RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 ATP6V0A4Q9HBG4 840 aa10.11□□□□□ -0.79
RTN4IP1-204ENST00000539449 OLFML3Q9NRN5 406 aa10.11□□□□□ -0.79
RTN4IP1-204ENST00000539449 NRBP1Q9UHY1 535 aa10.11□□□□□ -0.79
RTN4IP1-204ENST00000539449 TRPC6Q9Y210 931 aa10.11□□□□□ -0.79
RTN4IP1-204ENST00000539449 ZMYM2Q9UBW7 1377 aa10.11□□□□□ -0.79
RTN4IP1-204ENST00000539449 IGKV6-21A0A0C4DH24 114 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 TISP43B9A030 160 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 HAS3O00219 553 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 PGK1P00558 417 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 RFC5P40937 340 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 NPTX2P47972 431 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 ATN1P54259 1190 aaPredicted RBP10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 NCKAP1LP55160 1127 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 GJA9P57773 515 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 RTP1P59025 263 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 FANCCQ00597 558 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 DGKDQ16760 1214 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 ZNF484Q5JVG2 852 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 TAS1R3Q7RTX0 852 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 LRRC71Q8N4P6 559 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 BADQ92934 168 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 ZNF668Q96K58 619 aaPredicted RBP10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 GAS2L1Q99501 681 aaPredicted RBP10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 TIPINQ9BVW5 301 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 GTPBP4Q9BZE4 634 aaKnown RBP10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 UPF3AQ9H1J1 476 aaKnown RBP10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 ZNF576Q9H609 170 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 ERAP1Q9NZ08 941 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 IFNKQ9P0W0 207 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 SEL1LQ9UBV2 794 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 USP20Q9Y2K6 914 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 Q9Y3F1 56 aa10.1□□□□□ -0.79
RTN4IP1-204ENST00000539449 SCN10AQ9Y5Y9 1956 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 CCDC169A6NNP5 214 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 K7ENM7 598 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 CLIC2O15247 247 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 SEPT4O43236 478 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 ADAMTS4O75173 837 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 C22orf31O95567 290 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 F2P00734 622 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 EDN1P05305 212 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 MAPTP10636 758 aaKnown RBP10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 BMP1P13497 986 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 DNAJB2P25686 324 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 KLRC1P26715 233 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 PPP1R2P41236 205 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 PSEN2P49810 448 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 SLC26A2P50443 739 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 CLCN3P51790 818 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 CHMP4BP1P59074 171 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 TBC1D8BQ0IIM8 1120 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 CCDC85BQ15834 202 aaPredicted RBP10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 FSCN1Q16658 493 aaKnown RBP10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 TPD52L1Q16890 204 aaPredicted RBP10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 KNOP1Q1ED39 458 aaKnown RBP10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 MARCH8Q5T0T0 291 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 SARM1Q6SZW1 724 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 LRRC55Q6ZSA7 311 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 HAUS6Q7Z4H7 955 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 LINC01465Q8N7H1 131 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 TMEM161BQ8NDZ6 487 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 MCPH1Q8NEM0 835 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 PRPF31Q8WWY3 499 aaKnown RBP10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 KIFAP3Q92845 792 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 RNPC3Q96LT9 517 aaKnown RBP10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 DRC1Q96MC2 740 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 XPO4Q9C0E2 1151 aaKnown RBP10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 SUGCTQ9HAC7 445 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 SETD4Q9NVD3 440 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 INTS13Q9NVM9 706 aa10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 LARSQ9P2J5 1176 aaKnown RBP10.09□□□□□ -0.79
RTN4IP1-204ENST00000539449 KCNJ18B7U540 433 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 ANKRD63C9JTQ0 380 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 EIF3DO15371 548 aaKnown RBP eCLIP10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 GPR37L1O60883 481 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 C6orf222P0C671 652 aaPredicted RBP10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 SMIM10L2AP0DMW4 78 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 SMIM10L2BP0DMW5 78 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 NKX3-2P78367 333 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 ZNF200P98182 395 aaPredicted RBP10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 GTF2BQ00403 316 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 PURAQ00577 322 aaKnown RBP10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 CAPSQ13938 189 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 KCNJ12Q14500 433 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 MFSD10Q14728 455 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 GRIK4Q16099 956 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 IER5Q5VY09 327 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 EFCAB12Q6NXP0 572 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 ZC3H3Q8IXZ2 948 aaKnown RBP10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 CSGALNACT2Q8N6G5 542 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 ZSWIM2Q8NEG5 633 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 KLHDC9Q8NEP7 349 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 SPIRE2Q8WWL2 714 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 PDLIM2Q96JY6 352 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 PPP1R9BQ96SB3 815 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 NTPCRQ9BSD7 190 aaKnown RBP10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 TRIM5Q9C035 493 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 ST6GALNAC4Q9H4F1 302 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 C11orf16Q9NQ32 467 aa10.08□□□□□ -0.8
RTN4IP1-204ENST00000539449 KMT5AQ9NQR1 393 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms