RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 PRR18Q8N4B5 295 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 LINC00482Q8N8I6 264 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 KYQ8NBH2 561 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 PIK3C3Q8NEB9 887 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 NUDT10Q8NFP7 164 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 WDR48Q8TAF3 677 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 MVB12AQ96EY5 273 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 NUDT11Q96G61 164 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 HIST1H2AHQ96KK5 128 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 HIST1H2AJQ99878 128 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 POLR3BQ9NW08 1133 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-210ENST00000539303 SPATA6Q9NWH7 488 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-210ENST00000539303 PCDHA13Q9Y5I0 950 aa4.05□□□□□ -1.76
SNHG1-210ENST00000539303 LRRC14BA6NHZ5 514 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 APAF1O14727 1248 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 CUTAO60888 179 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 KLHL18O94889 574 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 LY86O95711 162 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 MYL1P05976 194 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 GSPT1P15170 499 aaKnown RBP4.04□□□□□ -1.76
SNHG1-210ENST00000539303 VCAM1P19320 739 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 NEK3P51956 506 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 DLG4P78352 724 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 DLX2Q07687 328 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-210ENST00000539303 UBE4AQ14139 1066 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 SSPNQ14714 243 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 ACAP1Q15027 740 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 NOMO1Q15155 1222 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 DGKDQ16760 1214 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 MUM1L1Q5H9M0 696 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 PRR31Q5SQ13 230 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 IL31Q6EBC2 164 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 TRMT10BQ6PF06 316 aaKnown RBP4.04□□□□□ -1.76
SNHG1-210ENST00000539303 LMBR1LQ6UX01 489 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 BTNL9Q6UXG8 535 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 LARP4Q71RC2 724 aaKnown RBP eCLIP4.04□□□□□ -1.76
SNHG1-210ENST00000539303 NBPF11Q86T75 865 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 FAM129CQ86XR2 697 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 MSL3Q8N5Y2 521 aaKnown RBP4.04□□□□□ -1.76
SNHG1-210ENST00000539303 MARCH10Q8NA82 808 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-210ENST00000539303 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.04□□□□□ -1.766e-32■□□□□ 8.9
SNHG1-210ENST00000539303 PPP1R14CQ8TAE6 165 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 FNIP1Q8TF40 1166 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 FATE1Q969F0 183 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 NKD2Q969F2 451 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-210ENST00000539303 PRDM11Q9NQV5 511 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 PTPN22Q9Y2R2 807 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 PMF1-BGLAPU3KQ54 211 aa4.04□□□□□ -1.76
SNHG1-210ENST00000539303 A0A0G2JNJ9 132 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 A0A1B0GTL3 188 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 A0A1W2PR48 441 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 H0Y858 1186 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 ETV2O00321 342 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-210ENST00000539303 DDX3XO00571 662 aaKnown RBP eCLIP4.03□□□□□ -1.76
SNHG1-210ENST00000539303 WNT10BO00744 389 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 ERC2O15083 957 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 UBXN7O94888 489 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 U2AF1L5P0DN76 240 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-210ENST00000539303 JUNBP17275 347 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-210ENST00000539303 TAL1P17542 331 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-210ENST00000539303 CTSSP25774 331 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 ADSLP30566 484 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-210ENST00000539303 SLC6A9P48067 706 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 GPR15P49685 360 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 IRAK1P51617 712 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 SLC16A1P53985 500 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 RRADP55042 308 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 U2AF1Q01081 240 aaKnown RBP eCLIP4.03□□□□□ -1.764e-8■■□□□ 13.4
SNHG1-210ENST00000539303 DSC2Q02487 901 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 TOP3AQ13472 1001 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-210ENST00000539303 ANO4Q32M45 955 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 PGS1Q32NB8 556 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 SWSAP1Q6NVH7 229 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 Q6ZVL8 140 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 GPR155Q7Z3F1 870 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 GLB1L2Q8IW92 636 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 CAMKK1Q8N5S9 505 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 FBXO18Q8NFZ0 1043 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 ZNF526Q8TF50 670 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-210ENST00000539303 RSAD2Q8WXG1 361 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 HOXB13Q92826 284 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-210ENST00000539303 MPHOSPH6Q99547 160 aaKnown RBP4.03□□□□□ -1.76
SNHG1-210ENST00000539303 MAP3K14Q99558 947 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 SPATA25Q9BR10 227 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 LRFN3Q9BTN0 628 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 ADI1Q9BV57 179 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 SARGQ9BW04 601 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 KIAA1683Q9H0B3 1180 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 GREM2Q9H772 168 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 C1orf112Q9NSG2 853 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 SAE1Q9UBE0 346 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-210ENST00000539303 Q9UFV3 132 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 RCAN3Q9UKA8 241 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 SIK3Q9Y2K2 1263 aa4.03□□□□□ -1.76
SNHG1-210ENST00000539303 TPP1O14773 563 aa4.02□□□□□ -1.77
SNHG1-210ENST00000539303 ADCY6O43306 1168 aa4.02□□□□□ -1.77
SNHG1-210ENST00000539303 PRAMEF4O60810 478 aa4.02□□□□□ -1.77
SNHG1-210ENST00000539303 SEMA7AO75326 666 aa4.02□□□□□ -1.77
SNHG1-210ENST00000539303 MAFO75444 373 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-210ENST00000539303 ZNF888P0CJ79 500 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms