1D2O95969 90 aa8.66□□□□□ -1.02
TRAV11-201ENST00000539512 SLURP1P55000 103 aa8.66□□□□□ -1.02
TRAV11-201ENST00000539512 KIF23Q02241 960 aaPredicted RBP8.66□□□□□ -1.02
TRAV11-201ENST00000539512 MALLQ13021 153 aa8.66□□□□□ -1.02
TRAV11-201ENST00000539512 ADAM15Q13444 863 aa8.66□□□□□ -1.02
TRAV11-201ENST00000539512 ADRM1Q16186 407 aa8.66□□□□□ -1.02
TRAV11-201ENST00000539512 KRT40Q6A162 431 aa8.66□□□□□ -1.02
TRAV11-201ENST00000539512 PLEKHH3Q7Z736 793 aa8.66□□□□□ -1.02
TRAV11-201ENST00000539512 SLC41A1Q8IVJ1 513 aa8.66□□□□□ -1.02
TRAV11-201ENST00000539512 OR10A2Q9H208 303 aa8.66□□□□□ -1.02
TRAV11-201ENST00000539512 TSPAN6O43657 245 aa8.65□□□□□ -1.02
TRAV11-201ENST00000539512 SEC24DO94855 1032 aaPredicted RBP8.65□□□□□ -1.02
TRAV11-201ENST00000539512 HNRNPLP14866 589 aaKnown RBP eCLIP8.65□□□□□ -1.02
TRAV11-201ENST00000539512 CSF2RBP32927 897 aa8.65□□□□□ -1.02
TRAV11-201ENST00000539512 MEF2AQ02078 507 aaPredicted RBP8.65□□□□□ -1.02
TRAV11-201ENST00000539512 UAP1L1Q3KQV9 507 aa8.65□□□□□ -1.02
TRAV11-201ENST00000539512 AGBL4Q5VU57 503 aa8.65□□□□□ -1.02
TRAV11-201ENST00000539512 TRIM68Q6AZZ1 485 aa8.65□□□□□ -1.02
TRAV11-201ENST00000539512 UNC5BQ8IZJ1 945 aa8.65□□□□□ -1.02
TRAV11-201ENST00000539512 GLB1L3Q8NCI6 653 aaPredicted RBP8.65□□□□□ -1.02
TRAV11-201ENST00000539512 KIAA1683Q9H0B3 1180 aa8.65□□□□□ -1.02
TRAV11-201ENST00000539512 GREM2Q9H772 168 aa8.65□□□□□ -1.02
TRAV11-201ENST00000539512 C14orf93Q9H972 538 aaKnown RBP8.65□□□□□ -1.02
TRAV11-201ENST00000539512 RBM8AQ9Y5S9 174 aaKnown RBP8.65□□□□□ -1.02
TRAV11-201ENST00000539512 LY86O95711 162 aa8.64□□□□□ -1.03
TRAV11-201ENST00000539512 ZNF888P0CJ79 500 aaPredicted RBP8.64□□□□□ -1.03
TRAV11-201ENST00000539512 C5AR1P21730 350 aa8.64□□□□□ -1.03
TRAV11-201ENST00000539512 ODF1Q14990 250 aa8.64□□□□□ -1.03
TRAV11-201ENST00000539512 USP30Q70CQ3 517 aa8.64□□□□□ -1.03
TRAV11-201ENST00000539512 KBTBD2Q8IY47 623 aa8.64□□□□□ -1.03
TRAV11-201ENST00000539512 CMTR2Q8IYT2 770 aaKnown RBP8.64□□□□□ -1.03
TRAV11-201ENST00000539512 BCL6BQ8N143 479 aaPredicted RBP8.64□□□□□ -1.03
TRAV11-201ENST00000539512 THEMISQ8N1K5 641 aaPredicted RBP8.64□□□□□ -1.03
TRAV11-201ENST00000539512 NKD2Q969F2 451 aaPredicted RBP8.64□□□□□ -1.03
TRAV11-201ENST00000539512 SLC7A6OSQ96CW6 309 aaPredicted RBP8.64□□□□□ -1.03
TRAV11-201ENST00000539512 NUP88Q99567 741 aaPredicted RBP8.64□□□□□ -1.03
TRAV11-201ENST00000539512 FDXACB1Q9BRP7 624 aaPredicted RBP8.64□□□□□ -1.03
TRAV11-201ENST00000539512 RTFDC1Q9BY42 306 aaPredicted RBP8.64□□□□□ -1.03
TRAV11-201ENST00000539512 TCF7L1Q9HCS4 588 aa8.64□□□□□ -1.03
TRAV11-201ENST00000539512 PNMA8BQ9ULN7 279 aaPredicted RBP8.64□□□□□ -1.03
TRAV11-201ENST00000539512 NOB1Q9ULX3 412 aaKnown RBP8.64□□□□□ -1.03
TRAV11-201ENST00000539512 A0A0A6YYK5 440 aaPredicted RBP8.63□□□□□ -1.03
TRAV11-201ENST00000539512 GOLGA6CA6NDK9 693 aa8.63□□□□□ -1.03
TRAV11-201ENST00000539512 GOLGA6BA6NDN3 693 aa8.63□□□□□ -1.03
TRAV11-201ENST00000539512 DTNBO60941 627 aa8.63□□□□□ -1.03
TRAV11-201ENST00000539512 LTA4HP09960 611 aaKnown RBP8.63□□□□□ -1.03
TRAV11-201ENST00000539512 GOLGA6DP0CG33 693 aa8.63□□□□□ -1.03
TRAV11-201ENST00000539512 ADKP55263 362 aaKnown RBP8.63□□□□□ -1.03
TRAV11-201ENST00000539512 CD69Q07108 199 aa8.63□□□□□ -1.03
TRAV11-201ENST00000539512 NT5DC1Q5TFE4 455 aa8.63□□□□□ -1.03
TRAV11-201ENST00000539512 LARP4Q71RC2 724 aaKnown RBP eCLIP8.63□□□□□ -1.03
TRAV11-201ENST00000539512 TP53I13Q8NBR0 393 aaPredicted RBP8.63□□□□□ -1.03
TRAV11-201ENST00000539512 PLA2G15Q8NCC3 412 aa8.63□□□□□ -1.03
TRAV11-201ENST00000539512 SOX7Q9BT81 388 aa8.63□□□□□ -1.03
TRAV11-201ENST00000539512 RHOBTB2Q9BYZ6 727 aa8.63□□□□□ -1.03
TRAV11-201ENST00000539512 GOLGA6AQ9NYA3 693 aa8.63□□□□□ -1.03
TRAV11-201ENST00000539512 NR2E1Q9Y466 385 aa8.63□□□□□ -1.03
TRAV11-201ENST00000539512 DBX1A6NMT0 343 aa8.62□□□□□ -1.03
TRAV11-201ENST00000539512 AKR1B10O60218 316 aa8.62□□□□□ -1.03
TRAV11-201ENST00000539512 PHF2O75151 1096 aa8.62□□□□□ -1.03
TRAV11-201ENST00000539512 RFPL1O75677 317 aa8.62□□□□□ -1.03
TRAV11-201ENST00000539512 SASH1O94885 1247 aa8.62□□□□□ -1.03
TRAV11-201ENST00000539512 GAAP10253 952 aa8.62□□□□□ -1.03
TRAV11-201ENST00000539512 GSPT1P15170 499 aaKnown RBP8.62□□□□□ -1.03
TRAV11-201ENST00000539512 CYP2C19P33261 490 aa8.62□□□□□ -1.03
TRAV11-201ENST00000539512 TCIRG1Q13488 830 aa8.62□□□□□ -1.03
TRAV11-201ENST00000539512 LRRC41Q15345 812 aa8.62□□□□□ -1.03
TRAV11-201ENST00000539512 MIGA2Q7L4E1 593 aa8.62□□□□□ -1.03
TRAV11-201ENST00000539512 LGI4Q8N135 537 aa8.62□□□□□ -1.03
TRAV11-201ENST00000539512 MYO1HQ8N1T3 1032 aa8.62□□□□□ -1.03
TRAV11-201ENST00000539512 RBM12Q9NTZ6 932 aaKnown RBP8.62□□□□□ -1.03
TRAV11-201ENST00000539512 RPTORQ8N122 1335 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms