RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 FMNL3Q8IVF7 1028 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 BANK1Q8NDB2 785 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 LMO3Q8TAP4 145 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 LNX1Q8TBB1 728 aaPredicted RBP10.07□□□□□ -0.8
DDB1-211ENST00000538280 CAVIN3Q969G5 261 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 SELENOOQ9BVL4 669 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 STK33Q9BYT3 514 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 POLD4Q9HCU8 107 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 KCNH7Q9NS40 1196 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 RNF216Q9NWF9 866 aaPredicted RBP10.07□□□□□ -0.8
DDB1-211ENST00000538280 DMGDHQ9UI17 866 aaKnown RBP10.07□□□□□ -0.8
DDB1-211ENST00000538280 PPP1R9AQ9ULJ8 1098 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 F8VZ95 297 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 P4HA2O15460 535 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 CTNND1O60716 968 aaKnown RBP10.06□□□□□ -0.8
DDB1-211ENST00000538280 N4BP1O75113 896 aaKnown RBP10.06□□□□□ -0.8
DDB1-211ENST00000538280 USP2O75604 605 aaPredicted RBP10.06□□□□□ -0.8
DDB1-211ENST00000538280 FLOT1O75955 427 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 KIF4AO95239 1232 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 SOX5P35711 763 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 RARRES1P49788 294 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 EPHB4P54760 987 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 NCKAP1LP55160 1127 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 BFSP1Q12934 665 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 SPP2Q13103 211 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 NNTQ13423 1086 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 KIF22Q14807 665 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 MUM1L1Q5H9M0 696 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 ODR4Q5SWX8 454 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 CCDC181Q5TID7 509 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 TCERG1LQ5VWI1 586 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 ALKBH5Q6P6C2 394 aaKnown RBP10.06□□□□□ -0.8
DDB1-211ENST00000538280 GJB7Q6PEY0 223 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 PADI6Q6TGC4 694 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 C4orf19Q8IY42 314 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 HDAC7Q8WUI4 952 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 VTI1AQ96AJ9 217 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 ARMC5Q96C12 935 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 SLC10A4Q96EP9 437 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 PBKQ96KB5 322 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.06□□□□□ -0.8
DDB1-211ENST00000538280 INTS2Q9H0H0 1204 aaKnown RBP10.06□□□□□ -0.8
DDB1-211ENST00000538280 TMEM206Q9H813 350 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 GDF3Q9NR23 364 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 RBM12Q9NTZ6 932 aaKnown RBP10.06□□□□□ -0.8
DDB1-211ENST00000538280 TBC1D22BQ9NU19 505 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 EHD2Q9NZN4 543 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 STIM2Q9P246 746 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 ADAM21Q9UKJ8 722 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 ZHX2Q9Y6X8 837 aa10.06□□□□□ -0.8
DDB1-211ENST00000538280 COL11A1P12107 1806 aaPredicted RBP10.05□□□□□ -0.8
DDB1-211ENST00000538280 AGPSO00116 658 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 EVI5O60447 810 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 FTCDO95954 541 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 ALDH1A1P00352 501 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 MYCP01106 439 aaPredicted RBP10.05□□□□□ -0.8
DDB1-211ENST00000538280 H2AFZP0C0S5 128 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 TMEM253P0C7T8 217 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 PLS3P13797 630 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 CXCR5P32302 372 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 QARSP47897 775 aaKnown RBP10.05□□□□□ -0.8
DDB1-211ENST00000538280 GTF2BQ00403 316 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 MYL7Q01449 175 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 ARID5AQ03989 594 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 TNFAIP1Q13829 316 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 PGM5Q15124 567 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 TCEAL1Q15170 157 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 CBWD6Q4V339 395 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 CBWD3Q5JTY5 395 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 CBWD5Q5RIA9 395 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 C1orf220Q5T0J3 134 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 C8orf74Q6P047 294 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 XRRA1Q6P2D8 792 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 EMBQ6PCB8 327 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 H2AFVQ71UI9 128 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 VPS36Q86VN1 386 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 KSR1Q8IVT5 923 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 RASGEF1CQ8N431 466 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 EIF1ADQ8N9N8 165 aaKnown RBP10.05□□□□□ -0.8
DDB1-211ENST00000538280 REPS2Q8NFH8 660 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 RDM1Q8NG50 284 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 TPCN2Q8NHX9 752 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 HVCN1Q96D96 273 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 MS4A14Q96JA4 679 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 ZFP91Q96JP5 570 aaPredicted RBP10.05□□□□□ -0.8
DDB1-211ENST00000538280 C12orf42Q96LP6 360 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 ACCSQ96QU6 501 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 TAAR1Q96RJ0 339 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 SENP7Q9BQF6 1050 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 PDCD2LQ9BRP1 358 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 ARHGAP39Q9C0H5 1083 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 MAF1Q9H063 256 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 ELP3Q9H9T3 547 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 ANKEF1Q9NU02 776 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 SMARCAL1Q9NZC9 954 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 LARSQ9P2J5 1176 aaKnown RBP10.05□□□□□ -0.8
DDB1-211ENST00000538280 APEX2Q9UBZ4 518 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 ZNF112Q9UJU3 913 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 DNAJC12Q9UKB3 198 aa10.05□□□□□ -0.8
DDB1-211ENST00000538280 ZHX1Q9UKY1 873 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms