RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ARL6IP4Q66PJ3 421 aaKnown RBP14.61□□□□□ -0.07
PRKDC-206ENST00000536429 FAM43BQ6ZT52 329 aaPredicted RBP14.61□□□□□ -0.07
PRKDC-206ENST00000536429 IFNLR1Q8IU57 520 aaPredicted RBP14.61□□□□□ -0.07
PRKDC-206ENST00000536429 LRRC15Q8TF66 581 aa14.61□□□□□ -0.07
PRKDC-206ENST00000536429 CPB2Q96IY4 423 aa14.61□□□□□ -0.07
PRKDC-206ENST00000536429 TYW1Q9NV66 732 aaKnown RBP14.61□□□□□ -0.07
PRKDC-206ENST00000536429 INO80B-WBP1J3KQ70 363 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 B4GALT5O43286 388 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 STX6O43752 255 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 DNAJB1P25685 340 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 TFDP1Q14186 410 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 PTPAQ15257 358 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 SPRYD3Q8NCJ5 442 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 MCPH1Q8NEM0 835 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 HELQQ8TDG4 1101 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 KIFC3Q9BVG8 833 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 RUSC1Q9BVN2 902 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 TRAIPQ9BWF2 469 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 TMEM117Q9H0C3 514 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 CWH43Q9H720 699 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 ALG13Q9NP73 1137 aaKnown RBP14.6□□□□□ -0.07
PRKDC-206ENST00000536429 FAM105AQ9NUU6 356 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 DACT1Q9NYF0 836 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 DNM3Q9UQ16 869 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 USP20Q9Y2K6 914 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 STK24Q9Y6E0 443 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 MYO7AQ13402 2215 aa14.6□□□□□ -0.07
PRKDC-206ENST00000536429 LRRIQ4A6NIV6 560 aa14.59□□□□□ -0.07
PRKDC-206ENST00000536429 TTLL13PA6NNM8 815 aa14.59□□□□□ -0.07
PRKDC-206ENST00000536429 EYA4O95677 639 aa14.59□□□□□ -0.07
PRKDC-206ENST00000536429 EDN1P05305 212 aa14.59□□□□□ -0.07
PRKDC-206ENST00000536429 ITGB1P05556 798 aa14.59□□□□□ -0.07
PRKDC-206ENST00000536429 RB1P06400 928 aa14.59□□□□□ -0.07
PRKDC-206ENST00000536429 PBX3P40426 434 aa14.59□□□□□ -0.07
PRKDC-206ENST00000536429 CEBPZQ03701 1054 aaKnown RBP14.59□□□□□ -0.07
PRKDC-206ENST00000536429 POU5F1BQ06416 359 aa14.59□□□□□ -0.07
PRKDC-206ENST00000536429 CAMK1Q14012 370 aa14.59□□□□□ -0.07
PRKDC-206ENST00000536429 TMEM119Q4V9L6 283 aa14.59□□□□□ -0.07
PRKDC-206ENST00000536429 HYIQ5T013 277 aa14.59□□□□□ -0.07
PRKDC-206ENST00000536429 FOXD4L5Q5VV16 416 aaPredicted RBP14.59□□□□□ -0.07
PRKDC-206ENST00000536429 CDR2LQ86X02 465 aaPredicted RBP14.59□□□□□ -0.07
PRKDC-206ENST00000536429 DAW1Q8N136 415 aa14.59□□□□□ -0.07
PRKDC-206ENST00000536429 KLHL23Q8NBE8 558 aa14.59□□□□□ -0.07
PRKDC-206ENST00000536429 FOXD4L4Q8WXT5 416 aaPredicted RBP14.59□□□□□ -0.07
PRKDC-206ENST00000536429 MRPL38Q96DV4 380 aaKnown RBP14.59□□□□□ -0.07
PRKDC-206ENST00000536429 EIF2AQ9BY44 585 aaKnown RBP14.59□□□□□ -0.07
PRKDC-206ENST00000536429 LMCD1Q9NZU5 365 aa14.59□□□□□ -0.07
PRKDC-206ENST00000536429 PLAGL2Q9UPG8 496 aa14.59□□□□□ -0.07
PRKDC-206ENST00000536429 RWDD3Q9Y3V2 267 aa14.59□□□□□ -0.07
PRKDC-206ENST00000536429 PCDHB2Q9Y5E7 798 aa14.59□□□□□ -0.07
PRKDC-206ENST00000536429 ERLIN2O94905 339 aa14.58□□□□□ -0.08
PRKDC-206ENST00000536429 EOMESO95936 686 aa14.58□□□□□ -0.08
PRKDC-206ENST00000536429 ARF4P18085 180 aaPredicted RBP14.58□□□□□ -0.08
PRKDC-206ENST00000536429 MARCKSP29966 332 aaPredicted RBP14.58□□□□□ -0.08
PRKDC-206ENST00000536429 AFF1P51825 1210 aaKnown RBP14.58□□□□□ -0.08
PRKDC-206ENST00000536429 SKIV2LQ15477 1246 aaKnown RBP14.58□□□□□ -0.08
PRKDC-206ENST00000536429 SPECC1Q5M775 1068 aa14.58□□□□□ -0.08
PRKDC-206ENST00000536429 SPOUT1Q5T280 376 aaKnown RBP14.58□□□□□ -0.08
PRKDC-206ENST00000536429 CDCA2Q69YH5 1023 aaPredicted RBP14.58□□□□□ -0.08
PRKDC-206ENST00000536429 RINT1Q6NUQ1 792 aa14.58□□□□□ -0.08
PRKDC-206ENST00000536429 USP49Q70CQ1 688 aa14.58□□□□□ -0.08
PRKDC-206ENST00000536429 CABP7Q86V35 215 aa14.58□□□□□ -0.08
PRKDC-206ENST00000536429 SMG8Q8ND04 991 aaKnown RBP14.58□□□□□ -0.08
PRKDC-206ENST00000536429 SPPL3Q8TCT6 385 aa14.58□□□□□ -0.08
PRKDC-206ENST00000536429 USP28Q96RU2 1077 aa14.58□□□□□ -0.08
PRKDC-206ENST00000536429 C11orf84Q9BUA3 381 aaPredicted RBP14.58□□□□□ -0.08
PRKDC-206ENST00000536429 PLVAPQ9BX97 442 aa14.58□□□□□ -0.08
PRKDC-206ENST00000536429 NFKBIZQ9BYH8 718 aa14.58□□□□□ -0.08
PRKDC-206ENST00000536429 PCDHGC5Q9Y5F6 944 aa14.58□□□□□ -0.08
PRKDC-206ENST00000536429 HOXA2O43364 376 aa14.57□□□□□ -0.08
PRKDC-206ENST00000536429 ZNF623O75123 536 aa14.57□□□□□ -0.08
PRKDC-206ENST00000536429 BMP15O95972 392 aa14.57□□□□□ -0.08
PRKDC-206ENST00000536429 TFF2Q03403 129 aa14.57□□□□□ -0.08
PRKDC-206ENST00000536429 MAPK7Q13164 816 aa14.57□□□□□ -0.08
PRKDC-206ENST00000536429 PKP1Q13835 747 aa14.57□□□□□ -0.08
PRKDC-206ENST00000536429 AGMOQ6ZNB7 445 aa14.57□□□□□ -0.08
PRKDC-206ENST00000536429 C1orf186Q6ZWK4 172 aa14.57□□□□□ -0.08
PRKDC-206ENST00000536429 ABI1Q8IZP0 508 aa14.57□□□□□ -0.08
PRKDC-206ENST00000536429 COLGALT1Q8NBJ5 622 aa14.57□□□□□ -0.08
PRKDC-206ENST00000536429 CLIC6Q96NY7 704 aa14.57□□□□□ -0.08
PRKDC-206ENST00000536429 RNF39Q9H2S5 420 aa14.57□□□□□ -0.08
PRKDC-206ENST00000536429 RNF216Q9NWF9 866 aaPredicted RBP14.57□□□□□ -0.08
PRKDC-206ENST00000536429 FBXO2Q9UK22 296 aaPredicted RBP14.57□□□□□ -0.08
PRKDC-206ENST00000536429 HES2Q9Y543 173 aa14.57□□□□□ -0.08
PRKDC-206ENST00000536429 MUC3AQ02505 3323 aa14.57□□□□□ -0.08
PRKDC-206ENST00000536429 NPHP3-ACAD11A0A0J9YXS1 232 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 B4GALT3O60512 393 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 HIP1RO75146 1068 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 OFD1O75665 1012 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 SSBP05455 408 aaKnown RBP eCLIP14.56□□□□□ -0.08
PRKDC-206ENST00000536429 PLA2G4BP0C869 781 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 LIG1P18858 919 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 IRS1P35568 1242 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 NAMPTP43490 491 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 RAB27AP51159 221 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 SLC12A3P55017 1021 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 RAD51AP2Q09MP3 1159 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 KARSQ15046 597 aaKnown RBP14.56□□□□□ -0.08
PRKDC-206ENST00000536429 PTPROQ16827 1216 aa14.56□□□□□ -0.08
PRKDC-206ENST00000536429 TCEAL5Q5H9L2 206 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms